| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004F24 | Sequence | 453 | 006398 (6) | ref|XP_009610450.1| | 5e-36 | PREDICTED: vinorine synthase-like [Nicotiana tomentosiformis] | 737 | 012356 (4) | ref|XP_006380880.1| | 5e-20 | hypothetical protein POPTR_0006s01180g [Populus trichocarpa] gb|ERP58677.1| hypo |
| JMFF014D07 | Sequence | 582 | 006398 (6) | ref|XP_009342764.1| | 3e-27 | PREDICTED: vinorine synthase-like [Pyrus x bretschneideri] | 667 | 012356 (4) | ref|XP_007037900.1| | 1e-15 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Theobroma cacao] g |
| JMFF033C13 | Sequence | 541 | 006398 (6) | gb|KDO37672.1| | 7e-45 | hypothetical protein CISIN_1g0394691mg, partial [Citrus sinensis] | 713 | 012356 (4) | ref|XP_007037900.1| | 2e-15 | 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase, putative [Theobroma cacao] g |
| JMSF007K21 | Sequence | 284 | 006398 (6) | ref|XP_009359305.1| | 6e-14 | PREDICTED: vinorine synthase [Pyrus x bretschneideri] | 783 | 013956 (2) | ref|XP_002308780.1| | 2e-29 | hypothetical protein POPTR_0006s01190g [Populus trichocarpa] gb|EEE92303.1| hypo |
| JMSF020G18 | Sequence | 660 | 006398 (6) | ref|XP_009610450.1| | 4e-46 | PREDICTED: vinorine synthase-like [Nicotiana tomentosiformis] | 771 | 013956 (2) | ref|XP_011008627.1| | 1e-25 | PREDICTED: vinorine synthase-like [Populus euphratica] |
| JMSF038C12 | Sequence | 649 | 006398 (6) | ref|XP_009610450.1| | 3e-46 | PREDICTED: vinorine synthase-like [Nicotiana tomentosiformis] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF014D07+ CGGCTTCCA
____________________________________________________________
consensus CGGCTTCCA
. : . : . : . : . : . :
JMFF014D07+ ATTCCCACCGAGCGGCCACCATTTGGTAGATGTTGCCTAGGCACTGCGAAGGGAATGGCG
____________________________________________________________
consensus ATTCCCACCGAGCGGCCACCATTTGGTAGATGTTGCCTAGGCACTGCGAAGGGAATGGCG
. : . : . : . : . : . :
JMFF014D07+ GGTTCAACTTATTTCGCACGTTAATCATTTTTGTCAGCAAATGCATCTTGAGGTTTGGGT
____________________________________________________________
consensus GGTTCAACTTATTTCGCACGTTAATCATTTTTGTCAGCAAATGCATCTTGAGGTTTGGGT
. : . : . : . : . : . :
JMFF014D07+ TCGCCTGTAGAGTTGCCCGTATCACCGCCGCCCATACGAAAGCCGACAACGCCTCCACCC
____________________________________________________________
consensus TCGCCTGTAGAGTTGCCCGTATCACCGCCGCCCATACGAAAGCCGACAACGCCTCCACCC
. : . : . : . : . : . :
JMFF014D07+ GAGACGGACGGCGGCTGTGCTCCGATGGCTGATAATAATCGTTTCTGATCCGCTCAATAT
____________________________________________________________
consensus GAGACGGACGGCGGCTGTGCTCCGATGGCTGATAATAATCGTTTCTGATCCGCTCAATAT
. : . : . : . : . : . :
