Contig 006406:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF008O16Sequence219006406 (3)648011253 (3)ref|XP_002533134.1|1e-102acyl-CoA oxidase, putative [Ricinus communis] gb|EEF29246.1| acyl-CoA oxidase, p
JMSF018E24Sequence461006406 (3)ref|XP_006355366.1|3e-41PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Solanum tuberosum]634011253 (3)ref|XP_002533134.1|8e-103acyl-CoA oxidase, putative [Ricinus communis] gb|EEF29246.1| acyl-CoA oxidase, p
JMSF028O19Sequence662006406 (3)ref|XP_006355366.1|1e-64PREDICTED: acyl-coenzyme A oxidase 2, peroxisomal-like [Solanum tuberosum]723019342ref|XP_009589375.1|267PREDICTED: uncharacterized protein LOC104086490, partial [Nicotiana tomentosifo

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF028O19+ GAAGGCCTTGAACATNGGAACCATGATGAAGCTCAGTCATTGCAAAGCAACCGGTGTA
                      ____________________________________________________________
consensus GAAGGCCTTGAACATNGGAACCATGATGAAGCTCAGTCATTGCAAAGCAACCGGTGTA
 
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JMSF028O19+ TTCCAGGTTGTCTATGCCTTCAAAGTACTTGTCTCTGTGTTTCTTAGTTCCCAAATTGAG
                      ____________________________________________________________
consensus TTCCAGGTTGTCTATGCCTTCAAAGTACTTGTCTCTGTGTTTCTTAGTTCCCAAATTGAG
 
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JMSF028O19+ AACAGAGCCTCCCCAAAGACTGTACTGAACACCCAGCTTGATACCTAAAGAAATATCAAC
                      ____________________________________________________________
consensus AACAGAGCCTCCCCAAAGACTGTACTGAACACCCAGCTTGATACCTAAAGAAATATCAAC
 
. : . : . : . : . : . :
JMSF018E24+ CCGCAATAGCGAAATACTTAACAGGGTCGTCGACCACGTATCTGAA
JMSF028O19+ GCTACCTGCAGCCTCCGCAATAGCGAAATACTTAACAGGGTCGTCGACCACGTAT--GAA
                      ____________________________________________________________
consensus GCTACCTGCAGCCTCCGCAATAGCGAAATACTTAACAGGGTCGTCGACCACGTATCTGAA
 
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JMSF018E24+ GGGCCTTATCCCTGCCTCATGGACCAGACCCCTAAGCTGCCTCATGCACAATTCCCTGTG
JMSF028O19+ GGGCCTTATCCCTGCCTCATGGACCAGGCCCCTAAGCTGCCTCATGCACAATTCCCTGTG
                      ____________________________________________________________
consensus GGGCCTTATCCCTGCCTCATGGACCAGGCCCCTAAGCTGCCTCATGCACAATTCCCTGTG
 
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JMSF018E24+ CTCATCCTTGGAGATCTCGATAGGCGTCTGCAAATCCGGCCTGGATTTGAAGAACTCGTA
JMSF028O19+ CTCATCCTTGGAGATCTCGATAGGCGTCTGCAAATCCGGCCTGGATTTGAAGAACTCGTA
                      ____________________________________________________________
consensus CTCATCCTTGGAGATCTCGATAGGCGTCTGCAAATCCGGCCTGGATTTGAAGAACTCGTA
 
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JMSF018E24+ CACCTTATCTTGGATGTCTCGGTGCCTCCCTTTCATGTACTGCAACAACATATCCGTCCT
JMSF028O19+ CACCTTATCTTGGATGTCTCGGTGCCTCCCTTTCATGTACTGCAACAACATATCCGTCCT
                      ____________________________________________________________
consensus CACCTTATCTTGGATGTCTCGGTGCCTCCCTTTCATGTACTGCAACAACATATCCGTCCT
 
. : . : . : . : . : . :
JMSF018E24+ CACCTTCAACACCTTCGCCTTCCCCTTCCCCTTCCCCGCGCACATTAACATCTCCAGGCC
JMSF028O19+ CACCTTCAACACCTTCGCCTTCCCCTTCCCCTTCCCCGCGCACATTAACATCTCCAGGCC
                      ____________________________________________________________
consensus CACCTTCAACACCTTCGCCTTCCCCTTCCCCTTCCCCGCGCACATTAACATCTCCAGGCC
 
. : . : . : . : . : . :
JMSF018E24+ GCGATCCGGAAAGTCCGGGAAAAGCGCCGGGTTGAGGTGCAATGACAGCCGCCGCATGCG
JMSF028O19+ GCGATCCGGAAAGTCCGGGAAAAGCGCCGGGTTGAGGTGCAATGACAGCCGCCGCATGCG
JMSF008O16+ AAGCGCCGGGTTGAGGTGCAATGACAGCCGCCGCATGCG
                      ____________________________________________________________
consensus GCGATCCGGAAAGTCCGGGAAAAGCGCCGGGTTGAGGTGCAATGACAGCCGCCGCATGCG
 
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JMSF018E24+ GCGGTGGATGAGCTGCATGTCGTCGCGATTTTCATCTTCCACCGCCGTGTCATCGGAACT
JMSF028O19+ GCGGTGGATGAGCTGCATGTCGTCGCGATTTTCATCTTCCACCGCCGTGTCATCGGAACT
JMSF008O16+ GCGGTGGATGAGCTGCATGTCGTCGCGATTTTCATCTTCCACCGCCGTGTCATCGGAACT
                      ____________________________________________________________
consensus GCGGTGGATGAGCTGCATGTCGTCGCGATTTTCATCTTCCACCGCCGTGTCATCGGAACT
 
. : . : . : . : . : . :
JMSF018E24+ TCGTGACGTCACCTCCGGGAGGTCCATTGCCTTGCTCTAATTGTCAAATCAAAT
JMSF028O19+ TCGTGACGTCACCTCCGGGAGGTCCATTGCCTTGCTCTAATTGTCAAATCAAATGTATTG
JMSF008O16+ TCGTGACGTCACCTCCGGGAGGTCCATTGCCTTGCTCTAATTGTCAAATCAAATGTATTG
                      ____________________________________________________________
consensus TCGTGACGTCACCTCCGGGAGGTCCATTGCCTTGCTCTAATTGTCAAATCAAATGTATTG
 
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JMSF028O19+ TATAT
JMSF008O16+ TATATGAAACGAGAATCGTATTCGTAGTCGTATATATATACATACGCGTCGGTATAGGTC
                      ____________________________________________________________
consensus TATATGAAACGAGAATCGTATTCGTAGTCGTATATATATACATACGCGTCGGTATAGGTC