Contig 006311:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF031K16+                                                                    GNT
                      ____________________________________________________________
consensus                                                                      GNT
 
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JMSF031K16+           CATCTGTGNGANTATCCTGCACCACAGGCTGGCATNTGATAGTCCCATCTGGCTTGTCTA
                      ____________________________________________________________
consensus             CATCTGTGNGANTATCCTGCACCACAGGCTGGCATNTGATAGTCCCATCTGGCTTGTCTA
 
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JMSF031K16+           TGNGATTATCCTGGGCCACTGGCAGGCATCCTAGACTTCCATCTGGTTTGTTATCCTGCA
                      ____________________________________________________________
consensus             TGNGATTATCCTGGGCCACTGGCAGGCATCCTAGACTTCCATCTGGTTTGTTATCCTGCA
 
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JMSF031K16+           CCATTGGCTGGCATCCAAGACTTCCATCAGGGTCATCTATGTGATTGTCCACAGCATCAG
                      ____________________________________________________________
consensus             CCATTGGCTGGCATCCAAGACTTCCATCAGGGTCATCTATGTGATTGTCCACAGCATCAG
 
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JMSF031K16+           GCTCATCTATGTGATTGTCCACAACATCGAGCTGGCATCGTATGCTTCCATCCTGCTTCT
                      ____________________________________________________________
consensus             GCTCATCTATGTGATTGTCCACAACATCGAGCTGGCATCGTATGCTTCCATCCTGCTTCT
 
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JMSF031K16+           CTATGTAATTCCCCTGAACCACGGGCTGGCATCCAATGCTTCCATCAGGCTCATCTACAT
                      ____________________________________________________________
consensus             CTATGTAATTCCCCTGAACCACGGGCTGGCATCCAATGCTTCCATCAGGCTCATCTACAT
 
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JMSF031K16+           GATTCTCCTGAACCAAGGGCTGACATCCGATATTCCCATTGGGCTCCTCTATGTGATTCT
                      ____________________________________________________________
consensus             GATTCTCCTGAACCAAGGGCTGACATCCGATATTCCCATTGGGCTCCTCTATGTGATTCT
 
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JMSF031K16+           CCTGAGTCACAGGCTGGCATCTGATACTTCTATCCGGCTCGTCTATGTGATTATCTTGCA
JMFS092C11+                                                                   TGCA
                      ____________________________________________________________
consensus             CCTGAGTCACAGGCTGGCATCTGATACTTCTATCCGGCTCGTCTATGTGATTATCTTGCA
 
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JMSF031K16+           CCATTGGCTGGCACCCGTCGCTGCCATCTGGCTACACCAGGGGTCCACTTCCACCATCCT
JMFS092C11+           CCATTGGCTGGCACCCGTCGCTGCCATCTGGCTCCACCAGGGGTCCACTTCCACCATCCT
                      ____________________________________________________________
consensus             CCATTGGCTGGCACCCGTCGCTGCCATCTGGCTCCACCAGGGGTCCACTTCCACCATCCT
 
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JMSF031K16+           GTACTTCCTCGCCATGGGAGGCTACCACTTGCTCATCGCCGGCGCTTACATCCCGATTAG
JMFF051L22+                                                  CGGCGCTTACATCCCGATTAG
JMFS092C11+           GTACTTCCTCGCCATGGGAGGCTACCACTTGCTCATCGCCGGCGCTTACATCCCGATTAG
JMFS161H02+                                CTACCACTTGCTCATCGCCGGCGCTTACATCCCGATTAG
                      ____________________________________________________________
consensus             GTACTTCCTCGCCATGGGAGGCTACCACTTGCTCATCGCCGGCGCTTACATCCCGATTAG
 
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JMSF031K16+           AAATCCGATTCAAAGAATCATGCGGTTCCGAAATCGCCTGGTCCTGATGCCGCGCATCCG
JMFF051L22+           AAATCCGATTCAAAGAATCATGCGGTTCCGAAATCGCCTGGTCCTGATGCCGCGCATCCG
JMFS092C11+           AAATCCGATTCAAAGAATCATGCGGTTCCGAAATCGCCTGGTCCTGATGCCGCGCATCCG
JMFS161H02+           AAATCCGATTCAAAGAATCATGCGGTTCCGAAATCGCCTGGTCCTGATGCCGCGCATCCG
                      ____________________________________________________________
consensus             AAATCCGATTCAAAGAATCATGCGGTTCCGAAATCGCCTGGTCCTGATGCCGCGCATCCG
 
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JMSF031K16+           GTTGTTCTTTTTCTTGCTCCGCTAATTTTGGTTCCTCGAATTCTAGGGTTTGCAGATTCG
JMFF051L22+           GTTGTTCTTTTTCTTGCTCCGCTAATTTTGGTTCCTCGAATTCTAGGGTTTGCAGATTCG
JMFS092C11+           GTTGTTCTTTTTCTTGCTCCGCTAATTTTGGTTCCTCGAATTCTAGGGTTTGCAGATTCG
JMFS161H02+           GTTGTTCTTTTTCTTGCTCCGCTAATTTTGGTTCCTCGAATTCTAGGGTTTGCAGATTCG
JMFS140A04+                                                                 GATTCG
                      ____________________________________________________________
consensus             GTTGTTCTTTTTCTTGCTCCGCTAATTTTGGTTCCTCGAATTCTAGGGTTTGCAGATTCG
 
