Contig 006394:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF041I09Sequence658006394 (5)ref|XP_006362574.1|1e-06PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum574011148 (2)gb|AGX27500.1|1e-18NBS-LRR class resistance protein Fy2-Ry2 [Sesamum indicum]
JMFS013H01Sequence589006394 (5)ref|XP_006359790.1|2e-22PREDICTED: putative late blight resistance protein homolog R1B-17-like [Solanum
JMFS108D03Sequence642006394 (5)ref|XP_006362574.1|8e-07PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum
JMFS119F04Sequence614006394 (5)ref|XP_006362574.1|6e-07PREDICTED: putative late blight resistance protein homolog R1B-12-like [Solanum
JMSF007H14Sequence279006394 (5)750008436 (6)

Alignment

This contig is upended


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JMFS013H01+                                          TTCATCATCAAAACCAACCACATCTTCTC
                      ____________________________________________________________
consensus                                            TTCATCATCAAAACCAACCACATCTTCTC
 
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JMFS013H01+           TTTCTACCACCGGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGA
                      ____________________________________________________________
consensus             TTTCTACCACCGGAGCCATCCTCTGCATAATAGGTTGACCTCTGTTTGGGTCATCTATGA
 
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JMFS013H01+           GGGCCTGAAGAGCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTT
                      ____________________________________________________________
consensus             GGGCCTGAAGAGCTACGCTGTTGTCTTGCCTGATTTTCTTAACCTTGTCTCTGATGCTTT
 
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JMFS013H01+           GGATCTCTCTCGCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGA
                      ____________________________________________________________
consensus             GGATCTCTCTCGCAGAAACGTTAACCTTGGCGTAATAAGCAAGTGTTTCCAAGTATCTGA
 
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JMFS013H01+           GCACCCCTTTGTCTTTATACTTCTTCCGCCTCAATCACCACGTTTCGGATCTTCTCCACC
JMFS108D03+                                                                   CACC
JMFF041I09+                                                                    ACC
                      ____________________________________________________________
consensus             GCACCCCTTTGTCTTTATACTTCTTCCGCCTCAATCACCACGTTTCGGATCTTCTCCACC
 
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JMFS013H01+           ACGTCGTTCAGGACTTCATTGTCGCCGGCGCTTTGGTTCTTCGACGCTTGCTTCAGATAT
JMFS108D03+           ACGTCGTTCAGGACTTCGTTGTCGCCGGCGCTTTGGCTCTCCGACGCTTGCTTCAGATAT
JMFS119F04+                                                    CGACGCTTGCTTCAGATAT
JMFF041I09+           ACGTCGTTCAGGACTTCGTTGTCGCCGGCGCTTTGGCTCTCCGACGCTTGCTTCAGATAT
                      ____________________________________________________________
consensus             ACGTCGTTCAGGACTTCGTTGTCGCCGGCGCTTTGGCTCTCCGACGCTTGCTTCAGATAT
 
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JMFS013H01+           GCGTTGAACGTTTTCAGGTCGGACACTAGGTCGTCGATCTGATCTTTTATCCCGATTATT
JMFS108D03+           GCGTTGATCGTTGTCAGGTCGGACACTAGGTCTTCGATCTGATCCTTTATCCCGATTATT
JMFS119F04+           GCGTTGATCGTTGTCAGGTCGGACACTAGGTCTTCGATCTGATCCTTTATCCCGATTATT
JMFF041I09+           GCGTTGATCGTTGTCAGGTCGGACACTAGGTCTTCGATCTGATCCTTTATCCCGATTATT
                      ____________________________________________________________
consensus             GCGTTGATCGTTGTCAGGTCGGACACTAGGTCTTCGATCTGATCCTTTATCCCGATTATT
 
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JMFS013H01+           AGCGCCGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTCACCAGCTCCCCTACTAC    
JMFS108D03+           AACGACGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTCACCAGCTCCCCTACTA-----
JMFS119F04+           AACGACGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTCACCAGCTCCCCTACTACTGCA
JMFF041I09+           AACGACGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTCACCAGCTCCCCTACTACTGCA
                      ____________________________________________________________
consensus             AACGACGCGTTTTCCTCTACTGCTTGTGCTAGCCGGCTCACCAGCTCCCCTACTACTGCA
 
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JMFS108D03+           -CAGTAATGGGCGTATGACATATGAGGAGCTTAACAGTTTGGGCGTGGTCTTCCTTGATT
JMFS119F04+           TCAGTAATGGGCGTATGACATATGAGGAGCTTAACAGTTTGGGCGTGGTCTTCCTTGATT
JMFF041I09+           TCAGTAATGGGCGTATGACATATGAGGAGCTTAACAGTTTGGGCGTGGTCTTCCTTGATT
                      ____________________________________________________________
consensus             TCAGTAATGGGCGTATGACATATGAGGAGCTTAACAGTTTGGGCGTGGTCTTCCTTGATT
 
