Contig 006514:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025D13Sequence557006514 (12)ref|XP_009790189.1|179PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]687006514 (12)ref|XP_009790189.1|195PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]
JMFF029D20Sequence414006514 (12)ref|XP_009790189.1|100PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]738006514 (12)ref|XP_009790189.1|187PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]
JMFN043O05Sequence624006514 (12)ref|XP_009790189.1|206PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]
JMSF009O19Sequence236006514 (12)ref|XP_009790189.1|56.6PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]755006514 (12)ref|XP_009620958.1|208PREDICTED: uncharacterized protein LOC104112673 [Nicotiana tomentosiformis]
JMSF018H11Sequence514006514 (12)ref|XP_009790189.1|122PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]757020358ref|XP_009790189.1|174PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]
JMSF022K20Sequence642006514 (12)ref|XP_009790189.1|198PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]753006514 (12)ref|XP_009620958.1|209PREDICTED: uncharacterized protein LOC104112673 [Nicotiana tomentosiformis]
JMSF023L05Sequence654006514 (12)ref|XP_009790189.1|204PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]730006514 (12)ref|XP_009790189.1|195PREDICTED: uncharacterized protein LOC104237694 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF029D20- AAG
                      ____________________________________________________________
consensus AAG
 
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rJMFF029D20- CATCAAGAATCTATGCAAGAAGAAANAAGACTTCAAAATTTTCATTACAGGAGCATAAAG
                      ____________________________________________________________
consensus CATCAAGAATCTATGCAAGAAGAAANAAGACTTCAAAATTTTCATTACAGGAGCATAAAG
 
. : . : . : . : . : . :
rJMFF029D20- ATGAGATCTTTATCTTTATATCCGGGCAAAAATATTTCGTTCCCGTGAGGGAGATGATCG
rJMFF025D13- TGAGATCTTTATCTTTATATCCGGGCAAAAATATTTCGTTCCCGTGAGGGAGATGATCG
rJMSF023L05- TGAGATCTTTATCTTTATATCCGGGCAAAAATATTTCGTTCCCGTGAGGGAGATGATCG
rJMSF022K20- AAATATTTCGTTCCCGTGAGGGAGATGATCG
rJMSF009O19- TATTTCGTTCCCGTGAGGGAGATGATCG
                      ____________________________________________________________
consensus ATGAGATCTTTATCTTTATATCCGGGCAAAAATATTTCGTTCCCGTGAGGGAGATGATCG
 
. : . : . : . : . : . :
rJMFF029D20- TCGTCGTTGACGTTGTTGTTTCTCAGGCGTACCGTATAAAGAAGTAATATTCCGGAGTTA
rJMFF025D13- TCGTCGTTGACGTTGTTGTTTCTCAGGCGTACCGTATAAAGAAGTAATATTCCGGAGTTA
rJMSF023L05- TCGTCGTTGACGTTGTTGTTTCTCAGGCGTACCGTATAAAGAAGTAATATTCCGGAGTTA
rJMSF022K20- TCGTCGTTGACGTTGTTGTTTCTCAGGCGTACCGTATAAAGAAGTAATATTCCGGAGTTA
rJMSF009O19- TCGTCGTTGACGTTGTTGTTTCTCAGGCGTACCGTATAAAGAAGTAATATTCCGGAGTTA
                      ____________________________________________________________
consensus TCGTCGTTGACGTTGTTGTTTCTCAGGCGTACCGTATAAAGAAGTAATATTCCGGAGTTA
 
. : . : . : . : . : . :
rJMFF029D20- TACTTTATACACTAGATCGAATATATACATCGCTACTATATATAATCCATAATCCCCATA
rJMFF025D13- TACTTTATACACTAGATCGAATATATACATCGCTACTATATATAATCCATAATCCCCATA
rJMSF023L05- TACTTTATACACTAGATCGAATATATACATCGCTACTATATATAATCCATAATCCCCATA
rJMSF022K20- TACTTTATACACTAGATCGAATATATACATCGCTACTATATATAATCCATAATCCCCATA
rJMSF009O19- TACTTTATACACTAGATCGAATATATACATCGCTACTATATATAATCCATAATCCCCATA
                      ____________________________________________________________
consensus TACTTTATACACTAGATCGAATATATACATCGCTACTATATATAATCCATAATCCCCATA
 
