Contig 006358:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF052O19-                   ATTATCGCACCTCAAATACAAAAGAACTGTGAATCAAATTATGAACACAAA
                      ____________________________________________________________
consensus                      ATTATCGCACCTCAAATACAAAAGAACTGTGAATCAAATTATGAACACAAA
 
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rJMSF052O19-          CTATTGCATGCAGAAGTTACTTATAGTACTTACAAAGGAATTGAATTTAAGCAAACCTAA
                      ____________________________________________________________
consensus             CTATTGCATGCAGAAGTTACTTATAGTACTTACAAAGGAATTGAATTTAAGCAAACCTAA
 
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rJMSF052O19-          ACCATCAATAACCAATTCAATTCACAGAATCATAGTAGGTCGAGAAGCATGTAAAAAATT
                      ____________________________________________________________
consensus             ACCATCAATAACCAATTCAATTCACAGAATCATAGTAGGTCGAGAAGCATGTAAAAAATT
 
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rJMSF052O19-          TTAAGGAAACGAAACAAAGTTAAGGGCATAGTTGAAACAATACAAGTAGAGCAGGACCAG
                      ____________________________________________________________
consensus             TTAAGGAAACGAAACAAAGTTAAGGGCATAGTTGAAACAATACAAGTAGAGCAGGACCAG
 
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rJMSF052O19-          AACCAATTAGATTAGAGCAGAAGGGCAAAAGGAAAGTAAGGGGATGGAATATTGGGTTTG
                      ____________________________________________________________
consensus             AACCAATTAGATTAGAGCAGAAGGGCAAAAGGAAAGTAAGGGGATGGAATATTGGGTTTG
 
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rJMSF052O19-          TAGTTAGAGGTTTTGTAGGGAGTTTATGAGAGGTGCTGTTTTCTGTGCTTTTCAAGGCAT
                      ____________________________________________________________
consensus             TAGTTAGAGGTTTTGTAGGGAGTTTATGAGAGGTGCTGTTTTCTGTGCTTTTCAAGGCAT
 
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rJMSF052O19-          TAATGTTTATAATCAGAGGGCGCGGGAAAGACTCGAGTTTAACAATTTTCAATCCACTGA
                      ____________________________________________________________
consensus             TAATGTTTATAATCAGAGGGCGCGGGAAAGACTCGAGTTTAACAATTTTCAATCCACTGA
 
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rJMSF052O19-          TTAAGAAAGCTGAGGACCTGTCTTTCTTGGAGAAAGAAGATGGATTATTGGATTGGCGTC
JMSF052O19+                                                                 GGCGTC
                      ____________________________________________________________
consensus             TTAAGAAAGCTGAGGACCTGTCTTTCTTGGAGAAAGAAGATGGATTATTGGATTGGCGTC
 
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rJMSF052O19-          GCTAGAGATGATTGGAAAGGGTGGATGCGGAGAAGTTTACAAAGTTGAGTTACCTGGCCT
JMSF052O19+           GCTAGAGATGATTGGAAAGGGTGGATGCGGAGAAGTTTACAAAGTTGAGTTACCTGGCCT
                      ____________________________________________________________
consensus             GCTAGAGATGATTGGAAAGGGTGGATGCGGAGAAGTTTACAAAGTTGAGTTACCTGGCCT
 
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rJMSF052O19-          GGAAGTAATGGGAAGTTGATTGCTATAAATTAAAGAAGATTGTGCAGCCTGCTAGCTGAT
JMSF052O19+           GGAAGTAATGGGAAGTTGATTGCTATAAATTAAAGAAGATTGTGCAGCCTGCTAGCTGAT
                      ____________________________________________________________
consensus             GGAAGTAATGGGAAGTTGATTGCTATAAATTAAAGAAGATTGTGCAGCCTGCTAGCTGAT
 
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rJMSF052O19-          CTGAAGAAGATAGCAGGCTTATGAATAAGAAGATGCATGCCTCAGATAAAATCAGAAATT
JMSF052O19+           CTGAAGAAGATAGCAGGCTTATGAATAAGAAGATGCATGCCTCAGATAAAATCAGAAATT
                      ____________________________________________________________
consensus             CTGAAGAAGATAGCAGGCTTATGAATAAGAAGATGCATGCCTCAGATAAAATCAGAAATT
 
