Contig 006393:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF007G15Sequence374006393 (2)799008680 (4)ref|XP_011101883.1|8e-127PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC
JMSF051J03Sequence675006393 (2)ref|XP_011101883.1|1e-18PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC742008680 (4)ref|XP_011101883.1|3e-118PREDICTED: scarecrow-like protein 1 [Sesamum indicum] ref|XP_011101887.1| PREDIC

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF051J03+ TCCGAGGATGAAGATTCATTTTGAAACAGACTACAAATTGGATCAACTTCCATACTT
                      ____________________________________________________________
consensus TCCGAGGATGAAGATTCATTTTGAAACAGACTACAAATTGGATCAACTTCCATACTT
 
. : . : . : . : . : . :
JMSF051J03+ TGAGCACACCCAAACATCATATCATCATCATCATTATCATCAAGAAGTGCTCTCTCCAGT
                      ____________________________________________________________
consensus TGAGCACACCCAAACATCATATCATCATCATCATTATCATCAAGAAGTGCTCTCTCCAGT
 
. : . : . : . : . : . :
JMSF051J03+ TCTTGAATCTTCAATCTCACATTACCTTCTTCCAAGCCTAGGGGATCAGGACTTTGCCCA
                      ____________________________________________________________
consensus TCTTGAATCTTCAATCTCACATTACCTTCTTCCAAGCCTAGGGGATCAGGACTTTGCCCA
 
. : . : . : . : . : . :
JMSF051J03+ GATATGTACTCCGAATCATAATTAATTTGATAAGTATCACATTTCCTCAAGGATTGGATA
                      ____________________________________________________________
consensus GATATGTACTCCGAATCATAATTAATTTGATAAGTATCACATTTCCTCAAGGATTGGATA
 
. : . : . : . : . : . :
JMSF051J03+ GAGCTTAGAGAATTTTCGCCTGACGAAACTGGGCATGGAGGAGGACGATGCTGGAATGAA
                      ____________________________________________________________
consensus GAGCTTAGAGAATTTTCGCCTGACGAAACTGGGCATGGAGGAGGACGATGCTGGAATGAA
 
. : . : . : . : . : . :
JMSF051J03+ TTTACCAAAGCTTCAGAAGCAGACGGGTGCACAAGCTCAGATGATGGGGATGGGGATGGG
                      ____________________________________________________________
consensus TTTACCAAAGCTTCAGAAGCAGACGGGTGCACAAGCTCAGATGATGGGGATGGGGATGGG
 
. : . : . : . : . : . :
JMSF051J03+ GAATCTATGAAGTAGTTTGCATCATAACTTCCACTGCTGTAAGATTCAGCTGCTGCATAT
                      ____________________________________________________________
consensus GAATCTATGAAGTAGTTTGCATCATAACTTCCACTGCTGTAAGATTCAGCTGCTGCATAT
 
. : . : . : . : . : . :
JMSF051J03+ GCTATCTCACGCTTTTCTGGGTTGAACATGGTTGTAGACAAGCCAGTGGAGTTGTCGCCA
JMSF007G15+ TGGAGTNGTCGCCA
                      ____________________________________________________________
consensus GCTATCTCACGCTTTTCTGGGTTGAACATGGTTGTAGACAAGCCAGTGGAGTTGTCGCCA
 
. : . : . : . : . : . :
JMSF051J03+ TGACCATTCAGCAAATACAATTTACGGTTTCCAAATGGAGTGGATGATCTAACTAAGGGC
JMSF007G15+ TGACCATTCAGCAAATACAATTTACGGTTTCCAAATGGAGTGGATGATCTAACTAAGGGC
                      ____________________________________________________________
consensus TGACCATTCAGCAAATACAATTTACGGTTTCCAAATGGAGTGGATGATCTAACTAAGGGC
 
. : . : . : . : . : . :
JMSF051J03+ ATGGTTTCCTTCTTCAAAACTATGCTGCTTTCTAAATGATATTATTTTCCCTTGTGCTGC
JMSF007G15+ ATGGTTTCCTTCTTCAAAACTATGCTGCTTTCTAAATGATATTATTTTCCCTTGTGCTGC
                      ____________________________________________________________
consensus ATGGTTTCCTTCTTCAAAACTATGCTGCTTTCTAAATGATATTATTTTCCCTTGTGCTGC
 
. : . : . : . : . : . :
JMSF051J03+ AAACTC
JMSF007G15+ AAACTCTTTTTCCAGAACACACAAGGGATCGGAAGAGATCTCAAGATGAGACAACTGAAA
                      ____________________________________________________________
consensus AAACTCTTTTTCCAGAACACACAAGGGATCGGAAGAGATCTCAAGATGAGACAACTGAAA
 
. : . : . : . : . : . :
JMSF007G15+ CACAATCAACAACAATAATCTCCCACTGATTTTCTGAATTGCCTTAGAACCTTCCCAGTT
                      ____________________________________________________________
consensus CACAATCAACAACAATAATCTCCCACTGATTTTCTGAATTGCCTTAGAACCTTCCCAGTT
 
. : . : . : . : . : . :
JMSF007G15+ GAGAAAAATTCAACCCTACTCGTAGTCTCGTAGCCGTTGGATTTGGATTCTCACCAAGTA
                      ____________________________________________________________
consensus GAGAAAAATTCAACCCTACTCGTAGTCTCGTAGCCGTTGGATTTGGATTCTCACCAAGTA
 
. : . : . : . : . : . :
JMSF007G15+ GGAATACCTTTTTTTTCCGTGTTCTTTTCCTTTATTATCAGATTAGATTAGATGCTGCTC
                      ____________________________________________________________
consensus GGAATACCTTTTTTTTCCGTGTTCTTTTCCTTTATTATCAGATTAGATTAGATGCTGCTC