. : . : . : . : . : . :
rJMFF029D20- CTGGATTAACTGGGAATCAGGGATTAAGGTTTAAGTTTAGTAGGATT--TATTTATTTAT
rJMFF025D13- CTGGATTAACTGGGAATCAGGGATTAAGGTTTAAGTTTAGTAGGATTTATATTTATTTAT
rJMSF023L05- CTGGATTAACTGGGAATCAGGGATTAAGGTTTAAGTTTAGTAGGATTTATATTTATTTAT
rJMSF022K20- CTGGATTAACTGGGAATCAGGGATTAAGGTTTAAGTTTAGTAGGATTTATATTTATTTAT
rJMSF009O19- CTGGATTAACTGGGAATCAGGGATTAAGGTTTAAGTTTAGTAGGATTTATATTTATTTAT
                      ____________________________________________________________
consensus CTGGATTAACTGGGAATCAGGGATTAAGGTTTAAGTTTAGTAGGATTTATATTTATTTAT
 
. : . : . : . : . : . :
rJMFF029D20- TATGCGCCGTTGCCGTCGCCGTCGCCGGCGAGTTATTATGGTTCAGATGGCCAGAATTCC
rJMFF025D13- TATGCGCCGTTGCCGTCGCCGTCGCCGGCGAGTTATTATGGTTCAGATGGCCAGAATTCC
rJMSF023L05- TATGCGCCGTTGCCGTCGCCGTCGCCGGCGAGTTATTATGGTTCAGATGGCCAGAATTCC
rJMSF022K20- TATGCGCCGTTGCCGTCGCCGTCGCCGGCGAGTTATTATGGTTCAGATGGCCAGAATTCC
rJMSF009O19- TATGCGCCGTTGCCGTCGCCGTCGCCGGCGAGTTATTATGGTTCAGATGGCCAGAATTCC
                      ____________________________________________________________
consensus TATGCGCCGTTGCCGTCGCCGTCGCCGGCGAGTTATTATGGTTCAGATGGCCAGAATTCC
 
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rJMFF029D20- GGTTGAAAACATCTGACCGTTTGTATAAGGGGAGGTTGAAATATCGGCGGACCTAGAAAT
rJMFF025D13- GGTTGAAAACATCTGACCGTTTGTATAAGGGGAGGTTGAAATATCGGCGGACCTAGAAAT
rJMSF023L05- GGTTGAAAACATCTGACCGTTTGTATAAGGGGAGGTTGAAATATCGGCGGACCTAGAAAT
rJMSF022K20- GGTTGAAAACATCTGACCGTTTGTATAAGTGGAGGTTGAAATATCGGCGGACCTAGAAAT
rJMSF009O19- GGTTGAAAACATCTGACCGTTTGTATAAGGGGAGGTTGAAATATCGGCGGACCTAGAAAT
                      ____________________________________________________________
consensus GGTTGAAAACATCTGACCGTTTGTATAAGGGGAGGTTGAAATATCGGCGGACCTAGAAAT
 
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rJMFF029D20- CTCAGAACTGCACTTCTCTTTGTGCTCGTCCATCACTATCTGCCGATATCTACACTCCGT
rJMFF025D13- CTCAGAACTGCACTTCTCTTTGTGCTCGTCCATCACTATCTGCCGATATCTACACTCCGT
rJMSF023L05- CTCAGAACTGCACTTCTCTTTGTGCTCGTCCATCACTATCTGCCGATATCTACACTCCGT
rJMSF022K20- CTCAGAACTGCACTTCTCTTTGTGCTCGTCCATCACTATCTGCCGATATCTACACTCCGT
rJMSF009O19- CTCAGAACTGCACTTCTCTTTGTGCTCGTCCATCACTATCTGCCGATATCTACACTCCGT
                      ____________________________________________________________
consensus CTCAGAACTGCACTTCTCTTTGTGCTCGTCCATCACTATCTGCCGATATCTACACTCCGT
 
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rJMFF029D20- GCTACAAAACGCCGTTTCACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
rJMFF025D13- GCTACAAAACGCCGTTTCACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
rJMSF023L05- GCTACAAAACGCCGTTTCACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
rJMSF022K20- GCTACAAAACGCCGTTTCACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
rJMSF009O19- GCTACAAAACGCCGTTTCACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
JMFN043O05+ ACAAAACGCCGTTTCACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
JMSF023L05+ AAACGCCGTTTCACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
JMFF025D13+ TGCCGGAGAGTTTTTTACG
JMSF022K20+ ACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
                      ____________________________________________________________
consensus GCTACAAAACGCCGTTTCACCCCTGTACATGTAAATGTCTTTGCCGGAGAGTTTTTTACG
 