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rJMSF052O19-          CAGATTGTGGGTTAAATCAGGCATCGAAATCTACTTCCTCTGCTAGCTCATATGCCAATA
JMSF052O19+           CAGATTGTGGGTTAAATCAGGCATCGAAATCTACTTCCTCTGCTAGCTCATATGCCAATA
                      ____________________________________________________________
consensus             CAGATTGTGGGTTAAATCAGGCATCGAAATCTACTTCCTCTGCTAGCTCATATGCCAATA
 
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rJMSF052O19-          CCAGACTGTCATTACCTAGTTTATGAATTCATGAAGAACGGAAGCCTACAAGATGCACTT
JMSF052O19+           CCAGACTGTCATTACCTAGTTTATGAATTCATGAAGAACGGAAGCCTACAAGATGCACTT
                      ____________________________________________________________
consensus             CCAGACTGTCATTACCTAGTTTATGAATTCATGAAGAACGGAAGCCTACAAGATGCACTT
 
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rJMSF052O19-          CGCCCGGGCACCGGAGCGGAGCCACGTTGGATGCCGACNAGTC-ATCTTGACGCCGTANC
JMSF052O19+           CGCCCGGGCACCGGAGCGGAGCCACGTTGGATGCCGACAAGTCAATCTTGACGCCGTAGC
                      ____________________________________________________________
consensus             CGCCCGGGCACCGGAGCGGAGCCACGTTGGATGCCGACAAGTCAATCTTGACGCCGTAGC
 
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rJMSF052O19-          ANAACTTGGCAGCGGCCTCAAAAGTCTCGGAACCGCCCGGAAAA                
JMSF052O19+           AGAACTTGGCAGCGGCCTCAAAAGTCTCGGAACCGCCCGGAAAATTACGGAGCGAGATGT
                      ____________________________________________________________
consensus             AGAACTTGGCAGCGGCCTCAAAAGTCTCGGAACCGCCCGGAAAATTACGGAGCGAGATGT
 
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JMSF052O19+           GACATTGCAGCTCCTCAACACCTTCTTCTCATATCTCTCTGTCGCCATCTGGGTTTTGGA
JMFS027F10+                                                   GTCGCCATCTGGTTTTTGGA
JMFS147H03+                                                   GTCGCCATCTGGTTTTTGGA
                      ____________________________________________________________
consensus             GACATTGCAGCTCCTCAACACCTTCTTCTCATATCTCTCTGTCGCCATCTGGTTTTTGGA
 
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JMSF052O19+           CTCTAGCACCACTGGGTTTTGTCTCTTGCTCTGTTATCAATTCATGAAGCTTTCGACTTT
JMFS027F10+           CTCTAGCACCACTGGGTTTTGTCTCCTGCTCTGTTATCAATTCATGAAGCTTTCGACTTT
JMFS147H03+           CTCTAGCACCACTGGGTTTTGTCTCCTGCTCTGTTATCAATTCATGAAGCTTTCGACTTT
                      ____________________________________________________________
consensus             CTCTAGCACCACTGGGTTTTGTCTCCTGCTCTGTTATCAATTCATGAAGCTTTCGACTTT
 
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JMSF052O19+           TCGACATCAAAGGAAACTTGTGAAGATGGAAGGTCATGTCATATGCTTCGATTATCACAT
JMFS027F10+           TCGACATCAAAGGAAACTTGTGAAGATGGAAGGTCATGTCATCTGCTTCGATTACCACAT
JMFS147H03+           TCGACATCAAAGGAAACTTGTGAAGATGGAAGGTCATGTCATCTGCTTCGATTACCACAT
                      ____________________________________________________________
consensus             TCGACATCAAAGGAAACTTGTGAAGATGGAAGGTCATGTCATCTGCTTCGATTACCACAT
 
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JMSF052O19+           CGCTGGGTAACCTTGTATTGCAAAACC                                 
JMFS027F10+           CGCTGGGCAACCCAGTAGTGCAAAACCATGCTTGCCCTTTGGAAGTGGGTTTTTCAGAGT
JMFS147H03+           CGCTGGGCAACCCAGTAGTGCAAAACCATGCTTGCCCTTTGGAAGTGGGTTTTTCAGAGT
                      ____________________________________________________________
consensus             CGCTGGGCAACCCAGTAGTGCAAAACCATGCTTGCCCTTTGGAAGTGGGTTTTTCAGAGT
 
