Contig 006467:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016J19Sequence399006467 (4)gb|EYU17965.1|2e-05hypothetical protein MIMGU_mgv1a0245891mg, partial [Erythranthe guttata]365006467 (4)gb|EYU17965.1|3e-06hypothetical protein MIMGU_mgv1a0245891mg, partial [Erythranthe guttata]
JMSF019N23Sequence256009237 (3)743006467 (4)ref|XP_006352713.1|197PREDICTED: uncharacterized protein LOC102605986 [Solanum tuberosum]
JMSF040C07Sequence703009237 (3)909006467 (4)ref|XP_009769918.1|261PREDICTED: uncharacterized protein LOC104220702 [Nicotiana sylvestris] ref|XP_00

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF040C07+ TGAGGAACAATNTTNTACAAAAGGATGATGTGGATTGTTTCAGATATGCACAAATCTA
                      ____________________________________________________________
consensus TGAGGAACAATNTTNTACAAAAGGATGATGTGGATTGTTTCAGATATGCACAAATCTA
 
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rJMSF040C07+ CATGCCTAATTNGGAGAGTCTTGATTTAAGTGACAATCCCATTGAGGATGATGGAGTCAG
                      ____________________________________________________________
consensus CATGCCTAATTNGGAGAGTCTTGATTTAAGTGACAATCCCATTGAGGATGATGGAGTCAG
 
. : . : . : . : . : . :
rJMSF040C07+ GAGTTTGATTACTTATCTTGAGTATTCATGTAAGATTGTTGAGTTGAGATTGGAAAACTG
rJMSF019N23+ GGAAAACTG
                      ____________________________________________________________
consensus GAGTTTGATTACTTATCTTGAGTATTCATGTAAGATTGTTGAGTTGAGATTGGAAAACTG
 
. : . : . : . : . : . :
rJMSF040C07+ TGAGCTTACCGGCCATGGGGTGAAGTGTCTTTTAGAATGTCTCTCTGTTTTGGAGAAACC
rJMSF019N23+ TGAGCTTACCGGCCATGGGGTGAAGTGTCTTTTAGAATGTCTCTCTGTTTTGGAGAAACC
                      ____________________________________________________________
consensus TGAGCTTACCGGCCATGGGGTGAAGTGTCTTTTAGAATGTCTCTCTGTTTTGGAGAAACC
 
. : . : . : . : . : . :
rJMSF040C07+ ACCAACCTCTCTTTCAATTGGTAGCAATTATCTTGGCAGTGAGATAGGAGCATCAATAGG
rJMSF019N23+ ACCAACCTCTCTTTCAATTGGTAGCAATTATCTTGGCAGTGAGATAGGAGCATCAATAGG
                      ____________________________________________________________
consensus ACCAACCTCTCTTTCAATTGGTAGCAATTATCTTGGCAGTGAGATAGGAGCATCAATAGG
 
. : . : . : . : . : . :
rJMSF040C07+ GAAATTTATGAGCAAAGGAATTCTATCTCTTGACATTGATGACATTGGGCTTGGTTCTTC
rJMSF019N23+ GAAATTTATGAGCAAAGGAATTCTATCTCTTGACATTGATGACATTGGGCTTGGTTCTTC
                      ____________________________________________________________
consensus GAAATTTATGAGCAAAGGAATTCTATCTCTTGACATTGATGACATTGGGCTTGGTTCTTC
 
. : . : . : . : . : . :
rJMSF040C07+ TGGCTTCTCAAAAGCTCAAGAAGAGATAGTGGAAGACTTGAAGATTATCTGCATCAACAT
rJMSF019N23+ TGGCTTCTCAAAAGCTCAAGAAGAGATAGTGGAAGACTTGAAGATTATCTGCATCAACAT
                      ____________________________________________________________
consensus TGGCTTCTCAAAAGCTCAAGAAGAGATAGTGGAAGACTTGAAGATTATCTGCATCAACAT
 
. : . : . : . : . : . :
rJMSF040C07+ AAGCAAGAATCGTGGTGGCATTGATACTGCAAAGTTTATATCAAAGCTTTTTTCATATGC
rJMSF019N23+ AAGCAAGAATCGTGGTGGCATTGATACTGCAAAGTTTATATCAAAGCTTTTTTCATATGC
                      ____________________________________________________________
consensus AAGCAAGAATCGTGGTGGCATTGATACTGCAAAGTTTATATCAAAGCTTTTTTCATATGC
 
. : . : . : . : . : . :
rJMSF040C07+ TCCGGAGCTTGTAGCCATTAATGCTGAGTTTAACCTTATGCCAGCTGAATCCTTGGCAAT
rJMSF019N23+ TCCGGAGCTTGTAGCCATTAATGCTGAGTTTAACCTTATGCCAGCTGAATCCTTGGCAAT
                      ____________________________________________________________
consensus TCCGGAGCTTGTAGCCATTAATGCTGAGTTTAACCTTATGCCAGCTGAATCCTTGGCAAT
 
. : . : . : . : . : . :
rJMSF016J19+ GTCTGGCCTAGCTGCAAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
rJMSF040C07+ CATAGGGTCTGGCCTAGCTGCAAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
rJMSF019N23+ CATAGGGTCTGGCCTAGCTGCAAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
JMSF016J19- AAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
                      ____________________________________________________________
consensus CATAGGGTCTGGCCTAGCTGCAAATGGGAAACTAGAGCTCTTGGACTTGAGTGGAAACGC
 
. : . : . : . : . : . :
rJMSF016J19+ ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
rJMSF040C07+ ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
rJMSF019N23+ ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
JMSF016J19- ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
                      ____________________________________________________________
consensus ATCATGTGAAAACTCTGCTGATGCTTCTGTGCTGAGTAAATATGAAATCAATGGGAAATT
 
. : . : . : . : . : . :
rJMSF016J19+ AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
rJMSF040C07+ AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
rJMSF019N23+ AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
JMSF016J19- AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
                      ____________________________________________________________
consensus AGTTATTATTGACTTGCCATCTTCAGCACCAAATGTACCTTACGACGATGATCCATAGTT
 
. : . : . : . : . : . :
rJMSF016J19+ GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
rJMSF040C07+ GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
rJMSF019N23+ GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
JMSF016J19- GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
                      ____________________________________________________________
consensus GCTTAGATCTTGGGTTTGTGCTAAAATTCAAGGTTGGTGGACAGATCATAAGGGAATACA
 
. : . : . : . : . : . :
rJMSF016J19+ AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
rJMSF040C07+ AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
rJMSF019N23+ AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
JMSF016J19- AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
                      ____________________________________________________________
consensus AAAACTCTTGCAACAACAAACGTTTTCCTCAAAAACACATCTTTAATTGTGTTCACCGCA
 
. : . : . : . : . : . :
rJMSF016J19+ CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
rJMSF040C07+ CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
rJMSF019N23+ CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
JMSF016J19- CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
                      ____________________________________________________________
consensus CTGCTTCAATTACCTTTTGTATGCTCTTAGTTCACTTTATAAATTGACTCTGTCCAAAAA
 
. : . : . : . : . : . :
rJMSF019N23+ C
JMSF016J19- CAGGCCTTGTTTTCTGAATTTTCAAATGAGCATATATAGTCCTATATTTCCAGCTAANNA
                      ____________________________________________________________
consensus CAGGCCTTGTTTTCTGAATTTTCAAATGAGCATATATAGTCCTATATTTCCAGCTAANNA