Contig 006445:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013M18Sequence472006445 (2)ref|XP_009780558.1|2e-36PREDICTED: uncharacterized protein LOC104229598 isoform X2 [Nicotiana sylvestri726011282 (2)gb|KDO80850.1|3e-74hypothetical protein CISIN_1g011723mg [Citrus sinensis]
JMSF052N06Sequence659006445 (2)ref|XP_009616109.1|2e-82PREDICTED: uncharacterized protein LOC104108712 isoform X3 [Nicotiana tomentosi933011282 (2)gb|KCW58228.1|9e-136hypothetical protein EUGRSUZ_H00930 [Eucalyptus grandis]

Alignment

This contig is upended


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JMSF052N06+ TTCAGAATCTACAGTAACCCG
                      ____________________________________________________________
consensus TTCAGAATCTACAGTAACCCG
 
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JMSF052N06+ GCGTTGAGGAAACAGCTTGCATATCTGCTTAATAACAACAGACTGTTTATGAAGGAGTTC
                      ____________________________________________________________
consensus GCGTTGAGGAAACAGCTTGCATATCTGCTTAATAACAACAGACTGTTTATGAAGGAGTTC
 
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JMSF052N06+ AGAGGTGATGGCCATATGACCAAGATTTTGAGTGCAGATAAGATTAGGAAAGAACTTCTC
                      ____________________________________________________________
consensus AGAGGTGATGGCCATATGACCAAGATTTTGAGTGCAGATAAGATTAGGAAAGAACTTCTC
 
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JMSF052N06+ AAGTTGTTCTGCACGATTCTTTTCCAGCACGCTCATGGCTGATTCAACCAAATTGTACTT
                      ____________________________________________________________
consensus AAGTTGTTCTGCACGATTCTTTTCCAGCACGCTCATGGCTGATTCAACCAAATTGTACTT
 
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JMSF052N06+ CTCTTTTAGATCATTAGACAACTTGTCAATATTAGTCTTCCCTTCCAAAAGTTGTTCTCT
JMSF013M18+ GATCATTAGACAACTNGTCAATATTAGTCTTCCCTTCCAAAAGTTGTTCTCT
                      ____________________________________________________________
consensus CTCTTTTAGATCATTAGACAACTTGTCAATATTAGTCTTCCCTTCCAAAAGTTGTTCTCT
 
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JMSF052N06+ ACGTTGTCTGAGATCCTCCCTTAATCTTGCAAGCTTCTCATTTTGGAGCACCCGCCAACT
JMSF013M18+ ACGTTGTCTGAGATCCTCCCTTAATCTTGCAAGCTTCTCATTTTGGAGCACCCGCCAACT
                      ____________________________________________________________
consensus ACGTTGTCTGAGATCCTCCCTTAATCTTGCAAGCTTCTCATTTTGGAGCACCCGCCAACT
 
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JMSF052N06+ CAGTTGATCATCAGCCTTGCCCTTAGCAACAAGCACTTCACTCAATCTTGCATATAATGC
JMSF013M18+ CAGTTGATCATCAGCCTTGCCCTTAGCAACAAGCACTTCACTCAATCTTGCATATAATGC
                      ____________________________________________________________
consensus CAGTTGATCATCAGCCTTGCCCTTAGCAACAAGCACTTCACTCAATCTTGCATATAATGC
 
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JMSF052N06+ ATCCCTCCGACTCTTCAACGATTTCAAAGTCGTACCATACTCGTTCAATCTGTAATTAAC
JMSF013M18+ ATCCCTCCGACTCTTCAACGATTTCAAAGTCGTACCATACTCGTTCAATCTGTAATTAAC
                      ____________________________________________________________
consensus ATCCCTCCGACTCTTCAACGATTTCAAAGTCGTACCATACTCGTTCAATCTGTAATTAAC
 
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JMSF052N06+ ACAGACAGGGCAAATAGAAGGGAGATTTGGGTTCTCACATATTCCACAGACATTTGCTTT
JMSF013M18+ ACAGACAGGGCAAATAGAAGGGAGATTTGGGTTCTCACATATTCCACAGACATTTGCTTT
                      ____________________________________________________________
consensus ACAGACAGGGCAAATAGAAGGGAGATTTGGGTTCTCACATATTCCACAGACATTTGCTTT
 
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JMSF052N06+ CCTCGTCATCATCTGAACATTCATTCACTCACACCTATGGTTTTCTTCCTCATCCGTGTG
JMSF013M18+ CCTCGTCATCATCTGAACATTCATTCACTCACACCTATGGTTTTCTTCCTCATCCGTGTG
                      ____________________________________________________________
consensus CCTCGTCATCATCTGAACATTCATTCACTCACACCTATGGTTTTCTTCCTCATCCGTGTG
 
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JMSF052N06+ AATGTAATTGGGAATCTATGGTCGCTTTTAAGGCGGCGAGTTTGTAGTGCCTCCCGGTGA
JMSF013M18+ AATGTAATTGGGAATCTATGGTCGCTTTTAAGGCGGCGAGTTTGTAGTGCCTCCCGGTGA
                      ____________________________________________________________
consensus AATGTAATTGGGAATCTATGGTCGCTTTTAAGGCGGCGAGTTTGTAGTGCCTCCCGGTGA
 
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JMSF052N06+ CCGGAGCTCCGGCGGCGCTATGTCTTAGAGTTTCCTTG
JMSF013M18+ CCGGAGCTCCGGCGGCGCTATGTCTTAGAGTTTCCTTGGCTTTGCTTTTGCAGTCTTGTC
                      ____________________________________________________________
consensus CCGGAGCTCCGGCGGCGCTATGTCTTAGAGTTTCCTTGGCTTTGCTTTTGCAGTCTTGTC