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JMFS108D03+           TTCTTAACCCTGTCTGTGATGCTCTGTATCTCTTCACTAAAATCGCGAATACATTTGGCT
JMFS119F04+           TTCTTAACCCTGTCTGTGATGCTCTGTATCTCTTCACTAAAATCGCGAATACATTTGGCT
JMFF041I09+           TTCTTAACCCTGTCTGTGATGCTCTGTATCTCTTCACTAAAATCGCGAATACATTTGGCT
                      ____________________________________________________________
consensus             TTCTTAACCCTGTCTGTGATGCTCTGTATCTCTTCACTAAAATCGCGAATACATTTGGCT
 
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JMFS108D03+           TCAGATCTAGCATGCTTCTTCCTCTCCACTGTGAACATACAGATTGCGTGTTCCGCATCA
JMFS119F04+           TCAGATCTAGCATGCTTCTTCCTCTCCACTGTGAACATACAGATTGCGTGTTCCGCATCA
JMFF041I09+           TCAGATCTAGCATGCTTCTTCCTCTCCACTGTGAACATACAGATTGCGTGTTCCGCATCA
                      ____________________________________________________________
consensus             TCAGATCTAGCATGCTTCTTCCTCTCCACTGTGAACATACAGATTGCGTGTTCCGCATCA
 
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JMFS108D03+           CTTATCACATTTCGGATCTTCTCCACCATGTCTTTTAGAGCATATTTGGCTCTTTCGTTC
JMFS119F04+           CTTATCACATTTCGGATCTTCTCCACCATGTCTTTTAGAGCATATTTGGCTCTTTCGTTC
JMFF041I09+           CTTATCACATTTCGGATCTTCTCCACCATGTCTTTTAGAGCATATTTGGCTCTTTCGTTC
JMSF007H14+                                TCCACCATGTCTTTTAGAGCATATTTGGCTCTTTCGTTN
                      ____________________________________________________________
consensus             CTTATCACATTTCGGATCTTCTCCACCATGTCTTTTAGAGCATATTTGGCTCTTTCGTTC
 
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JMFS108D03+           TCGGATGCTAGCTCCACAGTAGAGCTCAATGATTTGAGGCCTATCACCAGATCCGAGATC
JMFS119F04+           TCGGATGCTAGCTCCACAGTAGAGCTCAATGATTTGAGGCCTATCACCAGATCCGAGATC
JMFF041I09+           TCGGATGCTAGCTCCACAGTAGAGCTCAATGATTTGAGGCCTATCACCAGATCCGAGATC
JMSF007H14+           TCGGATGCTAGCTCCACAGTAGAGCTCAATGATTTGAGGCCTATCACCAGATCCGAGATN
                      ____________________________________________________________
consensus             TCGGATGCTAGCTCCACAGTAGAGCTCAATGATTTGAGGCCTATCACCAGATCCGAGATC
 
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JMFS108D03+           TGACTCTTTATCCCCATTTCAAACAACCTGTTTTCCTCAGCTAATTGTTCCAGTCGGTCT
JMFS119F04+           TGACTCTTTATCCCCATTTCAAACAACCTGTTTTCCTCAGCTAATTGTTCCAGTCGGTCT
JMFF041I09+           TGACTCTTTATCCCCATTTCAAACAACCTGTTTTCCTCAGCTAATTGTTCCAGTCGGTCT
JMSF007H14+           TGACTCTTTATCCCCATTTCAAACAACCTGTTTTCCTCAGNTAATTGTTCCAGTCGGTCT
                      ____________________________________________________________
consensus             TGACTCTTTATCCCCATTTCAAACAACCTGTTTTCCTCAGCTAATTGTTCCAGTCGGTCT
 
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JMFS108D03+           ACCCTCCCTGAGATAGATAATGCATCTTCCACGGCCATAGCAGATCAAGCTCAGATCTAG
JMFS119F04+           ACCCTCCCTGAGATAGATAATGCATCTTCCACGGCCATAGCAGATCAAGCTCAGATCTAG
JMFF041I09+           ACCCTCCCTGAGATAGATAATGCATCTTCCACGGCCATAGCAGATCAAGCTCAGATCTAG
JMSF007H14+           ACCCTCCCTGAGATAGATAATGCATNTTCCACGGCCATAGCAGATCAAGCTCAGATCTAG
                      ____________________________________________________________
consensus             ACCCTCCCTGAGATAGATAATGCATCTTCCACGGCCATAGCAGATCAAGCTCAGATCTAG
 
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JMFS108D03+           CGTTTGCTTATGA-TTTTTTTTTTCAACTCCGAGGTTTTAATTTC               
JMFS119F04+           CGTTTGCTTATGA-TTTTTTTTTTCAACTCCGAGGTTTTAATTTC               
JMFF041I09+           CGTTTGCTTATGA-TTTTTTTTTTCAACTCCGAGGTTTTAATTTCATACAA         
JMSF007H14+           CGTTTGCTTATGATTTTTTTTTTTCAACTCCGAGGTTTTAATTTCATACAAGCACCATCC
                      ____________________________________________________________
consensus             CGTTTGCTTATGA-TTTTTTTTTTCAACTCCGAGGTTTTAATTTCATACAAGCACCATCC