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rJMFF029D20- GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
rJMFF025D13- GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
rJMSF023L05- GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
rJMSF022K20- GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
rJMSF009O19- GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
JMFN043O05+ GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
JMSF023L05+ GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
JMFF025D13+ GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
JMSF022K20+ GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
                      ____________________________________________________________
consensus GCATAAATGGCAGGAGCTGAGGAAATCGGAATCCGGGCACGCCGGAATATCGGCGAGCCT
 
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rJMFF029D20- CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
rJMFF025D13- CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
rJMSF023L05- CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
rJMSF022K20- CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
rJMSF009O19- CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
JMFN043O05+ CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
JMSF023L05+ CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
JMFF025D13+ CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
JMSF018H11+ TCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
JMSF022K20+ CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
                      ____________________________________________________________
consensus CGCCGGAGATATCGTGAAAACGCTCGGGCGGTTGCTTCTGGAGCTCGGGACTTCGCCGTA
 
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rJMFF029D20- GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGAATACTCTTCTTC
rJMFF025D13- GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
rJMSF023L05- GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
rJMSF022K20- GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
rJMSF009O19- GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
JMFN043O05+ GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
JMSF023L05+ GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
JMFF025D13+ GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
JMSF018H11+ GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
JMSF022K20+ GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
                      ____________________________________________________________
consensus GACTCTAGTGTACGGTTTGTTGTCGGAGCCGCGGCAAGTCACCACCGTATACTCTTCTTC
 
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rJMFF029D20- TTCTTCTTCTTCCTCCA
rJMFF025D13- TTCTTCTTCTTCCTCCAGGCTCCCTCTA
rJMSF023L05- TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
rJMSF022K20- TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
rJMSF009O19- TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
JMFN043O05+ TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
JMSF023L05+ TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
JMFF025D13+ TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
JMSF018H11+ TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
JMFF029D20+ CTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
JMSF022K20+ TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
                      ____________________________________________________________
consensus TTCTTCTTCTTCCTCCAGGCTCCCTCTAAAACTCCCCACAATTCTCGCCGGAATCCTCCC
 
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rJMSF023L05- GGAGCTC
rJMSF022K20- GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCACTTTTC
rJMSF009O19- GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCANTTTTCTCCC
JMFN043O05+ GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCACTTTTCTCCC
JMSF023L05+ GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCACTTTTCTCCC
JMFF025D13+ GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCACTTTTCTCCC
JMSF018H11+ GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCACTTTTCTCCC
JMFF029D20+ GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCACTTTTCTCCC
JMSF022K20+ GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCACTTTTCTCCC
                      ____________________________________________________________
consensus GGAGCTCACCGGAATCGGCACCGACCGCCGCGAATTCCGGCTACACACCACTTTTCTCCC
 
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rJMSF009O19- CGCACTC
JMFN043O05+ CGCACTCTCCCCTCTCTCACAAGATTTTTCCAGGGCGGCAACAATCGCCAGCCCAACCCC
JMSF023L05+ CGCACTCTCCCCTCTCTCACAAGATTTTTCCAGGGCGGCAACAATCGCCAGCCCAACCCC
JMFF025D13+ CGCACTCTCCCCTCTCTCACAAGATTTTTCCAGGGCGGCAACAATCGCCAGCCCAACCCC
JMSF018H11+ CGCACTCTCCCCTCTCTCACAAGATTTTTCCAGGGCGGCAACAATCGCCAGCCCAACCCC
JMFF029D20+ CGCACTCTCCCCTATCTCACAAGATTTTTCCAGGGCGGCAACAATCGCCAGCCCAACCCC
JMSF022K20+ CGCACTCTCCCCTCTCTCACAAGATTTTTCCAGGGCGGCAACAATCGCCAGCCCAACCCC
                      ____________________________________________________________
consensus CGCACTCTCCCCTCTCTCACAAGATTTTTCCAGGGCGGCAACAATCGCCAGCCCAACCCC
 
