Contig 006413:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF009H23Sequence272006413 (3)ref|XP_009786415.1|2e-06PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana sylvestris] ref|XP_00978774002876 (2)ref|XP_009786415.1|1e-54PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana sylvestris] ref|XP_00978
JMSF015E16Sequence492006413 (3)ref|XP_009589078.1|1e-58PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana tomentosiformis]
JMSF027E12Sequence635006413 (3)ref|XP_009786415.1|8e-91PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana sylvestris] ref|XP_00978788002876 (2)ref|XP_009786415.1|1e-50PREDICTED: E3 ubiquitin-protein ligase Hakai [Nicotiana sylvestris] ref|XP_00978

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF027E12+ TTTTTCTGCATTTGGATGGAGGAGGTCAGCATGGTTTCCATGAATATG
                      ____________________________________________________________
consensus TTTTTCTGCATTTGGATGGAGGAGGTCAGCATGGTTTCCATGAATATG
 
. : . : . : . : . : . :
JMSF027E12+ AGCCTCAAACTCATTCTTCTTTATGAACGACTTAAGACAGTGAGGAGCTGCACAGATGAA
                      ____________________________________________________________
consensus AGCCTCAAACTCATTCTTCTTTATGAACGACTTAAGACAGTGAGGAGCTGCACAGATGAA
 
. : . : . : . : . : . :
JMSF015E16+ GAATGCGTTCATCACAGAGGTAGCA
JMSF027E12+ AATCCCTTCCATCAATTTTATTGTCTGTATCTTCTGAATGCGTTCATCACAGAGGTAGCA
                      ____________________________________________________________
consensus AATCCCTTCCATCAATTTTATTGTCTGTATCTTCTGAATGCGTTCATCACAGAGGTAGCA
 
. : . : . : . : . : . :
JMSF015E16+ GAGAGAATCACTCCTTGCACAATCCAAACAGAATGCATGCTCACATGGGCTCAGACGCCC
JMSF027E12+ GAGAGAATCACTCCTTGCACAATCCAAACAGAATGCATGCTCACATGGGCTCAGACGCCC
                      ____________________________________________________________
consensus GAGAGAATCACTCCTTGCACAATCCAAACAGAATGCATGCTCACATGGGCTCAGACGCCC
 
. : . : . : . : . : . :
JMSF015E16+ ATAAATAGCAATAGGGAAATCGCAACGAACACAAAAATGCACTCGCTCCCCAAGCTGACG
JMSF027E12+ ATAAATAGCAATAGGGAAATCGCAACGAACACAAAAATGCACTCGCTCCCCAAGCTGACG
                      ____________________________________________________________
consensus ATAAATAGCAATAGGGAAATCGCAACGAACACAAAAATGCACTCGCTCCCCAAGCTGACG
 
. : . : . : . : . : . :
JMSF015E16+ ACGGGATTTGCGGCCAACAGCTTTTGAAATGGATGCAGTACTTGCCAAACCAAGGCTCTT
JMSF027E12+ ACGGGATTTGCGGCCAACAGCTTTTGAAATGGATGCAGTACTTGCCAAACCAAGGCTCTT
                      ____________________________________________________________
consensus ACGGGATTTGCGGCCAACAGCTTTTGAAATGGATGCAGTACTTGCCAAACCAAGGCTCTT
 
. : . : . : . : . : . :
JMSF015E16+ AGCTACAGGAAGATCAGCTAAGACAAGGTGATCAGGGCATGCAACAGTAATGCTATCTAC
JMSF027E12+ AGCTACAGGAAGATCAGCTAAGACAAGGTGATCAGGGCATGCAACAGTAATGCTATCTAC
JMSF009H23+ GGTGATCAGGGCATGCAACAGTAATGCTATCTAC
                      ____________________________________________________________
consensus AGCTACAGGAAGATCAGCTAAGACAAGGTGATCAGGGCATGCAACAGTAATGCTATCTAC
 
. : . : . : . : . : . :
JMSF015E16+ GGGTAAGGGCTTTGCAGGACCCCCACTTTCACTGGATGGCTTTCTGAGCTTAATCTGAAG
JMSF027E12+ GGGTAAGGGCTTTGCAGGACCCCCACTTTCACTGGATGGCTTTCTGAGCTTAATCTGAAG
JMSF009H23+ GGGTAAGGGCTTTGCAGGACCCCCACTTTCACTGGATGGCTTTCTGAGCTTAATCTGAAG
                      ____________________________________________________________
consensus GGGTAAGGGCTTTGCAGGACCCCCACTTTCACTGGATGGCTTTCTGAGCTTAATCTGAAG
 
. : . : . : . : . : . :
JMSF015E16+ CATCTCTTCCAATATTTCTTTCCTCCCTAAACAACCAATCTGAGTCCTTCAACTTAAATA
JMSF027E12+ CATCTCTTCCAATATTTCTTTCCTCCCTAAACAACCAATCTGAGTTCTTCAACTTAAATA
JMSF009H23+ CATCTCTTCCAATATTTCTTTCCTCCCTAAACAACCAATCTGAGTTCTTCAACTTAAATA
                      ____________________________________________________________
consensus CATCTCTTCCAATATTTCTTTCCTCCCTAAACAACCAATCTGAGTTCTTCAACTTAAATA
 
. : . : . : . : . : . :
JMSF015E16+ ATGTTTTTCAAAAAATTCTCAGCTAGCCGTCCGACCGTCGTCACTCCACCGCTGTTCTGC
JMSF027E12+ ATGTTTTTCAAAAAATTCTCAGCTAGCCGTCCGACCGTCGTCACTCCACCGCTGTTCTGC
JMSF009H23+ ATGTTTTTCAAAAAATTCTCAGCTAGCCGTCCGACCGTCGTCACTCCACCGCTGTTCTGC
                      ____________________________________________________________
consensus ATGTTTTTCAAAAAATTCTCAGCTAGCCGTCCGACCGTCGTCACTCCACCGCTGTTCTGC
 
. : . : . : . : . : . :
JMSF015E16+ AGTCCGCCATCTCCATAAAACTACAGCAACGTCGCAAGAAAACG
JMSF027E12+ AGTCCGCCATCTCCATAAAACTACAGCAACGTCGCAAGAAAACG
JMSF009H23+ AGTCCGCCAT--CCATAAAACTACAGCAACGTCGCAAGAAAACGTCAATTGTGAAAATTC
                      ____________________________________________________________
consensus AGTCCGCCATCTCCATAAAACTACAGCAACGTCGCAAGAAAACGTCAATTGTGAAAATTC