| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF019G11 | Sequence | 487 | 006482 (7) | 679 | 013691 (4) | ref|XP_009603675.1| | 5e-73 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] | |||
| JMFS042A03 | Sequence | 612 | 006482 (7) | gb|KDO76504.1| | 3e-35 | hypothetical protein CISIN_1g0134021mg, partial [Citrus sinensis] | |||||
| JMFS131A07 | Sequence | 622 | 006482 (7) | gb|KDO76504.1| | 3e-23 | hypothetical protein CISIN_1g0134021mg, partial [Citrus sinensis] | |||||
| JMFS151D10 | Sequence | 626 | 006482 (7) | ref|XP_011022514.1| | 7e-42 | PREDICTED: probable polygalacturonase [Populus euphratica] | |||||
| JMSF018O09 | Sequence | 325 | 006482 (7) | 771 | 013691 (4) | ref|XP_009603675.1| | 1e-96 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] | |||
| JMSF020B22 | Sequence | 654 | 006482 (7) | gb|KDO76504.1| | 2e-27 | hypothetical protein CISIN_1g0134021mg, partial [Citrus sinensis] | 775 | 013691 (4) | ref|XP_009603675.1| | 2e-101 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] |
| JMSF053K03 | Sequence | 642 | 006482 (7) | gb|KDO76504.1| | 3e-35 | hypothetical protein CISIN_1g0134021mg, partial [Citrus sinensis] | 896 | 013691 (4) | ref|XP_009603675.1| | 4e-123 | PREDICTED: probable polygalacturonase [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS151D10+ AGGCCAGTTTGTTGTATCCTGAGTAGCTTTGATGACAG
____________________________________________________________
consensus AGGCCAGTTTGTTGTATCCTGAGTAGCTTTGATGACAG
. : . : . : . : . : . :
JMFS151D10+ CATCTTTGTCCAAGTACAAAGTCATGTGGCTTGTAAGATTGAAAGGTCCGGTGAGATAAA
JMFS042A03+ AAGTACANAGTCATGTGGCTTGTAAGATTGAAAGGTCCGGTGAGATAAA
JMSF053K03+ AAGTACAAAGTCATGTGGCTTGTAAGATTGAAAGGTCCGGTGAGATAAA
JMSF020B22+ TCCGGTGAGATAAA
____________________________________________________________
consensus CATCTTTGTCCAAGTACAAAGTCATGTGGCTTGTAAGATTGAAAGGTCCGGTGAGATAAA
. : . : . : . : . : . :
JMFS151D10+ CGCCGGCCGGAATGTAAAGAAGAGTGCCGCCGCTTCTATTCAAATGCTGAATTTGATAAA
JMFS042A03+ CGCCGGCCGGAATGTAAAGAAGAGTGCCGCCGCTTCTATTCAAATGCTGAATTTGATAAA
JMSF053K03+ CGCCGGCCGGAATGTAAAGAAGAGTGCCGCCGCTTCTATTCAAATGCTGAATTTGATAAA
JMFS131A07+ CGGAATGTAAAGAAGAGTGCCGCCGCTTCTATTCAAATGCTGAATTTGATAAA
JMSF020B22+ CGCCGGCCGGAATGTAAAGAAGAGTGCCGCCGCTTCTATTCAAATGCTGAATTTGATAAA
____________________________________________________________
consensus CGCCGGCCGGAATGTAAAGAAGAGTGCCGCCGCTTCTATTCAAATGCTGAATTTGATAAA
. : . : . : . : . : . :
JMFS151D10+ TTGCTTCCATAAACGCCTTCGTATTCAACGTCTGGCCGTCTCCGACGCCGCCGAAGTCGG
JMFS042A03+ TTGCTTCCATAAACGCCTTCGTATTCAACGTCTGGCCGTCTCCGACGCCGCCGAAGTCGG
JMSF053K03+ TTGCTTCCATAAACGCCTTCGTATTCAACGTCTGGCCGTCTCCGACGCCGCCGAAGTCGG
JMFS131A07+ TTGCTTCCATAAACGCCTTCGTATTCAACGTCTGGCCGTCTCCGACGCCGCCGAAGTCGG
JMFF019G11+ CCGACGCCGCCGAAGTCGG
