Contig 006440:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF013E19Sequence211006440 (3)703012749 (5)ref|XP_009779742.1|161PREDICTED: uncharacterized protein LOC104228893 [Nicotiana sylvestris]
JMSF016C03Sequence293006440 (3)774012749 (5)ref|XP_009779742.1|157PREDICTED: uncharacterized protein LOC104228893 [Nicotiana sylvestris]
JMSF046G02Sequence694006440 (3)ref|XP_011098926.1|68.6PREDICTED: uncharacterized protein LOC105177458 [Sesamum indicum]809012749 (5)ref|XP_009624110.1|152PREDICTED: uncharacterized protein LOC104115230 [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046G02+ GGGGCACCTAATAATAATAATAATAACTAAGAGC
                      ____________________________________________________________
consensus GGGGCACCTAATAATAATAATAATAACTAAGAGC
 
. : . : . : . : . : . :
JMSF046G02+ ATGCCAACATTATTTGCACTTTATATATATGCAACTCGATCTCTTTCTTTCTTTACTTTT
                      ____________________________________________________________
consensus ATGCCAACATTATTTGCACTTTATATATATGCAACTCGATCTCTTTCTTTCTTTACTTTT
 
. : . : . : . : . : . :
JMSF046G02+ GCTTTCCCTTTTCCAGCTACTTAATTATAGTTAATAGTTCCCTCAAATAATTAATTATTA
                      ____________________________________________________________
consensus GCTTTCCCTTTTCCAGCTACTTAATTATAGTTAATAGTTCCCTCAAATAATTAATTATTA
 
. : . : . : . : . : . :
JMSF046G02+ TTATATTATAACTTCACTTCATTTGAATGTTCATCTTCCATTTTGGGAATAGGCAACACT
                      ____________________________________________________________
consensus TTATATTATAACTTCACTTCATTTGAATGTTCATCTTCCATTTTGGGAATAGGCAACACT
 
. : . : . : . : . : . :
JMSF046G02+ TAGTCTAGTCAAAGGGAAAATGTTTCGTGAAAACAAATTTAGTCAAGCCCAACATTGTAA
                      ____________________________________________________________
consensus TAGTCTAGTCAAAGGGAAAATGTTTCGTGAAAACAAATTTAGTCAAGCCCAACATTGTAA
 
. : . : . : . : . : . :
JMSF046G02+ ATTGTAATTAATTCCCACCACAATCTAATCTAGTATTACTGCGCGCAATTTAATTTAATT
                      ____________________________________________________________
consensus ATTGTAATTAATTCCCACCACAATCTAATCTAGTATTACTGCGCGCAATTTAATTTAATT
 
. : . : . : . : . : . :
JMSF046G02+ TAATCTAGATTTACTCAACTAACTATTCGTACTATACCATTTATGGCAAAGTGATTTTGG
                      ____________________________________________________________
consensus TAATCTAGATTTACTCAACTAACTATTCGTACTATACCATTTATGGCAAAGTGATTTTGG
 
. : . : . : . : . : . :
JMSF046G02+ ATGATTTTTCTGACCCTGAGAGCTTCCTCCAGAGACCCTCCGCGAAAGACCTCGCCCATC
JMSF016C03+ TCCAGAGACCNTCCGCGAAAGACCTCGCCCATC
                      ____________________________________________________________
consensus ATGATTTTTCTGACCCTGAGAGCTTCCTCCAGAGACCCTCCGCGAAAGACCTCGCCCATC
 
. : . : . : . : . : . :
JMSF046G02+ TCTTCAACTGTTGCGCATGTTTTGTTTCCTCCAACATCGGACCTGGTACTAGTATCAGCT
JMSF016C03+ TCTTCAACTGTTGCGCATGTTTTGTTTCCTCCAACATCGGACCTGGTACTAGTATCAGCT
                      ____________________________________________________________
consensus TCTTCAACTGTTGCGCATGTTTTGTTTCCTCCAACATCGGACCTGGTACTAGTATCAGCT
 
. : . : . : . : . : . :
JMSF046G02+ ACCTTGGCTACAACGGCTGCTTTGAGTGGGAGGTCGTCGGATCTTGATGAGGTGAGAAGT
JMSF016C03+ ACCTTGGCTACAACGGCTGCTTTGAGTGGGAGGTCGTCGGATCTTGATGAGGTGAGAAGT
JMSF013E19+ GAGGTCGTCGGATCTTGATGAGGTGAGAAGT
                      ____________________________________________________________
consensus ACCTTGGCTACAACGGCTGCTTTGAGTGGGAGGTCGTCGGATCTTGATGAGGTGAGAAGT
 
. : . : . : . : . : . :
JMSF046G02+ AATAAGCCAACGAGTGTGGAGAACGCACTGCTCAGCAGCAAGCAGCGCAGGGCAAGGCGC
JMSF016C03+ AATAAGCCAACGAGTGTGGAGAACGCACTGCTCAGCAGCAAGCAGCGCAGGGCAAGGCGC
JMSF013E19+ AATAAGCCAACGAGTGTGGAGAACGCACTGCTCAGCAGCAAGCAGCGCAGGGCAAGGCGC
                      ____________________________________________________________
consensus AATAAGCCAACGAGTGTGGAGAACGCACTGCTCAGCAGCAAGCAGCGCAGGGCAAGGCGC
 
. : . : . : . : . : . :
JMSF046G02+ CTCCGTCGCCATCTAACTCCGACCACCACCCTCATATCTATATGTTAGCTACTAAGGGCC
JMSF016C03+ CTCCGTCGCCATCTAACTCCGACCACCACCCTCATATCTATATGTTAGCTACTAAGGGCC
JMSF013E19+ CTCCGTCGCCATCTAACTCCGACCACCACCCTCATATCTATATGTTAGCTACTAAGGGCC
                      ____________________________________________________________
consensus CTCCGTCGCCATCTAACTCCGACCACCACCCTCATATCTATATGTTAGCTACTAAGGGCC
 
. : . : . : . : . : . :
JMSF016C03+ AATCACTTGAGCTGATACC
JMSF013E19+ AATCACTTGAGCTGATACCGAGGAAACAACGCTGTTTAGGTCGTGATTTGTTAAACCGTC
                      ____________________________________________________________
consensus AATCACTTGAGCTGATACCGAGGAAACAACGCTGTTTAGGTCGTGATTTGTTAAACCGTC