Contig 006389:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS013D02Sequence613006389 (4)ref|XP_009609344.1|1e-101PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Nicotiana tomentosifo
JMSF006J04Sequence217006389 (4)ref|XP_009609344.1|3e-07PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Nicotiana tomentosifo
JMSF033J07Sequence657006389 (4)ref|XP_009609344.1|1e-108PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Nicotiana tomentosifo
JMSF052L20Sequence692006389 (4)ref|XP_009609344.1|2e-115PREDICTED: heat shock 70 kDa protein, mitochondrial-like [Nicotiana tomentosifo

Alignment

This contig is upended


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JMSF033J07+                                                            TTCCCAGATAA
JMSF052L20+                         AGCTGGAACAGTGATCACAGCCTTTGTTACAGTCTTTCCCAGATAA
                      ____________________________________________________________
consensus                           AGCTGGAACAGTGATCACAGCCTTTGTTACAGTCTTTCCCAGATAA
 
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JMSF033J07+           GATTCTGCAGTTTCCTTCATTTTTGTTAGAACAAAGGCTCCAACTTGACTTGGAGAATAT
JMFS013D02+                               TTTTGTTAGAACAAAGGCTCCAACTTGACTTGGAGAATAT
JMSF052L20+           GATTCTGCAGTTTCCTTCATTTTTGTTAGAACAAAGGCTCCAACTTGACTTGGAGAATAT
                      ____________________________________________________________
consensus             GATTCTGCAGTTTCCTTCATTTTTGTTAGAACAAAGGCTCCAACTTGACTTGGAGAATAT
 
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JMSF033J07+           TGTTGTCCATTCGCTTCCACCCAAGCATCTCCATTGGGAGCTTTCACAATTTTGAATGGA
JMFS013D02+           TGTTGTCCATTCGCTTCCACCCAAGCATCTCCATTGGGAGCTTTCACAATTTTGAATGGA
JMSF052L20+           TGTTGTCCATTCGCTTCCACCCAAGCATCTCCATTGGGAGCTTTCACAATTTTGAATGGA
                      ____________________________________________________________
consensus             TGTTGTCCATTCGCTTCCACCCAAGCATCTCCATTGGGAGCTTTCACAATTTTGAATGGA
 
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JMSF033J07+           ACCATTTTCATTTCCTTCTGTGTCTGGGGATCATCAAAGCGTCTACCAATTAGACGTTTG
JMFS013D02+           ACCATTTTCATTTCCTTCTGTGTCTGGGGATCATCAAAGCGTCTACCAATTAGACGTTTG
JMSF052L20+           ACCATTTTCATTTCCTTCTGTGTCTGGGGATCATCAAAGCGTCTACCAATTAGACGTTTG
                      ____________________________________________________________
consensus             ACCATTTTCATTTCCTTCTGTGTCTGGGGATCATCAAAGCGTCTACCAATTAGACGTTTG
 
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JMSF033J07+           GTCCCAAAGAGAGTGTTTGTGGGATTTGTGACAGCCTGACGTTTGGCTGGTGTACCAACA
JMFS013D02+           GTCCCAAAGAGAGTGTTTGTGGGATTTGTGACAGCCTGACGTTTGGCTGGTGTACCAACA
JMSF052L20+           GTCCCAAAGAGAGTGTTTGTGGGATTTGTGACAGCCTGACGTTTGGCTGGTGTACCAACA
                      ____________________________________________________________
consensus             GTCCCAAAGAGAGTGTTTGTGGGATTTGTGACAGCCTGACGTTTGGCTGGTGTACCAACA
 
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JMSF033J07+           AGTAATTCTCCTTTCTGGTTAAAAGCAACTACAGAAGGTGTGGTACGAGATCCTTCAGAA
JMFS013D02+           AGTAATTCTCCTTTCTGGTTAAAAGCAACTACAGAAGGTGTGGTACGAGATCCTTCAGAA
JMSF052L20+           AGTAATTCTCCTTTCTGGTTAAAAGCAACTACAGAAGGTGTGGTACGAGATCCTTCAGAA
                      ____________________________________________________________
consensus             AGTAATTCTCCTTTCTGGTTAAAAGCAACTACAGAAGGTGTGGTACGAGATCCTTCAGAA
 
