Contig 006345:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF002B22Sequence325006345 (3)738011232 (3)ref|XP_006366239.1|296PREDICTED: uncharacterized protein LOC102599907 [Solanum tuberosum]
JMSF036O06Sequence641006345 (3)ref|XP_009616003.1|209PREDICTED: uncharacterized protein LOC104108627 [Nicotiana tomentosiformis]676011232 (3)ref|XP_006366239.1|255PREDICTED: uncharacterized protein LOC102599907 [Solanum tuberosum]
JMSF039G19Sequence622006345 (3)ref|XP_009616003.1|204PREDICTED: uncharacterized protein LOC104108627 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMSF039G19+                                             CTCGAGCATGAGGCGATAGCTTCACA
JMSF036O06+                                     TCTAATGGCTCGAGCATGAGGCGATAGCTTCACA
                      ____________________________________________________________
consensus                                       TCTAATGGCTCGAGCATGAGGCGATAGCTTCACA
 
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JMSF039G19+           ACTTCATCATCTAGTATAAATAGAAGGGCCATGATTGGAGGGGCCGCGTATCCCAACCCT
JMSF036O06+           ACTTCATCATCTAGTATAAATAGAAGGGCCATGATTGGAGGGGCCGCGTATCCCAACCCT
                      ____________________________________________________________
consensus             ACTTCATCATCTAGTATAAATAGAAGGGCCATGATTGGAGGGGCCGCGTATCCCAACCCT
 
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JMSF039G19+           TCAACAATGGCATCTAACGTTGGCGTGAACCCTCCCGTACTATCTATTCCCGTCATCGAA
JMSF036O06+           TCAACAATGGCATCTAACGTTGGCGTGAACCCTCCCGTACTATCTATTCCCGTCATCGAA
                      ____________________________________________________________
consensus             TCAACAATGGCATCTAACGTTGGCGTGAACCCTCCCGTACTATCTATTCCCGTCATCGAA
 
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JMSF039G19+           CATATAAACCTTCCAGCTAAAGCCATTGCACCATATATTCCGATTCCGTAGCTGAGACGC
JMSF036O06+           CATATAAACCTTCCAGCTAAAGCCATTGCACCATATATTCCGATTCCGTAGCTGAGACGC
                      ____________________________________________________________
consensus             CATATAAACCTTCCAGCTAAAGCCATTGCACCATATATTCCGATTCCGTAGCTGAGACGC
 
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JMSF039G19+           ACGATTGCACCGATCTTGTCCCAGACGGGAAGTTCGGCTTCGCGGAAAGTCTGGTTGAGC
JMSF036O06+           ACGATTGCACCGATCTTGTCCCAGACGGGAAGTTCGGCTTCGCGGAAAGTCTGGTTGAGC
                      ____________________________________________________________
consensus             ACGATTGCACCGATCTTGTCCCAGACGGGAAGTTCGGCTTCGCGGAAAGTCTGGTTGAGC
 
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JMSF039G19+           GTGGTGACCTCCATGGTGGGTCCGGCGAACGTCCCCGCAGCTCCGGCATCTCTCTCCGCT
JMSF036O06+           GTGGTGACCTCCATGGTGGGTCCGGCGAACGTCCCCGCAGCTCCGGCATCTCTCTCCGCT
                      ____________________________________________________________
consensus             GTGGTGACCTCCATGGTGGGTCCGGCGAACGTCCCCGCAGCTCCGGCATCTCTCTCCGCT
 
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JMSF039G19+           GCTCCGCCTTCCACGGCGTCGCCGCCGGTTCTCTCCGCCGTCGCCTTGACTCTAACGACC
JMSF036O06+           GCTCCGCCTTCCACGGCGTCGCCGCCGGTTCTCTCCGCCGTCGCCTTGACTCTAACGACC
JMSF002B22+                                              CGCCGTCGCCTTGACTCTAACGACC
                      ____________________________________________________________
consensus             GCTCCGCCTTCCACGGCGTCGCCGCCGGTTCTCTCCGCCGTCGCCTTGACTCTAACGACC
 
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JMSF039G19+           GCAATACCCGCCGTGGTGTTTTTCTTCTTCTTCTTGATGAAATTGACCGGGAATTCGTGA
JMSF036O06+           GCAATACCCGCCGTGGTGTTTTTCTTCTTCTTCTTGATGAAATTGACCGGGAATTCGTGA
JMSF002B22+           GCAATACCCGCCGTGGTGTTTTTCTTCTTCTTCTTGATGAAATTGACCGGGAATTCGTGA
                      ____________________________________________________________
consensus             GCAATACCCGCCGTGGTGTTTTTCTTCTTCTTCTTGATGAAATTGACCGGGAATTCGTGA
 
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JMSF039G19+           AAGTTTCCGGCTTTGAAGAACGCGAGAGGGGGATTCGGAGCCCGGAATATCATCGGAAGC
JMSF036O06+           AAGTTTCCGGCTTTGAAGAACGCGAGAGGGGGATTCGGAGCCCGGAATATCATCGGAAGC
JMSF002B22+           AAGTTTCCGGCTTTGAAGAACGCGAGAGGGGGATTCGGAGCCCGGAATATCATCGGAAGC
                      ____________________________________________________________
consensus             AAGTTTCCGGCTTTGAAGAACGCGAGAGGGGGATTCGGAGCCCGGAATATCATCGGAAGC
 
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JMSF039G19+           TCCATTTTTTTCGAGTGAGGTCCGGTCGGAGGTGTTTTACGGCCGGCGAGCTAATGTCGG
JMSF036O06+           TCCATTTTTTTCGAGTGAGGTCCGGTCGGAGGTGTTTTACGGCCGGCGAGCTAATGTCGG
JMSF002B22+           TCCATTTTTTTCGAGTGAGGTCCGGTCGGAGGTGTTTTACGGCCGGCGAGCTAATGTCGG
                      ____________________________________________________________
consensus             TCCATTTTTTTCGAGTGAGGTCCGGTCGGAGGTGTTTTACGGCCGGCGAGCTAATGTCGG
 
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JMSF039G19+           GACTTTAACCTGCCGTTGATTCCCGTCCGGCTTCTTCTAAGCATGCTGTAATCC      
JMSF036O06+           GACTTTAACCTGCCGTTGATTCCCGTCCGGCTTCTTCTAAGCATGCTGTAATCCAGTCTC
JMSF002B22+           GACTTTAACCTGCCGTTGATTCCCGTCCGGCTTCTTCTAAGCATGCTGTAATCCAGTCTC
                      ____________________________________________________________
consensus             GACTTTAACCTGCCGTTGATTCCCGTCCGGCTTCTTCTAAGCATGCTGTAATCCAGTCTC
 
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JMSF036O06+           GCAAGC                                                      
JMSF002B22+           GCAAGCAAGAAGAAGAGATTTATATATAAATATATATAATATGATATGATATTGGCCGCC
                      ____________________________________________________________
consensus             GCAAGCAAGAAGAAGAGATTTATATATAAATATATATAATATGATATGATATTGGCCGCC