| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002K08 | Sequence | 318 | 006524 (11) | ref|XP_011093662.1| | 9e-24 | PREDICTED: mitochondrial-processing peptidase subunit alpha-like [Sesamum indic | 754 | 011325 (10) | ref|XP_009597035.1| | 1e-84 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana tomentos |
| JMFF005J22 | Sequence | 565 | 006524 (11) | emb|CDP03229.1| | 6e-63 | unnamed protein product [Coffea canephora] | 735 | 011325 (10) | ref|XP_009757181.1| | 2e-102 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana sylvestr |
| JMFF011F21 | Sequence | 413 | 006524 (11) | emb|CDP03229.1| | 1e-38 | unnamed protein product [Coffea canephora] | 673 | 011325 (10) | gb|KDO55872.1| | 8e-57 | hypothetical protein CISIN_1g0104472mg, partial [Citrus sinensis] gb|KDO55873.1| |
| JMFF012D18 | Sequence | 611 | 006524 (11) | emb|CDP03229.1| | 3e-82 | unnamed protein product [Coffea canephora] | 759 | 011325 (10) | ref|XP_009757181.1| | 4e-75 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana sylvestr |
| JMFF042B15 | Sequence | 649 | 006524 (11) | emb|CDP03229.1| | 2e-80 | unnamed protein product [Coffea canephora] | 571 | 011325 (10) | gb|KDO55872.1| | 9e-40 | hypothetical protein CISIN_1g0104472mg, partial [Citrus sinensis] gb|KDO55873.1| |
| JMFF043D10 | Sequence | 645 | 006524 (11) | emb|CDP03229.1| | 4e-81 | unnamed protein product [Coffea canephora] | 392 | 011325 (10) | |||
| JMFS076H11 | Sequence | 592 | 006524 (11) | ref|XP_011093662.1| | 1e-71 | PREDICTED: mitochondrial-processing peptidase subunit alpha-like [Sesamum indic | |||||
| JMFS125H09 | Sequence | 576 | 006524 (11) | emb|CDP03229.1| | 3e-82 | unnamed protein product [Coffea canephora] | |||||
| JMSF007G12 | Sequence | 279 | 006524 (11) | 796 | 011325 (10) | ref|XP_009597035.1| | 3e-72 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana tomentos | |||
| JMSF023P17 | Sequence | 663 | 006524 (11) | emb|CDP03229.1| | 3e-82 | unnamed protein product [Coffea canephora] | 773 | 011325 (10) | ref|XP_009757181.1| | 1e-65 | PREDICTED: mitochondrial-processing peptidase subunit alpha [Nicotiana sylvestr |
| JMSF051D11 | Sequence | 662 | 006524 (11) | emb|CDP03229.1| | 8e-82 | unnamed protein product [Coffea canephora] | 707 | 011325 (10) | gb|KDO55872.1| | 6e-55 | hypothetical protein CISIN_1g0104472mg, partial [Citrus sinensis] gb|KDO55873.1| |
This contig is upended
. : . : . : . : . : . :
JMFS076H11+ TACAAGGAGCTCCACCATGTG
____________________________________________________________
consensus TACAAGGAGCTCCACCATGTG
. : . : . : . : . : . :
JMFS076H11+ AGGAACATATG-TTTCAAAGCATCATAAGTATAAGTCATTTGTTCTCTTGAGACAGCAGC
JMFF042B15+ CATATGTTTTCAAAGCATCATAAGTATAAGTCATTTGTCTTCTGNAGGCAGCAGC
JMFS125H09+ ATATGTTTTCAAAGCATCATAAGTATAAGTCATTTGTTCTCTTGAGGCAGCAGC
JMFF012D18+ CATATGTTTTCAAAGCATCATAAGTATAAGTCATTTGTTCTCTTGAGGCAGCAGC
JMSF051D11+ CATATGTTTTCAAAGCATCATAAGTATAAGTCATTTGTTCTCTTGAGGCAGCAGC
JMFF043D10+ TTTCAAAGCATCATAAGTATAAGTCATTTGTTCTCTTGAGGCAGCAGC
JMSF023P17+ TTTCAAAGCATCATAAGTATAAGTCATTTGTTCTCTTGAGGCAGCAGC
____________________________________________________________
consensus AGGAACATATGTTTTCAAAGCATCATAAGTATAAGTCATTTGTTCTCTTGAGGCAGCAGC
. : . : . : . : . : . :
JMFS076H11+ TTGAACACTACCACCAATAGCTTCAACTTCTCGGACAACACGCAAGTGGCTGCGATTCAA
JMFF042B15+ TTGAACACTACCACCAATAGCTTCAACTTCTCGGACAACACGCAAGTGGCTGCGATTCAA
JMFS125H09+ TTGAACACTACCACCAATAGCTTCAACTTCTCGGACAACACGCAAGTGGCTGCGATTCAA
JMFF012D18+ TTGAACACTACCACCAATAGCTTCAACTTCTCGGACAACACGCAAGTGGCTGCGATTCAA
JMFF005J22+ GACAACACGCAAGTGGCTGCGATTCAA
JMSF051D11+ TTGAACACTACCACCAATAGCTTCAACTTCTCGGACAACACGCAAGTGGCTGCGATTCAA
JMFF043D10+ TTGAACACTACCACCAATAGCTTCAACTTCTCGGACAACACGCAAGTGGCTGCGATTCAA
JMSF023P17+ TTGAACACTACCACCAATAGCTTCAACTTCTCGGACAACACGCAAGTGGCTGCGATTCAA
