| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMSF012B20 | Sequence | 249 | 006470 (4) | 778 | 013910 (3) | ref|XP_008807310.1| | 4e-55 | PREDICTED: uncharacterized protein At4g37920, chloroplastic [Phoenix dactylifer | |||
| JMSF012G03 | Sequence | 259 | 006470 (4) | 771 | 013910 (3) | ref|XP_008807310.1| | 4e-65 | PREDICTED: uncharacterized protein At4g37920, chloroplastic [Phoenix dactylifer | |||
| JMSF014I08 | Sequence | 248 | 006470 (4) | 766 | 013910 (3) | ref|XP_006354087.1| | 4e-76 | PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Solanum tuber | |||
| JMSF017C08 | Sequence | 473 | 006470 (4) | ref|XP_004237860.1| | 8e-35 | PREDICTED: uncharacterized protein At4g37920, chloroplastic [Solanum lycopersic | 826 | 019286 | ref|XP_009602324.1| | 2e-76 | PREDICTED: uncharacterized protein At4g37920, chloroplastic-like [Nicotiana tom |
This contig is upended
. : . : . : . : . : . :
JMSF017C08+ GACATCGCTNGTAAAAGTGTGGTCTGATATTGCTCCAATTCCTGCTAAAACCT
____________________________________________________________
consensus GACATCGCTNGTAAAAGTGTGGTCTGATATTGCTCCAATTCCTGCTAAAACCT
. : . : . : . : . : . :
JMSF017C08+ ATTAACCTTCTCCAATCAGCAGGAGTAGGCTTGTCAACCATGAAGACCCCAATTAACTTG
____________________________________________________________
consensus ATTAACCTTCTCCAATCAGCAGGAGTAGGCTTGTCAACCATGAAGACCCCAATTAACTTG
. : . : . : . : . : . :
JMSF017C08+ TCACAAACTCGGACCATCTTATTCTCATCCACACTTTCAACAGTATCATTTTTGTCATCT
____________________________________________________________
consensus TCACAAACTCGGACCATCTTATTCTCATCCACACTTTCAACAGTATCATTTTTGTCATCT
. : . : . : . : . : . :
JMSF012G03+ TAGGATTAGATTCTTCAGAACATAGCATG
JMSF012B20+ TTCAGAACATAGCATG
JMSF014I08+ TTCAGAACATAGCATG
JMSF017C08+ TCCTCTTTCACATCAGCTTTGTGGTCAGTTCTAGGATTAGATTCTTCAGAACATAGCATG
____________________________________________________________
consensus TCCTCTTTCACATCAGCTTTGTGGTCAGTTCTAGGATTAGATTCTTCAGAACATAGCATG
. : . : . : . : . : . :
JMSF012G03+ TGCTCTTTATCAGAATCACCTGGTATTGCAGAAGTATCAGCAACAAGAGCTTGAAGATGG
JMSF012B20+ TGCTCTTTATCAGAATCACCTGGTATTGCAGAAGTATCAGCAACAAGAGCTTGAAGATGG
JMSF014I08+ TGCTCTTTATCAGAATCACCTGGTATTGCAGAAGTATCAGCAACAAGAGCTTGAAGATGG
JMSF017C08+ TGCTCTTTATCAGAATCACCTGGTATTGCAGAAGTATCAGCAACAAGAGCTTGAAGATGG
____________________________________________________________
consensus TGCTCTTTATCAGAATCACCTGGTATTGCAGAAGTATCAGCAACAAGAGCTTGAAGATGG
. : . : . : . : . : . :
JMSF012G03+ GATGGTTGCAATCTCATTCTTGTCATTGACAAGAAAGAACCTGGGGATTGAGAGGTGAGA
JMSF012B20+ GATGGTTGCAATCTCATTCTTGTCATTGACAAGAAAGAACCTGGGGATTGAGAGGTGAGA
JMSF014I08+ GATGGTTGCAATCTCATTCTTGTCATTGACAAGAAAGAACCTGGGGATTGAGAGGTGAGA
JMSF017C08+ GATGGTTGCAATCTCATTCTTGTCATTGACAAGAAAGAACCTGGGGATTGAGAGGTGAGA
____________________________________________________________
consensus GATGGTTGCAATCTCATTCTTGTCATTGACAAGAAAGAACCTGGGGATTGAGAGGTGAGA
. : . : . : . : . : . :
JMSF012G03+ TAAGACGAACGCCACCGAAGCGGTGCACATGCTACGATGGAGAGCGGGGGAGCGAAGCTT
JMSF012B20+ TAAGACGAACGCCACCGAAGCGGTGCACATGCTACGATGGAGAGCGGGGGAGCGAAGCTT
JMSF014I08+ TAAGACGAACGCCACCGAAGCGGTGCACATGCTACGATGGAGAGCGGGGGAGCGAAGCTT
JMSF017C08+ TAAGACGAACGCCACCGAAGCGGTGCACATGCTACGATGGAGAGCGGGGGAGCGAAGCTT
____________________________________________________________
consensus TAAGACGAACGCCACCGAAGCGGTGCACATGCTACGATGGAGAGCGGGGGAGCGAAGCTT
. : . : . : . : . : . :
JMSF012G03+ CGAGAAGCAAAGCACGCAAGGGACCAGGTTAACTCCATTTCCACAGCC
JMSF012B20+ CGAGAAGCAAAGCACGCAAGGGACCAGGTTAACTCCATTTCCACAGCC
JMSF014I08+ CGAGAAGCAAAGCACGCAAGGGACCAGGTTAACTCCATTTCCACAGCC
JMSF017C08+ CGAGAAGCAAAGCACGCAAGGGACCAGGTTAACTCCATTTCCACAGCCAACGAATCCTCA
____________________________________________________________
consensus CGAGAAGCAAAGCACGCAAGGGACCAGGTTAACTCCATTTCCACAGCCAACGAATCCTCA