Contig 006444:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF006G14Sequence408006444 (2)506005643 (2)ref|XP_009629751.1|195PREDICTED: uncharacterized protein LOC104119857 [Nicotiana tomentosiformis]
JMSF013K24Sequence344006444 (2)728005643 (2)ref|XP_009629751.1|235PREDICTED: uncharacterized protein LOC104119857 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF006G14+ CCCCGAAAAAAA
                      ____________________________________________________________
consensus CCCCGAAAAAAA
 
. : . : . : . : . : . :
JMSF006G14+ AAATACTAACAAATCTTACCTACCATTGAAGCAAACATAGGAAGAAAACCAAGTAACCAA
                      ____________________________________________________________
consensus AAATACTAACAAATCTTACCTACCATTGAAGCAAACATAGGAAGAAAACCAAGTAACCAA
 
. : . : . : . : . : . :
JMSF006G14+ ACAGAAAAGTATAATCACCCAAAGCAATTCCCTAAAAATGCCTCAAAATCCCTAGAAATT
                      ____________________________________________________________
consensus ACAGAAAAGTATAATCACCCAAAGCAATTCCCTAAAAATGCCTCAAAATCCCTAGAAATT
 
. : . : . : . : . : . :
JMSF006G14+ TACACAGTAGCAGTTACAAAATCGAAACTTCCAAACCTAGCCAGACACCCACCCACCGAA
                      ____________________________________________________________
consensus TACACAGTAGCAGTTACAAAATCGAAACTTCCAAACCTAGCCAGACACCCACCCACCGAA
 
. : . : . : . : . : . :
JMSF006G14+ TTAAAGAAAACCATAGAATTCCCTAACAAATTCCACCTCAAGACCACAAAATCAAGAATG
                      ____________________________________________________________
consensus TTAAAGAAAACCATAGAATTCCCTAACAAATTCCACCTCAAGACCACAAAATCAAGAATG
 
. : . : . : . : . : . :
JMSF006G14+ GCAAAAAGGAAAGTGAAGAGGCCCCAGGCCATACCTCGGATGGAAGAATGGAGATTCGAG
JMSF013K24+ CTCGGATGGAAGAATGGAGATTCGAG
                      ____________________________________________________________
consensus GCAAAAAGGAAAGTGAAGAGGCCCCAGGCCATACCTCGGATGGAAGAATGGAGATTCGAG
 
. : . : . : . : . : . :
JMSF006G14+ GGAGGGCAAAGCAAGAAGAGGTGGCCATGGCAGCAGTTAAGGATGACAATTACCCAAGAA
JMSF013K24+ GGAGGGCAAAGCAAGAAGAGGTGGCCATGGCAGCAGTTAAGGATGACAATTACCCAAGAA
                      ____________________________________________________________
consensus GGAGGGCAAAGCAAGAAGAGGTGGCCATGGCAGCAGTTAAGGATGACAATTACCCAAGAA
 
. : . : . : . : . : . :
JMSF006G14+ TTCAACCAGCAACAACAGAAGAGACGCCTGTTTCT
JMSF013K24+ TTCAACCAGCAACAACAGAAGAGACGCCTGTTTCTGCTTCATTCGTTGGTGCTGCTTTAG
                      ____________________________________________________________
consensus TTCAACCAGCAACAACAGAAGAGACGCCTGTTTCTGCTTCATTCGTTGGTGCTGCTTTAG
 
. : . : . : . : . : . :
JMSF013K24+ TGCGGATTATGAAAGCGCATATAGAAGAAGACAGCGAGCGTTGTTGAATTGAGAAAGGCC
                      ____________________________________________________________
consensus TGCGGATTATGAAAGCGCATATAGAAGAAGACAGCGAGCGTTGTTGAATTGAGAAAGGCC