____________________________________________________________
consensus TTGAACACTACCACCAATAGCTTCAACTTCTCGGACAACACGCAAGTGGCTGCGATTCAA
. : . : . : . : . : . :
JMFS076H11+ TGTGCTTTTGAAAGCCATTCGTTCCAATATATGTCAGGCCCCAAATAATGCTGGTTTTTC
JMFF042B15+ TGTGCTTTTGAAAGCCATTCGTTCCAAGAGATGTGAGGCCCCAAATGATGCTGGTTTTTC
JMFS125H09+ TGTGCTTTTGAAAGCCATTCGTTCCAAGAGATGTGAGGCCCCAAATGATGCTGGTTTTTC
JMFF012D18+ TGTGCTTTTGAAAGCCATTCGTTCCAAGAGATGTGAGGCCCCAAATGATGCTGGTTTTTC
JMFF005J22+ TGTGCTTTTGAAAGCCATTCGTTCCAAGAGATGTGAGGCCCCAAATGATGCTGGTTTTTC
JMSF051D11+ TGTGCTTTTGAAAGCCATTCGTTCCAAGAGATGTGAGGCCCCAAATGATGCTGGTTTTTC
JMFF043D10+ TGTGCTTTTGAAAGCCATTCGTTCCAAGAGATGTGAGGCCCCAAATGATGCTGGTTTTTC
JMSF023P17+ TGTGCTTTTGAAAGCCATTCGTTCCAAGAGATGTGAGGCCCCAAATGATGCTGGTTTTTC
____________________________________________________________
consensus TGTGCTTTTGAAAGCCATTCGTTCCAAGAGATGTGAGGCCCCAAATGATGCTGGTTTTTC
. : . : . : . : . : . :
JMFS076H11+ ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
JMFF011F21+ TCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
JMFF042B15+ ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
JMFS125H09+ ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
JMFF012D18+ ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
JMFF005J22+ ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
JMSF051D11+ ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
JMFF043D10+ ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
JMSF023P17+ ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
____________________________________________________________
consensus ATAGATTGATCCACTGTCAACATATAATCCAACTGAGGCAGCCGGGCTCGCTGATGTTTC
. : . : . : . : . : . :
JMFS076H11+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
JMFF011F21+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
JMFF002K08+ TCCCAGGTTCAACATG
JMFF042B15+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
JMFS125H09+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
JMFF012D18+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
JMFF005J22+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
JMSF051D11+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
JMFF043D10+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
JMSF023P17+ TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
____________________________________________________________
consensus TGATGCTATTTTAAGACCATTTGGCAAGGTTGTAATTTTGGTACTCCCAGGTTCAACATG
. : . : . : . : . : . :
JMFS076H11+ ATCGGGTAATGGAGGTGGCAGAGTACCACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
JMFF011F21+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGAGGAAAGTCTAGAGGAGGGAGGGC
JMFF002K08+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
JMFF042B15+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
JMFS125H09+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
JMFF012D18+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
JMFF005J22+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
JMSF051D11+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
JMFF043D10+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
JMSF023P17+ ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
____________________________________________________________
consensus ATCGGGTAATGGAGGTGGCAGAGTAACACCCTTTAGTGGAAAGTCTAGAGGAGGGAGGGC
. : . : . : . : . : . :
JMFS076H11+ ACTAGACCGTTCACCAGTTATCCAGCTAAATAGGCCACCACAGGATGAATTTGTTGCAAC
JMFF011F21+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMFF002K08+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMFF042B15+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMFS125H09+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMFF012D18+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMFF005J22+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMSF051D11+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMFF043D10+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMSF007G12+ CCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
