Contig 006427:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF011E03Sequence386006427 (2)ref|XP_009604993.1|1e-31PREDICTED: activator of 90 kDa heat shock protein ATPase homolog [Nicotiana tom769004399 (2)ref|XP_007029027.1|2e-84Aha1 domain-containing protein isoform 1 [Theobroma cacao] ref|XP_007029028.1| A
JMSF047N09Sequence685006427 (2)ref|XP_009604993.1|4e-96PREDICTED: activator of 90 kDa heat shock protein ATPase homolog [Nicotiana tom765004399 (2)ref|XP_010111375.1|9e-85Activator of 90 kDa heat shock protein ATPase-1-like protein [Morus notabilis]

Alignment

This contig is upended


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JMSF047N09+                                       TGGCGGGCCCGCCCCTGGCCATTGCGGTTACC
                      ____________________________________________________________
consensus                                         TGGCGGGCCCGCCCCTGGCCATTGCGGTTACC
 
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JMSF047N09+           CAACTTCTTACTTGCTCCAAAACGAAGGGCTTTCCTTTAGCAATAAAAGCGTCCTTCAAT
                      ____________________________________________________________
consensus             CAACTTCTTACTTGCTCCAAAACGAAGGGCTTTCCTTTAGCAATAAAAGCGTCCTTCAAT
 
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JMSF047N09+           CTCTTCTCGATCGGCCCATCTTCGCGAATTGTAACCCTAATTTCCGGGTCTTCATCGGCG
                      ____________________________________________________________
consensus             CTCTTCTCGATCGGCCCATCTTCGCGAATTGTAACCCTAATTTCCGGGTCTTCATCGGCG
 
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JMSF047N09+           TTCTCGTCCGAAATATACGGGATTTCGACCGTACCTTCCGTCTTAGCCAACGATTTCCCG
                      ____________________________________________________________
consensus             TTCTCGTCCGAAATATACGGGATTTCGACCGTACCTTCCGTCTTAGCCAACGATTTCCCG
 
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JMSF047N09+           TCAGAATCCTTGGCCTCGCCCTCCCAAGACAGAACAACGTTTAGCTCGTACCCGGGGATG
                      ____________________________________________________________
consensus             TCAGAATCCTTGGCCTCGCCCTCCCAAGACAGAACAACGTTTAGCTCGTACCCGGGGATG
 
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JMSF047N09+           ATTTTCCCCTTGCGGACATTAACGTAGGCCTCGCCGTCGAACTTATCGAGCTTTTTGGTG
JMSF011E03+                                             CGTCGAACTTATCGAGCTTTTTGGTG
                      ____________________________________________________________
consensus             ATTTTCCCCTTGCGGACATTAACGTAGGCCTCGCCGTCGAACTTATCGAGCTTTTTGGTG
 
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JMSF047N09+           CGGATGAAGAGATTTCCCTCGCCGCCGAGGATGGTTTGATCAGCTAAAAGCTTGTTGAAG
JMSF011E03+           CGGATGAAGAGATTTCCCTCGCCGCCGAGGATGGTTTGATCAGCTAAAAGCTTGTTGAAG
                      ____________________________________________________________
consensus             CGGATGAAGAGATTTCCCTCGCCGCCGAGGATGGTTTGATCAGCTAAAAGCTTGTTGAAG
 
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JMSF047N09+           AAGCTGCGGGACCATTCAAGGCAGTTGGTCTCGGCCCAGTGCCAGTTGTGGACGTTGGTG
JMSF011E03+           AAGCTGCGGGACCATTCAAGGCAGTTGGTCTCGGCCCAGTGCCAGTTGTGGACGTTGGTG
                      ____________________________________________________________
consensus             AAGCTGCGGGACCATTCAAGGCAGTTGGTCTCGGCCCAGTGCCAGTTGTGGACGTTGGTG
 
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JMSF047N09+           CCGTCCGGGCGGTCCTCAACGATCCACCGCTTGTCTCCTTCTCCGATCTTAGCCATACAA
JMSF011E03+           CCGTCCGGGCGGTCCTCAACGATCCACCGCTTGTCTCCTTCTCCGATCTTAGCCATACAA
                      ____________________________________________________________
consensus             CCGTCCGGGCGGTCCTCAACGATCCACCGCTTGTCTCCTTCTCCGATCTTAGCCATACAA
 
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JMSF047N09+           TACTCCGGCGACGGCGGCGGGCGATTGCGAAGAAAAATAGAGTCCCAAAGAGCTTAGATT
JMSF011E03+           TACTCCGGCGACGGCGGCGGGCGATTGCGAAGAAAAATAGAGTCCCAAAGAGCTTAGATT
                      ____________________________________________________________
consensus             TACTCCGGCGACGGCGGCGGGCGATTGCGAAGAAAAATAGAGTCCCAAAGAGCTTAGATT
 
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JMSF047N09+           CGGCGAATTGAGTTAGAAAAAGTAGTTGAGATGTAGAGATAAAATTGAAGGGTTTTGGAG
JMSF011E03+           CGGCGAATTGAGTTAGAAAAAGTAGTTGAGATGTAGAGATAAAATTGAAGGGTTTTGGAG
                      ____________________________________________________________
consensus             CGGCGAATTGAGTTAGAAAAAGTAGTTGAGATGTAGAGATAAAATTGAAGGGTTTTGGAG
 
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JMSF047N09+           TCTGGAGGGTTCTGAAAGAAGTGTCCAGAATTTTCAGGTCGGATAGGCCC          
JMSF011E03+           TCTGGAGGGTTCTGAAAGAAGTGTCCAGAATTTTCAAGTCGGATAGGCCCAACAAACTTC
                      ____________________________________________________________
consensus             TCTGGAGGGTTCTGAAAGAAGTGTCCAGAATTTTCAGGTCGGATAGGCCCAACAAACTTC