Contig 006409:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030G21Sequence519006409 (2)ref|XP_011081570.1|6e-62PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like isoform X1 [Sesamum indi636002614 (3)gb|ACF86701.1|3e-65unknown [Zea mays]
JMSF009A03Sequence278006409 (2)760002614 (3)gb|EPS66777.1|6e-105hypothetical protein M569_07999 [Genlisea aurea]

Alignment

This contig is upended


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JMFF030G21+ ACAAGGGCAGCAACTTGACCAGCAACAGGTTCAATCTGTTG
                      ____________________________________________________________
consensus ACAAGGGCAGCAACTTGACCAGCAACAGGTTCAATCTGTTG
 
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JMFF030G21+ CAAGGTTGAGAGGACAAAAACTGCAGTTTTGCCCATTCCAGATTTTGCTTGGCAAATTAC
                      ____________________________________________________________
consensus CAAGGTTGAGAGGACAAAAACTGCAGTTTTGCCCATTCCAGATTTTGCTTGGCAAATTAC
 
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JMFF030G21+ ATCCATACCCAGAATAGCTTGTGGAATACATTCATGTTGAACTTCGGAGGGATGCTCAAA
                      ____________________________________________________________
consensus ATCCATACCCAGAATAGCTTGTGGAATACATTCATGTTGAACTTCGGAGGGATGCTCAAA
 
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JMFF030G21+ CCCTGAATCCACAATAGCTCGCAGTAGCTCTGGCTTGAGAAGAAAGTCTCTGAAACCGGA
                      ____________________________________________________________
consensus CCCTGAATCCACAATAGCTCGCAGTAGCTCTGGCTTGAGAAGAAAGTCTCTGAAACCGGA
 
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JMFF030G21+ ACTATGAATTCCAACATAACCCTTCTTAACGGACTCGCCGTTGACTTTAGCTCCGACGGA
JMSF009A03+ CGGACTCGCCGTTGACTTTAGCTCCGACGGA
                      ____________________________________________________________
consensus ACTATGAATTCCAACATAACCCTTCTTAACGGACTCGCCGTTGACTTTAGCTCCGACGGA
 
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JMFF030G21+ ATCGGGGGCTTTTTCGTCCTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCATCATT
JMSF009A03+ ATCGGGGGCTTTTTCGTCCTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCATCATT
                      ____________________________________________________________
consensus ATCGGGGGCTTTTTCGTCCTCTTCCTCGTAGTCGAGAAGCTCCTCCTCGTAAGCATCATT
 
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JMFF030G21+ CTCCTTGTTTTCTCCCATTACTGCTTCTTCTTGTAGAATCTATATGAGAGAGTAGGATTT
JMSF009A03+ CTCCTTGTTTTCTCCCATTACTGCTTCTTCTTGTAGAATCTATATGAGATAGTAGGATTT
                      ____________________________________________________________
consensus CTCCTTGTTTTCTCCCATTACTGCTTCTTCTTGTAGAATCTATATGAGATAGTAGGATTT
 
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JMFF030G21+ TGGAAGGGATTCGTGTTAGTTAGGCGTTAGGGTTTGAGTTCTGCAGAGAAAACGTTAGGC
JMSF009A03+ TGGAAGGGATTCGTGTTAGTTAGGCGTTAGGGTTTGAGTTCTGCAGAGAAAACGTTAGGC
                      ____________________________________________________________
consensus TGGAAGGGATTCGTGTTAGTTAGGCGTTAGGGTTTGAGTTCTGCAGAGAAAACGTTAGGC
 
. : . : . : . : . : . :
JMFF030G21+ TAATCGAAAAGAAAAACGAAAATTTAGAGAGAGAGAGAGATGTGGGGGAGATAGCGA
JMSF009A03+ TAATCGAAAAGAAAAACGAAAATTTAGAGAGAGAGAGAGATGTGGGGGAGATAGCGACCC
                      ____________________________________________________________
consensus TAATCGAAAAGAAAAACGAAAATTTAGAGAGAGAGAGAGATGTGGGGGAGATAGCGACCC