JMFF014D07+ CCCGCTTGCAAAGAACAAATCTTTTCGAGGAGTACTTACCCTGTTTCTCGAGGGGAAAGG
____________________________________________________________
consensus CCCGCTTGCAAAGAACAAATCTTTTCGAGGAGTACTTACCCTGTTTCTCGAGGGGAAAGG
. : . : . : . : . : . :
JMFF014D07+ GCTTTAGCGGGGAGCTGACGAGGTTCCCCGGCCTGAAAGTTGCGGAGGCGTCCGCGATGA
JMSF020G18+ GGAGCTGAAGAGGTTCCCCGGCCTGAAAATTGTGGAGGCGTCCACGACGA
JMSF038C12+ GGAGCTGAAGAGGTTCCCCGGCCTGAAAATTGTGGAGGCGTCCACGACGA
____________________________________________________________
consensus GCTTTAGCGGGGAGCTGAAGAGGTTCCCCGGCCTGAAAATTGTGGAGGCGTCCACGACGA
. : . : . : . : . : . :
JMFF014D07+ GACCGCCGGGATTAATGGGTCCTTCTCCGCGGTTGATTGCCGCCCATGTGTTAAATAATC
JMSF020G18+ GTCCGCCGGGATTACTGGGTCCTTCCCCGCGGTTGATTGCCGTCCATGTGTTAAATAATC
JMFF033C13+ CCGCGGTTGATTGCCGCCCATGTGTTAAATAATC
JMSF038C12+ GTCCGCCGGGATTACTGGGTCCTTCCCCGCGGTTGATTGCCGTCCATGTGTTAAATAATC
____________________________________________________________
consensus GTCCGCCGGGATTACTGGGTCCTTCCCCGCGGTTGATTGCCGTCCATGTGTTAAATAATC
. : . : . : . : . : . :
JMFF014D07+ CGGTCATCGCGCCGCCGTCCGCCAGGCCGTGCCAAATGCAGAAACCCACCGCAGTTCCGC
JMSF020G18+ CGACCATCGCGGCGCCGTCCGCCAGGCCGTGCCAAATGCAGAACGCCACCGCAGTTCCGC
JMFF004F24+ GCCAAATGCAGAACCCCACCGCAGTTCCGC
JMFF033C13+ CGGTCATCGCGCCGCCGTCCGCCAGGCCGTGCCAAATGCAGAACCCCACCGCAGTTCCGC
JMSF038C12+ CGACCATCGCGGCGCCGTCCGCCAGGCCGTGCCAAATGCAGAACGCCACCGCAGTTCCGC
____________________________________________________________
consensus CGGTCATCGCGGCGCCGTCCGCCAGGCCGTGCCAAATGCAGAACCCCACCGCAGTTCCGC
. : . : . : . : . : . :
JMFF014D07+ CGCACCGGAATGTGTTGACCTGAACAGCTAACATTGGCAGGGCGGAGTGAATAGGGTTTG
JMSF020G18+ CGCACCGGAATGTGTTGACCTGAACAGCTAACATTGGCATGGCGGAGTGAATAGGGTTTG
JMFF004F24+ CGCACCGGAATGTGTTGACCTGAACAGCTAACATTGGCAGGGCGGAGTGAATAGGGTTTG
JMFF033C13+ CGCACCGGAATGTGTTGACCTGAACAGCTAACATTGGCAGGGCGGAGTGAATAGGGTTTG
JMSF038C12+ CGCACCGGAATGTGTTGACCTGAACAGCTAACATTGGCATGGCGGAGTGAATAGGGTTTG
____________________________________________________________
consensus CGCACCGGAATGTGTTGACCTGAACAGCTAACATTGGCAGGGCGGAGTGAATAGGGTTTG
. : . : . : . : . : . :
JMFF014D07+ GGTAGGGATCAAGTGGGAGCAGCTGGCGTATAT
JMSF020G18+ GGTAGGGATCAAGTGGGAGCAGCTGGCGTATATCTTCGAGTTTGGGGTGCCGGAGAAGCT
JMFF004F24+ GGTAGGGATCAAGTGGGAGCAGCTGGCGTATATCTTCGTGTTTGGGGTGCCGGAGAAACT
JMFF033C13+ GGTAGGGATCAAGTGGGAGCAGCTGGCGTATATCTTCGTGTTTGGGGTGCCGGAGAAACT
JMSF038C12+ GGTAGGGATCAAGTGGGAGCAGCTGGCGTATATCTTCGAGTTTGGGGTGCCGGAGAAGCT
____________________________________________________________
consensus GGTAGGGATCAAGTGGGAGCAGCTGGCGTATATCTTCGTGTTTGGGGTGCCGGAGAAGCT
. : . : . : . : . : . :
JMSF020G18+ CACCCAAATCACAATTGGTAACTTTAGCTAGGACAAAATCCGCACCCTCGTCGTTGCATT
JMFF004F24+ CACCCAAATCACAATTGGTAACTTTAGCTAGGACAAAATCCGCACCCTCGTCGTTGCATT