JMSF023P17+ ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
____________________________________________________________
consensus ACTAGACCGTTCACCAGTTAACCAGCTAAATAGGCCACCAGAGGATGAATTTGTTGCAAC
. : . : . : . : . : . :
JMFS076H11+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTAATGCTGGCCCGGCCCTTGAGGGCTCT
JMFF011F21+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMFF002K08+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMFF042B15+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMFS125H09+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMFF012D18+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMFF005J22+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMSF051D11+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMFF043D10+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMSF007G12+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
JMSF023P17+ AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
____________________________________________________________
consensus AGCAGTCGAACTTGCAAATCTGGTCAATGCCCTATTGCTGGCCCGGCCCTTGAGGGCTCT
. : . : . : . : . : . :
JMFS076H11+ GGCGCTATAAGCCGCGGTTCTATACATGATTCCGCCGATCTATTGATGAGTGAGGCGGTG
JMFF011F21+ GGCGCGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMFF002K08+ GGCGCGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMFF042B15+ GGCGCGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMFS125H09+ GGCGCGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMFF012D18+ GGCGCGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMFF005J22+ GGCGCGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMSF051D11+ GGCGAGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMFF043D10+ GGCGCGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMSF007G12+ GGCGAGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
JMSF023P17+ GGCGAGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
____________________________________________________________
consensus GGCGCGAGAAGCCGCGGTTCTATACATGATTCCGGCGATCTATTGATGAGTGAGGCGGTG
. : . : . : . : . : . :
JMFS076H11+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTC
JMFF011F21+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
JMFF002K08+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
JMFF042B15+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
JMFS125H09+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTG
JMFF012D18+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
JMFF005J22+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
JMSF051D11+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
JMFF043D10+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
JMSF007G12+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
JMSF023P17+ GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
____________________________________________________________
consensus GAGAAAGCTCTGGAAGATGCGGAGAGTCAGTCCGAGGGTTTGGGATGAACGGCGGAGGAG
. : . : . : . : . : . :
JMFF011F21+ ATGAAAGAAAGAGGCTTTGC
JMFF002K08+ AT
JMFF042B15+ ATGAAAGAAAGAGGCTTTGCGAGTTGGTTGCCTTTTGGGGGCTTGAAGACCGGC
JMFF012D18+ ATGAAAGAAAGAG
JMFF005J22+ ATGAAAGAAAGAGGCTTTGCGAGTTGGTTGCCTTTTGGGGGCTTGAAGACCGGCGAA
JMSF051D11+ ATGAAAGAAAGAGGCTTTGCGAGTTGGTTGCCTTTTGGGGGCTTGAAGACCGGCGAA
JMFF043D10+ ATGAAAGAAAGAGGCTTTGCGAGTTGGTTGCCTTTTGGGGGCTTGAAGACCGGC
JMSF007G12+ ATGAAAGAAAGAGGCTTTGCGAGTTGGTTGCCTTTTGGGGGCTTGAAGACCGGCGAA
JMSF023P17+ ATGAAAGAAAGAGGCTTTGCGAGTTGGTTGCCTTTTGGGGGCTTGAAGACCGGCGAATTC
____________________________________________________________
consensus ATGAAAGAAAGAGGCTTTGCGAGTTGGTTGCCTTTTGGGGGCTTGAAGACCGGCGAATTC