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JMSF033J07+           TTTTCAATCACTTTAGGAGTCTTGCCCTCCATGACAGAAACACAGGAGTTTGTGGTACCC
JMFS013D02+           TTTTCAATCACTTTAGGAGTCTTGCCCTCCATGACAGAAACACAGGAGTTTGTGGTACCC
JMSF052L20+           TTTTCAATCACTTTAGGAGTCTTGCCCTCCATGACAGAAACACAGGAGTTTGTGGTACCC
                      ____________________________________________________________
consensus             TTTTCAATCACTTTAGGAGTCTTGCCCTCCATGACAGAAACACAGGAGTTTGTGGTACCC
 
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JMSF033J07+           AAGTCAATGCCTATAATATCATTTCCAGCTGGTTTTGAGCTAAATGGTCTGGCCAGGCTA
JMFS013D02+           AAGTCAATGCCTATAATATCATTTCCAGCTGGTTTTGAGCTAAATGGTCTGGCCAGGCTA
JMSF052L20+           AAGTCAATGCCTATAATATCATTTCCAGCTGGTTTTGAGCTAAATGGTCTGGCCAGGCTA
                      ____________________________________________________________
consensus             AAGTCAATGCCTATAATATCATTTCCAGCTGGTTTTGAGCTAAATGGTCTGGCCAGGCTA
 
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JMSF033J07+           GCCCATCTAGCACTTCCGATTGAGGGATTAGTGTTGGCAGCAAAGGCCTTGTAGGCAGAG
JMFS013D02+           GCCCATCTAGCACTTCCGATTGAGGGATTAGTGTTGGCAGCAAAGGCCTTGTAGGCAGAG
JMSF052L20+           GCCCATCTAGCACTTCCGATTGAGGGATTAGTGTTGGCAGCAAAGGCCTTGTAGGCAGAG
JMSF006J04+                                  GGGATTAGTGTTGGCAGCAAAGGCCTTGTAGGCAGAG
                      ____________________________________________________________
consensus             GCCCATCTAGCACTTCCGATTGAGGGATTAGTGTTGGCAGCAAAGGCCTTGTAGGCAGAG
 
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JMSF033J07+           AGAGAGGAGGTAGCAAGGTCACGGCGACGGAGAGATCTGAGCAAGACGGCGGTCGCCATT
JMFS013D02+           AGAGAGGAGGTAGCAAGGTCACGGCGACGGAGAGATCTGAGCAAGACGGCGGTCGCCATT
JMSF052L20+           AGAGAGGAGGTAGCAAGGTCACGGCGACGGAGAGATCTGAGCAAGACGGCGGTCGCCATT
JMSF006J04+           AGAGAGGAGGTAGCAAGGTCACGGCGACGGAGAGATCTGAGCAAGACGGCGGTCGCCATT
                      ____________________________________________________________
consensus             AGAGAGGAGGTAGCAAGGTCACGGCGACGGAGAGATCTGAGCAAGACGGCGGTCGCCATT
 
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JMSF033J07+           TGATCAGTGATGCAGCGTTTGCTCCTTCGGCTTTGCTTCCGGAAGTTTCTGTTGCTTAGG
JMFS013D02+           TGATCAGTGATGCAGCGTTTGCTCCTTCGGCTTTGCTTCCGGAAGTTTCTGTTGCTTAGG
JMSF052L20+           TGATCAGTGATGCAGCGTTTGCTCCTTCGGCTTTGCTTCCGGAAGTTTCTGTTGCTTAGG
JMSF006J04+           TGATCAGTGATGCAGCGTTTGCTCCTTCGGCTTTGCTTCCGGAAGTTTCTGTTGCTTAGG
                      ____________________________________________________________
consensus             TGATCAGTGATGCAGCGTTTGCTCCTTCGGCTTTGCTTCCGGAAGTTTCTGTTGCTTAGG
 
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JMSF033J07+           GTTTAGGGTTTTAGAGAGAGGCTGAGTGAAATGCGTCGAGGCGGC               
JMFS013D02+           GTTTAGGGTTTTAGAGAGAG                                        
JMSF052L20+           GTTTAGGGTTTTAGAGAGAGGCTGAGTGAAATGCGTCGAGGCGGC               
JMSF006J04+           GTTTAGGGTTTTAGAGAGAGGCTGAGTGAAATGCGTCGAGGCGGCGAGTAGATCTTTCCC
                      ____________________________________________________________
consensus             GTTTAGGGTTTTAGAGAGAGGCTGAGTGAAATGCGTCGAGGCGGCGAGTAGATCTTTCCC