Contig 006367:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS058E05Sequence597006367 (4)ref|XP_008449685.1|6e-86PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic [Cucumis melo]
JMFS118B12Sequence626006367 (4)ref|XP_008449685.1|2e-44PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic [Cucumis melo]
JMSF004F15Sequence245006367 (4)350008523 (2)gb|AFK36310.1|7e-31unknown [Lotus japonicus]
JMSF022J17Sequence694006367 (4)ref|XP_008449685.1|3e-88PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic [Cucumis melo]796008523 (2)emb|CBI17197.3|5e-122unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF022J17+ CCTCGATGAGN
                      ____________________________________________________________
consensus CCTCGATGAGN
 
. : . : . : . : . : . :
JMFS058E05+ CAGGTTGAAAAACAGTGGTTCCAGATTTCACAGACTCCTCAACATCA
JMSF022J17+ TCTGCCAGAAGGCCAGGTTGAAAAACAGTGGTTCCAGATTTCACAGACTCCTCAACATCA
                      ____________________________________________________________
consensus TCTGCCAGAAGGCCAGGTTGAAAAACAGTGGTTCCAGATTTCACAGACTCCTCAACATCA
 
. : . : . : . : . : . :
JMFS058E05+ ACTGATCCAATCAATCTATCTTCAGTTACACCAAGGGGAATCTGAACAAAAGGAGATTTA
JMSF022J17+ ACTGATCCAATCAATCTATCTTCAGTTACACCAAGGGGAATCTGAACAAAAGGAGATTTA
                      ____________________________________________________________
consensus ACTGATCCAATCAATCTATCTTCAGTTACACCAAGGGGAATCTGAACAAAAGGAGATTTA
 
. : . : . : . : . : . :
JMFS058E05+ ATTATCTCTGTCTTAATATTACCAGCGGAGTCATACTCTACTCTATCAGCAAGTCCATCT
JMSF022J17+ ATTATCTCTGTCTTAATATTACCAGCGGAGTCATACTCTACTCTATCAGCAAGTCCATCT
                      ____________________________________________________________
consensus ATTATCTCTGTCTTAATATTACCAGCGGAGTCATACTCTACTCTATCAGCAAGTCCATCT
 
. : . : . : . : . : . :
JMFS058E05+ TCCCACTCTTCAGGACAGGTAGGATCAGCATTTGAAATGGAGCCTTTAACTATTTCAATT
JMFS118B12+ ACTCTTCAGGACAGGTAGGATCAGCATTTGAAATGGAGCCTTTAACTATTTCAATT
JMSF022J17+ TCCCACTCTTCAGGACAGGTAGGATCAGCATTTGAAATGGAGCCTTTAACTATTTCAATT
                      ____________________________________________________________
consensus TCCCACTCTTCAGGACAGGTAGGATCAGCATTTGAAATGGAGCCTTTAACTATTTCAATT
 
. : . : . : . : . : . :
JMFS058E05+ GGAGGCAGAACTGCATGCAATCCACGAGCCATCACAGTTTTGGCCGTCCCACGTTTTCCA
JMFS118B12+ GGAGGCAGAACTGCATGCAATCCACGAGCCATCACAGTTTTGGCCGTCCCACGTTTTCCA
JMSF022J17+ GGAGGCAGAACTGCATGCAATCCACGAGCCATCACAGTTTTGGCCGTCCCACGTTTTCCA
                      ____________________________________________________________
consensus GGAGGCAGAACTGCATGCAATCCACGAGCCATCACAGTTTTGGCCGTCCCACGTTTTCCA
 
. : . : . : . : . : . :
JMFS058E05+ GATATCGCAATTCCTCCTATATTGCGGTCAATCGCCCCAAGTAGAAGAGCAGTTTTAATA
JMFS118B12+ GATATCGCAATTCCTCCTATATTGCGGTCAATCGCCCCAAGTAGAAGAGCAGTTTTAATA
JMSF022J17+ GATATCGCAATTCCTCCTATATTGCGGTCAATCGCCCCAAGTAGAAGAGCAGTTTTAATA
                      ____________________________________________________________
consensus GATATCGCAATTCCTCCTATATTGCGGTCAATCGCCCCAAGTAGAAGAGCAGTTTTAATA
 