JMSF020B22+ TTGCTTCCATAAACGCCTTCGTATTCAACGTCTGGCCGTCTCCGACGCCGCCGAAGTCGG
____________________________________________________________
consensus TTGCTTCCATAAACGCCTTCGTATTCAACGTCTGGCCGTCTCCGACGCCGCCGAAGTCGG
. : . : . : . : . : . :
JMFS151D10+ CTATCGATATCCTATTGCTCCGCTCCCTCATCGGAACTATCCCGGAGCACGTTTCCCACT
JMFS042A03+ CTATCGATATCCTATTGCTCCGCTCCCTCATCGGAACTATCCCGGAGCACGTTTCCCACT
JMSF053K03+ CTATCGATATCCTATTGCTCCGCTCCCTCATCGGAACTATCCCGGAGCACGTTTCCCACT
JMFS131A07+ CTATCGATATCCTATTGCTCCGCTCCCTCATCGGAACTATCCCGGAGCACGTTTCCCACT
JMFF019G11+ CTATCGATATCCTATTGCTCCGCTCCCTCATCGGAA--ATCCCGGAGCACGTTTCCCACT
JMSF020B22+ CTATCGATATCCTATTGCTCCGCTCCCTCATCGGAACTATCCCGGAGCACGTTTCCCACT
____________________________________________________________
consensus CTATCGATATCCTATTGCTCCGCTCCCTCATCGGAACTATCCCGGAGCACGTTTCCCACT
. : . : . : . : . : . :
JMFS151D10+ CGCCCACCGCCGAGCAGGCCGCCAGTAGCAACACAGCCGCGCAGCAGGGTAAAATCGATC
JMFS042A03+ CGCCCACCGCCGAGCAGGCCGCCAGTAGCAACACAGCCGCGCAGCAGGGTAAAATCGATC
JMSF053K03+ CGCCCACCGCCGAGCAGGCCGCCAGTAGCAACACAGCCGCGCAGCAGGGTAAAATCGATC
JMFS131A07+ CGCCCACCGCCGAGCAGGCCGCCAGTAGCAACACAGCCGCGCAGCAGGGTAAAATCGATC
JMFF019G11+ CGCCCACCGCCGAGCAGGCCGCCAGTAGCAACACAGCCGCGCAGCAGGGTAAAATCGATC
JMSF020B22+ CGCCCACCGCCGAGCAGGCCGCCAGTAGCAACACAGCCGCGCAGCAGGGTAAAATCGATC
____________________________________________________________
consensus CGCCCACCGCCGAGCAGGCCGCCAGTAGCAACACAGCCGCGCAGCAGGGTAAAATCGATC
. : . : . : . : . : . :
JMFS151D10+ GGAAAAACCGACCCATCTTTGATCCGGAACAAAAGATTCAGACACTTCCCGGAGAAGAGT
JMFS042A03+ GGAAAAACCGACCCATCTTTGATCCGGAACAAAAGATTCAGACACTTCCCGGAGAAGAGT
JMSF053K03+ GGAAAAACCGACCCATCTTTGATCCGGAACAAAAGATTCAGACACTTCCCGGAGAAGAGT
JMFS131A07+ GGAAAAACCGACCCATCTTTGATCCGGAACAAAAGATTCAGACACTTCCCGGAGAAGAGT
JMFF019G11+ GGAAAAACCGACCCATCTTTGATCCGGAACAAAAGATTCAGACACTTCCCGGAGAAGAGT
JMSF020B22+ GGAAAAACCGACCCATCTTTGATCCGGAACAAAAGATTCAGACACTTCCCGGAGAAGAGT
____________________________________________________________
consensus GGAAAAACCGACCCATCTTTGATCCGGAACAAAAGATTCAGACACTTCCCGGAGAAGAGT
. : . : . : . : . : . :
JMFS151D10+ GTGGGTTTTACTAAAGATTTTACCTTTTACTTTTTCATAAAAACAGGAATCTTTGTCGGT
JMFS042A03+ GTGGGTTTTACTAAAGATTTTACCTTTTACTTTTTCATAAAAACAGGAATCTTTGTCGGT
JMSF053K03+ GTGGGTTTTACTAAAGATTTTACCTTTTACTTTTTCATAAAAACAGGAATCTTTGTCGGT
JMFS131A07+ GTGGGTTTTACTAAAGATTTTACCTTTTACTTTTTCATAAAAACAGGAATCTTTGTCGGT
JMFF019G11+ GTGGGTTTTACTAAAGATTTTACCTTTTACTTTTTCATAAAAACAGGAATCTTTGTCGGT
JMSF020B22+ GTGGGTTTTACTAAAGATTTTACCTTTTACTTTTTCATAAAAACAGGAATCTTTGTCGGT
JMSF018O09+ CATAAAAACAGGAATCTTTGTCGGT
____________________________________________________________
consensus GTGGGTTTTACTAAAGATTTTACCTTTTACTTTTTCATAAAAACAGGAATCTTTGTCGGT
. : . : . : . : . : . :
JMFS151D10+ GGGTTTTTGGGTTTGAACCTAGCAGCACATCCAAGAATTTGCTAAGTAATCGAACTACTA