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JMFS027F10+           CCATTTTCCCGGAGCTGTAAACGGAAGAAATTAAAAGCTCAGTGCAAAAGGAGAAACTAT
JMFS147H03+           CCATTTTCCCGGAGCTGTAAACGGAAGAAATTAAAAGCTCAGTGCAAAAGGAGAAACTAT
JMSF003H06+                                               GCTCAGTGCAAAAGGAGAAACTAT
                      ____________________________________________________________
consensus             CCATTTTCCCGGAGCTGTAAACGGAAGAAATTAAAAGCTCAGTGCAAAAGGAGAAACTAT
 
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JMFS027F10+           GCCAGATCCATGGAGTTTCGCCTTGTAGCAGCGCTCAAATAAGGAGGAGAAGCCCAGAAA
JMFS147H03+           GCCAGATCCATGGAGTTTCGCCTTGTAGCAGCGCTCAAATAAGGAGGAGAAGCCCAGAAA
JMSF003H06+           GCCAGATCCATGGAGTTTCGCCTTGTAGCAGCGCTCAAATAAGGAGGAGAAGCCCAGAAA
                      ____________________________________________________________
consensus             GCCAGATCCATGGAGTTTCGCCTTGTAGCAGCGCTCAAATAAGGAGGAGAAGCCCAGAAA
 
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JMFS027F10+           AACAGAAAAAAACGGCGATGGATTTGACT-AAAATCCTCTTGACTTTACGAAAGTAGTAC
JMFS147H03+           AACAGAAAAAAACGGCGATGGATTTGACTAAAAATCCTCTTGACTTTACGAAAGTAGTAC
JMSF003H06+           AACAGAAAAAAACGGCGATGGATTTGACTAAAAATCCTCTTGACTTTACGAAAGTAGTAC
                      ____________________________________________________________
consensus             AACAGAAAAAAACGGCGATGGATTTGACTAAAAATCCTCTTGACTTTACGAAAGTAGTAC
 
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JMFS027F10+           AAGATAGCAGAAGAGGTCGTCTGCAATGATTATAGCGGTTGAAAAATCACGCCAAGAAGA
JMFS147H03+           AAGATAGCAGAAGAGGTCGTCTGCAATGATTATAGCGGTTGAAAAATCACGCCAAGAAGA
JMSF003H06+           AAGATAGCAGAAGAGGTCGTCTGCAATGATTATAGCGGTTGAAAAATCACGCCAAGAAGA
                      ____________________________________________________________
consensus             AAGATAGCAGAAGAGGTCGTCTGCAATGATTATAGCGGTTGAAAAATCACGCCAAGAAGA
 
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JMFS027F10+           CGAGAACAGAGAAAAACGGAGTGAAAAAAGAAAGCAATGATGAAATAAGAAGGTTTTTCT
JMFS147H03+           CGAGAACAGAGAAAAACGGAGTGAAAAAAGAAAGCAATGATGAAATAAGAAGGTTTTTCT
JMSF003H06+           CGAGAACAGAGAAAAACGGAGTGAAAAAAGAAAGCAATGATGAAATAAGAAGGTTTTTCT
                      ____________________________________________________________
consensus             CGAGAACAGAGAAAAACGGAGTGAAAAAAGAAAGCAATGATGAAATAAGAAGGTTTTTCT
 
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JMFS027F10+           TTTCCCTTCCCTTCTTTTGCCCCTCTCTCTCTCTTTCT                      
JMFS147H03+           TTTCCCTTCCCTTCTTTTGCCCCTCTCTCTCTCTTTCTTTCTTTATTTCTTTCTCTCACT
JMSF003H06+           TTTCCCTTCCCTTCTTTTGCCCCTCTCTCTCTCTTTCTTTCTTTATTTCTTTCTCTCACT
                      ____________________________________________________________
consensus             TTTCCCTTCCCTTCTTTTGCCCCTCTCTCTCTCTTTCTTTCTTTATTTCTTTCTCTCACT
 
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JMFS147H03+           GTGCAGCGCTGTGTG                                             
JMSF003H06+           GTGCAGCGCTGTGTGGGGGCGGAGTTTCAAGAAGAGGAGAGAGAAAGAGTGGAGGGTTCC
                      ____________________________________________________________
consensus             GTGCAGCGCTGTGTGGGGGCGGAGTTTCAAGAAGAGGAGAGAGAAAGAGTGGAGGGTTCC