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JMFN043O05+ TCCAAGATCGAAACTTTTTAGCCCTCTCGGCGACTGAACCTTGTGGTCCAAAGGACTTCT
JMSF023L05+ TCCAAGATCGAAACTTTTTAGCCCTCTCGGCGACTGAACCTTGTGGTCCAAAGGACTTCT
JMFF025D13+ TCCAAGATCGAAACTTTTTAGCCCTCTCGGCGACTGAACCTTGTGGTCCAAAGGACTTCT
JMSF018H11+ TCCAAGATCGAAACTTTTTAGCCCTCTCGGCGACTGAACCTTGTGGTCCAAAGGACTTCT
JMSF009O19+ CCAAGATCGAAACTTTTTAGCCCTCTCGGCGACTGAACCTTGTGGTCCAAAGGACTTCT
JMFF029D20+ TCCAAGATCGAAACTTTTTAGCCCTCTCGGCGACTGAACCTTGTGGTCCAAAGGACTTCT
JMSF022K20+ TCCAAGATCGAAACTTTTTAGCCCTCTCGGCGACTGAACCTTGTGGTCCAAAGGACTTCT
                      ____________________________________________________________
consensus TCCAAGATCGAAACTTTTTAGCCCTCTCGGCGACTGAACCTTGTGGTCCAAAGGACTTCT
 
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JMFN043O05+ CGGGCTGGTCGGCCCGCCGGCTATCTTTCCGGCCACCGGGTTTAATCTCTTGCCCAGCAT
JMSF023L05+ CGGGCTGGTCGGCCCGCCGGCTATCTTTCCGGCCACCGGGTTTAATCTCTTGCCCAGCAT
JMFF025D13+ CGGGCTGGTCGGCCCGCCGGCTATCTTTCCGGCCACCGGGTTTAATCTCTTGCCCAGCAT
JMSF018H11+ CGGGCTGGTCGGCCCGCCGGCTATCTTTCCGGCCACCGGGTTTAATCTCTTGCCCAGCAT
JMSF009O19+ CGGGCTGGTCGGCCCGCCGGCTATCTTTCCGGCCACCGGGTTTAATCTCTTGCCCAGCAT
JMFF029D20+ CGGGCTGGTCGGCCCGCCGGCTATCTTTCCGGCCACCGGGTTTAATCTCTTGCCCAGCAT
JMSF022K20+ CGGGCTGGTCGGCCCGCCGGCTATCTTTCCGGCCACCGGGTTTAATCTCTTGCCCAGCAT
                      ____________________________________________________________
consensus CGGGCTGGTCGGCCCGCCGGCTATCTTTCCGGCCACCGGGTTTAATCTCTTGCCCAGCAT
 
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JMFN043O05+ AGCTATGGCGGATTTTTGTTCTGGTTTGAAGGGATAGAAAATTGAGTTCTTTTGGAGTGG
JMSF023L05+ AGCTATGGCGGATTTTTGTTCTGGTTTGAAGGGATAGAAAATTGAGTTCTTTTGGAGTGG
JMFF025D13+ AGCTATGGCGGATTTTTGTTCTGGTTTGAAGGGATAGAAAATTGAGTTCTTTTGGAGT
JMSF018H11+ AGCTATGGCGGATTTTTGTTCTGGTTTGAAGGGATAGAAAATTGAGTTCTTTTGGAGTGG
JMSF009O19+ AGCTATGGCGGATTTTTGTTCTGGTTTGAAGGGATAGAAAATTGAGTTCTTTTGGAGTGG
JMFF029D20+ AGCTATGGCGGATTTTTGTTCTGGTTTGAAGGGATAGAAAATTGAGTTCTTTTGGAGTGG
JMSF022K20+ AGCTATGGCGGATTTTTGTTCTGGTTTGAAGGGATAGAAAATTGAGTTCTTTTGGAGTGG
                      ____________________________________________________________
consensus AGCTATGGCGGATTTTTGTTCTGGTTTGAAGGGATAGAAAATTGAGTTCTTTTGGAGTGG
 
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JMFN043O05+ AAAATGGAGAGAGTTGCAGAGGTGATT
JMSF023L05+ AAAATGGAGAGAGTTGCAGAGGTGATTTTATACACAGTATTGAAGAAGATGGAGTTG
JMSF018H11+ AAAATGGAGAGAGTTGCAGAGGTGATTTTATACACAGTATTGAAGAAGATGGAGTTG
JMSF009O19+ AAAATGGAGAGAGTTGCAGAGGTGATTTTATACACAGTATTGAAGAAGATGGAGT
JMFF029D20+ AAAATGGAGAGAGTTGCAGAGGTGATTTTATACACAGTATTGAAGAAGATGGAGTTG
JMSF022K20+ AAAATGGAGAGAGTTGCAGAGGTGATTTTATACACAGTATTGAAGAAGATGGAGTTGTTC
                      ____________________________________________________________
consensus AAAATGGAGAGAGTTGCAGAGGTGATTTTATACACAGTATTGAAGAAGATGGAGTTGTTC