Contig 006487:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019G12Sequence496006487 (2)ref|XP_009605166.1|3e-51PREDICTED: aspartic proteinase-like protein 1 [Nicotiana tomentosiformis]809001068 (4)emb|CDP01851.1|6e-86unnamed protein product [Coffea canephora]
JMSF031O11Sequence678006487 (2)ref|XP_009767400.1|4e-79PREDICTED: aspartic proteinase-like protein 1 [Nicotiana sylvestris]762001068 (4)emb|CDP01851.1|2e-73unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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JMSF031O11+                            TAGGTGCAAGACGTCGGCAACCAATATGCCTTGTGACGAGGTG
                      ____________________________________________________________
consensus                              TAGGTGCAAGACGTCGGCAACCAATATGCCTTGTGACGAGGTG
 
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JMSF031O11+           TTAAAAGAGAGATATCCAGTTTTATAGCCACAAGCACTGGGATCAGCTGATGAACAAAGT
                      ____________________________________________________________
consensus             TTAAAAGAGAGATATCCAGTTTTATAGCCACAAGCACTGGGATCAGCTGATGAACAAAGT
 
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JMSF031O11+           CCTCTTCGTGCTCGTTTACACAGGGTACCATTGCAGGGAACGATCTTGCTCGTGGATGAG
                      ____________________________________________________________
consensus             CCTCTTCGTGCTCGTTTACACAGGGTACCATTGCAGGGAACGATCTTGCTCGTGGATGAG
 
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JMSF031O11+           GCGTTGGGGCTATACATATTCAAATCTATTTCCTTTCCTCCTCCCAGTATAAGACGCCGT
JMSF019G12+                                                       CAGTATAAGACGCCGT
                      ____________________________________________________________
consensus             GCGTTGGGGCTATACATATTCAAATCTATTTCCTTTCCTCCTCCCAGTATAAGACGCCGT
 
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JMSF031O11+           TCACAGTTGCGGCAATTACATGGCACCCAAAACAGATCGCTACCAGTGTCCAGTGCCACC
JMSF019G12+           TCACAGTTGCGGCAATTACATGGCACCCAAAACAGATCGCTACCAGTGTCCAGTGCCACC
                      ____________________________________________________________
consensus             TCACAGTTGCGGCAATTACATGGCACCCAAAACAGATCGCTACCAGTGTCCAGTGCCACC
 
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JMSF031O11+           AAAAATGATAGAGGAGGCGTGCCCACAGTAACATTTGCATAGTGTAAGAATCCCAGACGA
JMSF019G12+           AAAAATGATAGAGGAGGCGTGCCCACAGTAACATTTGCATAGTGTAAGAATCCCAGACGA
                      ____________________________________________________________
consensus             AAAAATGATAGAGGAGGCGTGCCCACAGTAACATTTGCATAGTGTAAGAATCCCAGACGA
 
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JMSF031O11+           GATATCAGCACGGTCTCATTTCCAGCTTCGAAAGTAAGCAAGGCAGAATCACCGGAGTCT
JMSF019G12+           GATATCAGCACGGTCTCATTTCCAGCTTCGAAAGTAAGCAAGGCAGAATCACCGGAGTCT
                      ____________________________________________________________
consensus             GATATCAGCACGGTCTCATTTCCAGCTTCGAAAGTAAGCAAGGCAGAATCACCGGAGTCT
 
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JMSF031O11+           GCAGCGCGGTGACGCCCATGGGAAAGCCGGTACTTATCACGCGCCACCCAGGAGGAGTAG
JMSF019G12+           GCAGCGCGGTGACGCCCATGGGAAAGCCGGTACTTATCACGCGCCACCCAGGAGGAGTAG
                      ____________________________________________________________
consensus             GCAGCGCGGTGACGCCCATGGGAAAGCCGGTACTTATCACGCGCCACCCAGGAGGAGTAG
 
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JMSF031O11+           TAGTCGACGCTACCTTTTTCCGACAACCCTTGGAGGTCCAAAATACCGATGACCGGATCC
JMSF019G12+           TAGTCGACGCTACCTTTTTCCGACAACCCTTGGAGGTCCAAAATACCGATGACCGGATCC
                      ____________________________________________________________
consensus             TAGTCGACGCTACCTTTTTCCGACAACCCTTGGAGGTCCAAAATACCGATGACCGGATCC
 
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JMSF031O11+           GAGTAACGGTGGTGGATGTCGAACCCGAATGTCCCAAAGGCTTCGCCGGACTCCAACAAC
JMSF019G12+           GAGTAACGGTGGTGGATGTCGAACCCGAATGTCCCAAAGGCTTCGCCGGACTCCAACAAC
                      ____________________________________________________________
consensus             GAGTAACGGTGGTGGATGTCGAACCCGAATGTCCCAAAGGCTTCGCCGGACTCCAACAAC
 
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JMSF031O11+           TGTAGAACCCAAACCGTCGCCATAAAAACAACGGTAGCTAAGAAATAAGAATGAGCTGCC
JMSF019G12+           TGTAGAACCCAAACCGTCGCCATAAAAACAACGGTAGCTAAGAAATAAGAATGAGCTGCC
                      ____________________________________________________________
consensus             TGTAGAACCCAAACCGTCGCCATAAAAACAACGGTAGCTAAGAAATAAGAATGAGCTGCC
 
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JMSF031O11+           ATGGCTAGCTAAGAATACGGAGAACTGAACAGAC                          
JMSF019G12+           ATGGCTAGCTAAGAATACGGAGAACTGAACAGACAGAAAACTCTGAAAGTGTATTTGGTC
                      ____________________________________________________________
consensus             ATGGCTAGCTAAGAATACGGAGAACTGAACAGACAGAAAACTCTGAAAGTGTATTTGGTC