. : . : . : . : . : . :
JMFS058E05+ GCATCCTGTCCGACGACGGCAGCTAAAGGGAAGTACTGCCTGCCGTAAGCAGTGGTGTCG
JMFS118B12+ GCATCCTGTCCGACGACGGCAGCTAAAGGGAAGTACTGCCTGCCGTAAGCAGTGGTGTCG
JMSF022J17+ GCATCCTGTCCGACGACGGCAGCTAAAGGGAAGTACTGCCTGCCGTAAGCAGTGGTGTCG
                      ____________________________________________________________
consensus GCATCCTGTCCGACGACGGCAGCTAAAGGGAAGTACTGCCTGCCGTAAGCAGTGGTGTCG
 
. : . : . : . : . : . :
JMFS058E05+ GCGGCGGGCTTCTGAGGCGCAGCGACGACGCTTCCGTTGGCACTGGCATTGATTCTGAAG
JMFS118B12+ GCGGCGGGCTTCTGAGGCGCAGCGACGACGCTTCCGTTGGCACTGGCATTGATTCTGAAG
JMSF022J17+ GCGGCGGGCTTCTGAGGCGCAGCGACGACGCTTCCGTTGGCACTGGCATTGATTCTGAAG
JMSF004F15+ TGAAG
                      ____________________________________________________________
consensus GCGGCGGGCTTCTGAGGCGCAGCGACGACGCTTCCGTTGGCACTGGCATTGATTCTGAAG
 
. : . : . : . : . : . :
JMFS058E05+ CGAAGCCTGTGTGGTCGTCGTCCTGAAGGCCTAAGAGAAGGAGTAGAGAGAGTGGGGAGC
JMFS118B12+ CGAAGCCTGTGTGGTCGTCGTCCTGAAGGCCTAAGAGAAGGAGTAGAGAGAGTGGGGAGC
JMSF022J17+ CGAAGCCTGTGTGGTCGTCGTCCTGAAGGCCTAAGAGAAGGAGTAGAGAGAGTGGGGAGC
JMSF004F15+ CGAAGCCTGTGTGGTCGTCGTCCTGAAGGCCTAAGAGAAGGAGTAGAGAGAGTGGGGAGC
                      ____________________________________________________________
consensus CGAAGCCTGTGTGGTCGTCGTCCTGAAGGCCTAAGAGAAGGAGTAGAGAGAGTGGGGAGC
 
. : . : . : . : . : . :
JMFS058E05+ AGAAACTTGAAGCGCAGAGTAGTGGAAAAGGGCGCAGTATGCGATGGATTCGCTGGTAAT
JMFS118B12+ AGAAACTTGAAGCGCAGAGTAGTGGAAAAGGGCGCAGTATGCGATGGATTCGCTGGTAAT
JMSF022J17+ AGAAACTTGAAGCGCAGAGTAGTGGAAAAGGGCGCAGTATGCGATGGATTCGCTGGTAAT
JMSF004F15+ AGAAACTTGAAGCGCAGAGTAGTGGAAAAGGGCGCAGTATGCGATGGATTCGCTGGTAAT
                      ____________________________________________________________
consensus AGAAACTTGAAGCGCAGAGTAGTGGAAAAGGGCGCAGTATGCGATGGATTCGCTGGTAAT
 
. : . : . : . : . : . :
JMFS058E05+ GTAGAAGAGA
JMFS118B12+ GTAGAAGAGAGCACCATTGGGCTACTGAAATGCGGAGAAGAAAGGGAAAGAGGAGGAAAG
JMSF022J17+ GTAGAAGAGAGCACCATTGGGCTACTGAAATGCGGAGAAGAAAGGGAAAGAGGAGGAAAG
JMSF004F15+ GTAGAAGAGAGCACCATTGGGCTACTGAAATGCGGAGAAGAAAGGGAAAGAGGAGGAAAG
                      ____________________________________________________________
consensus GTAGAAGAGAGCACCATTGGGCTACTGAAATGCGGAGAAGAAAGGGAAAGAGGAGGAAAG
 
. : . : . : . : . : . :
JMFS118B12+ AAGCA
JMSF022J17+ AAGCAGTGGTGATTGTTTTCT
JMSF004F15+ AAGCAGTGGTGATTGTTTTCTTATCTTGGATTTGCCAGTGTTATCGCCATTTGTCACTTC
                      ____________________________________________________________
consensus AAGCAGTGGTGATTGTTTTCTTATCTTGGATTTGCCAGTGTTATCGCCATTTGTCACTTC