JMFS042A03+ GGGTTTTTGGGTTTGAACCTAGCAGCACATCCAAGAATTTGCTAAGTAATCGAACTACTA
JMSF053K03+ GGGTTTTTGGGTTTGAACCTAGCAGCACATCCAAGAATTTGCTAAGTAATCGAACTACTA
JMFS131A07+ GGGTTTTTGGGTTTGAACCTAGCAGCACATCCAAGAATTTGCTAAGTAATCGAACTACTA
JMFF019G11+ GGGTTTTTGGGTTTGAACCTAGCAGCACATCCAAGAATTTGCTAAGTAATCGAACTACTA
JMSF020B22+ GGGTTTTTGGGTTTGAACCTAGCAGCACATCCAAGAATTTGCTAAGTAATCGAACTACTA
JMSF018O09+ GGGTTTTTGGGTTTGAACCTAGCAGCACATCCAAGAATTTGCTAAGTAATCGAACTACTA
____________________________________________________________
consensus GGGTTTTTGGGTTTGAACCTAGCAGCACATCCAAGAATTTGCTAAGTAATCGAACTACTA
. : . : . : . : . : . :
JMFS151D10+ AATGCAAGATAAAAAGATAACTTGTAAAGAATCAAGAAGAAAGGTTTCCAAGAGCGAAGA
JMFS042A03+ AATGCAAGATAAAAAGATAACTTGTAAAGAATCAAGAAGAAAGGTTTCCAAGAGCGAAGA
JMSF053K03+ AATGCAAGATAAAAAGATAACTTGTAAAGAATCAAGAAGAAAGGTTTCCAAGAGCGAAGA
JMFS131A07+ AATGCAAGATAAAAAGATAACTTGTAAAGAATCAAGAAGAAAGGTTTCCAAGAGCGAAGA
JMFF019G11+ AATGCAAGATAAAAAGATAACTTGTAAAGAATCAAGAAGAAAGGTTTCCAAGAGCGAAGA
JMSF020B22+ AATGCAAGATAAAAAGATAACTTGTAAAGAATCAAGAAGAAAGGTTTCCAAGAGCGAAGA
JMSF018O09+ AATGCAAGATAAAAAGATAACTTGTAAAGAATCAAGAAGAAAGGTTTCCAAGAGCGAAGA
____________________________________________________________
consensus AATGCAAGATAAAAAGATAACTTGTAAAGAATCAAGAAGAAAGGTTTCCAAGAGCGAAGA
. : . : . : . : . : . :
JMFS151D10+ ATCTGTGGTAATTACTTTAGGAAATGGAAATGAAAGAAGAGAAGAAAA
JMFS042A03+ ATCTGTGGTAATTACTTTAGGAAATGGAAATGAAAGAAGAGAAGAAAATGGGAAATGGGG
JMSF053K03+ ATCTGTGGTAATTACTTTAGGAAATGGAAATGAAAGAAGAGAAGAAAATGGGAAATGGGG
JMFS131A07+ ATCTGTGGTAATTACTTTAGGAAATGGAAATGAAAGAAGAGAAGAAAATGGGAAATGGGG
JMFF019G11+ ATCTGTGGTAATTACTTTAGGAAATGGAAATGAAAGAAGAGAAGAAAATGGGAAATGGGG
JMSF020B22+ ATCTGTGGTAATTACTTTAGGAAATGGAAATGAAAGAAGAGAAGAAAATGGGAAATGGGG
JMSF018O09+ ATCTGTGGTAATTACTTTAGGAAATGGAAATGAAAGAAGAGAAGAAAATGGGAAATGGGG
____________________________________________________________
consensus ATCTGTGGTAATTACTTTAGGAAATGGAAATGAAAGAAGAGAAGAAAATGGGAAATGGGG
. : . : . : . : . : . :
JMFS042A03+ TTTAAGATTCCGAAGTAACC
JMSF053K03+ TTTAAGATTCCGAAGTAACCTGGAGAATGGAGAAGAGGAAAATATTGTTTGC
JMFS131A07+ TTTAAGATTCCGAAGTAACCTGGAGAATGGAGAAGAGGAAAATATTGTTTGCAAGATTGG
JMFF019G11+ TTTAAGATTCCGAAGTAACCTGGAGAATGGAGAAGAGGAAAATATT
JMSF020B22+ TTTAAGATTCCGAAGTAACCTGGAGAATGGAGAAGAGGAAAATATTGTTTGCAAGATTGG
JMSF018O09+ TTTAAGATTCCGAAGTAACCTGGAGAATGGAGAAGAGGAAAATATTGTTTGCAAGATTGG
____________________________________________________________
consensus TTTAAGATTCCGAAGTAACCTGGAGAATGGAGAAGAGGAAAATATTGTTTGCAAGATTGG
. : . : . : . : . : . :
JMFS131A07+ AACTTTGAGAGAGATTTTAAAGAAATTTT
JMSF020B22+ AACTTTGAGAGAGATTTTAAAGAAATTTT
JMSF018O09+ AACTTTGAGAGAGATTTTAAAGAAATTTTGTGGCTGCTACCATGCTAATTGGGGGGTTCC
____________________________________________________________
consensus AACTTTGAGAGAGATTTTAAAGAAATTTTGTGGCTGCTACCATGCTAATTGGGGGGTTCC