JMFF033C13+ CACCCAAATCACAATTGGTAACTTTAGCTAGGACAAAATCCGCACCCTCGTCGTTGCATT
JMSF038C12+ CACCCAAATCACAATTGGTAACTTTAGCTAGGACAAAATCCGCACCCTCGTCGTTGCATT
____________________________________________________________
consensus CACCCAAATCACAATTGGTAACTTTAGCTAGGACAAAATCCGCACCCTCGTCGTTGCATT
. : . : . : . : . : . :
JMSF020G18+ CGATGGTCGATGCATCTTTAATTCTTCCGGCGAGCGGATATAAGAGGGACAGTGTCTTCA
JMFF004F24+ CGATGGTCGATGCATCTTTAATTCTTCCGGCGAGCGGATACAAGAGGGACAGTGTCTTCA
JMFF033C13+ CGATGGTCGATGCATCTTTAATTCTTCCGGCGAGCGGATACAAGAGGGACAGTGTCTTCA
JMSF038C12+ CGATGGTCGATGCATCTTTAATTCTTCCGGCGAGCGGATATAAGAGGGACAGTGTCTTCA
____________________________________________________________
consensus CGATGGTCGATGCATCTTTAATTCTTCCGGCGAGCGGATATAAGAGGGACAGTGTCTTCA
. : . : . : . : . : . :
JMSF020G18+ TGAGCGAGTTCTTGAGCGAGTCATAATCGTGGCGACTGGCACCGGAGTTGTAGAAGAAAA
JMFF004F24+ TGAGCGAGTTCTTGAGCTCATCATAATCGTGGCGATCGGCGCCGGAGTTGTAGAAGAAAA
JMFF033C13+ TGAGCGAGTTCTTGAGCTCATCATAATCGTGGCGATCGGCGCCGGAGTTGTAGAAGAAAA
JMSF038C12+ TGAGCGAGTTCTTGAGCGAGTCATAATCGTGGCGACTGGCACCGGAGTTGTAGAAGAAAA
JMSF007K21+ GGAGTTGTAGAAGAAAA
____________________________________________________________
consensus TGAGCGAGTTCTTGAGCTCGTCATAATCGTGGCGATTGGCGCCGGAGTTGTAGAAGAAAA
. : . : . : . : . : . :
JMSF020G18+ CATAGGGGTTATAATAAGTGGAGGCTATCATATCAAGGAGAGAAAGCTTGTAGTTTCTCA
JMFF004F24+ CAAAGGGGTTATAATAAGTCGAGGATATTATATCAATGAGAGAAAGCTTGTAGTTTCTCA
JMFF033C13+ CAAAGGGGTTATAATAAGTCGAGGATATTATATCAATGAGAGAAAGCTTGTAGTTTCTCA
JMSF038C12+ CATAGGGGTTATAATAAGTGGAGGCTATCATATCAAGGAGAGAAAGCTTGTAGTTTCTCA
JMSF007K21+ CAAAGGGGTTATAAAAAGTCGAGACTAATATATCAAGGAGAGAAAGCTTGTAGTTTCTCA
____________________________________________________________
consensus CAAAGGGGTTATAATAAGTCGAGGCTATTATATCAAGGAGAGAAAGCTTGTAGTTTCTCA
. : . : . : . : . : . :
JMSF020G18+ AGGTTTGGGGAGTTGGTGAACATGGCCTCACTCTCTCTTTCTGATAAACTTCAACTTTAA
JMFF004F24+ AGGTTTGGGGAGTTGGTGAACATGGCCTCACTCTCTCTTTCTGATAAACTTCAACTTTCA
JMFF033C13+ AGGTTTGGGGAGTTGGTGAACATGGCCTCACTCTCTCTTTCTGATAAACTTCAACTTTCA
JMSF038C12+ AGGTTTGGGGAGTTGGTGAACATGGCCTCACTCTCTCTTTCTGATAAACTTCAACTTTAA
JMSF007K21+ AGGTTTGGGGAGTTGGTGAACCTGGCCTCACTTTCTCTTTCTGATAAACTTCAATTTTCA
____________________________________________________________
consensus AGGTTTGGGGAGTTGGTGAACATGGCCTCACTCTCTCTTTCTGATAAACTTCAACTTTCA
. : . : . : . : . : . :
JMSF020G18+ GGGCCATTGAATCGAT
JMFF004F24+ GGG
JMFF033C13+ GGGCCATTGAATCGAT
JMSF038C12+ GGGCCATTGAATCGAT
JMSF007K21+ GGGCCATTGGATCGATTGATACCTTATTTCATAACGCCCACTTATGATCACATATGCGTC
____________________________________________________________
consensus GGGCCATTGAATCGATTGATACCTTATTTCATAACGCCCACTTATGATCACATATGCGTC