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JMSF031K16+           GTCCTTGAACATCAATATTCTCCTTCTGGATTTCTTCGTTGGAGTTAGTGGCCTGTGGTG
JMFF051L22+           GTCCTTGAACATCAATATTCTCCTTCTGGATTTCTTCGTTGGAGTTAGTGGCCTGTGGTG
JMFS092C11+           GTCCTTGAACATCAATATTCTCCTTCTGGATTTCTTCGTTGGAGTTAGTGGCCTGTGGTG
JMFS161H02+           GTCCTTGAACATCAATATTCTCCTTCTGGATTTCTTCGTTGGAGTTAGTGGCCTGTGGTG
JMFS140A04+           GTCCTTGAACATCAATATTCTCCTTCTGGATTTCTTCGTTGGAGTTAGTGGCCTGTGGTG
                      ____________________________________________________________
consensus             GTCCTTGAACATCAATATTCTCCTTCTGGATTTCTTCGTTGGAGTTAGTGGCCTGTGGTG
 
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JMSF031K16+           TCGCT                                                       
JMFF051L22+           TCGCTGTAGTGGCGGTAGCGGTGGCGGTGTTTGTAGCTCTGTTGTCGTTGTCAGAGATAA
JMFS092C11+           TCGCTGTAGTGGCGGTAGCGGTGGCGGTGTTTGTAGCTCTGTTGTCGTTGTCAGAGATAA
JMFS161H02+           TCGCTGTAGTGGCGGTAGCGGTGGCGGTGTTTGTAGCTCTGTTGTCGTTGTCAGAGATAA
JMFS140A04+           TCGCTGTAGTGGCGGTAGCGGTGGCGGTGTTTGTAGCTCTGTTGTCGTTGTCAGAGATAA
                      ____________________________________________________________
consensus             TCGCTGTAGTGGCGGTAGCGGTGGCGGTGTTTGTAGCTCTGTTGTCGTTGTCAGAGATAA
 
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JMFF051L22+           GAGCGGCCTTCCTTTTCCCCTTTCTGGTATAGACCTTGCTAGCGTCGCCCCACCGCAACC
JMFS092C11+           GAGCGGCCTTCCTTTTCCCCTTTCTGGTATAGACCTTGCTAGCGTCGCCCCACCGCAACC
JMFS161H02+           GAGCGGCCTTCCTTTTCCCCTTTCTGGTATAGACCTTGCTAGCGTCGCCCCACCGCAACC
JMFS140A04+           GAGCGGCCTTCCTTTTCCCCTTTCTGGTATAGACCTTGCTAGCGTCGCCCCACCGCAACC
                      ____________________________________________________________
consensus             GAGCGGCCTTCCTTTTCCCCTTTCTGGTATAGACCTTGCTAGCGTCGCCCCACCGCAACC
 
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JMFF051L22+           TCTCTCTCGAATTCAAATCATTTGTACCCGAATCCATACATGAAACCGGACCCCGA    
JMFS092C11+           TCTCTCTCGAATTCAAATCATTTGTACCCGAATCCATACATGAAACCGGACCCCGACAAA
JMFS161H02+           TCTCTCTCGAATTCAAATCATTTGTACCCGAATCCATACATGAAACCGGACCCCGACAAA
JMFS140A04+           TCTCTCTCGAATTCAAATCATTTGTACCCGAATCCATACATGAAACCGGACCCCGACAAA
                      ____________________________________________________________
consensus             TCTCTCTCGAATTCAAATCATTTGTACCCGAATCCATACATGAAACCGGACCCCGACAAA
 
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JMFS092C11+           AACCAACAACGAAGCCTGACAAACGAAACCCTAAACACCAATCTCAGAAGGATCGAACCT
JMFS161H02+           AACCAACAACGAAGCCTGACAAACGAAACCCTAAACACCAATCTCAGAAGGATCGAACCT
JMFS140A04+           AACCAACAACGAAGCCTGACAAACGAAACCCTAAACACCAATCTCAGAAGGATCGAACCT
                      ____________________________________________________________
consensus             AACCAACAACGAAGCCTGACAAACGAAACCCTAAACACCAATCTCAGAAGGATCGAACCT
 
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JMFS092C11+           CAACCAAAAAGAAATGAGGGTAAAACAAAACTAGGGTTCGAAGAACCACCGAT       
JMFS161H02+           CAACCAAAAAGAAATGAGGGTAAAACAAAACTAGGGTTCGAAGAACCACCGATGCGCAAC
JMFS140A04+           CAACCAAAAAGAAATGAGGGTAAAACAAAACTAGGGTTCGAAGAACCACCGATGCGCAAC
                      ____________________________________________________________
consensus             CAACCAAAAAGAAATGAGGGTAAAACAAAACTAGGGTTCGAAGAACCACCGATGCGCAAC
 
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JMFS161H02+           CCGAATCGAAAACCCTAACCCGGTTGACTCGAAAAAAGCTCCGATTTTCAGAACGATACA
JMFS140A04+           CCGAATCGAAAACCCTAACCCGGTTGACTCGAAAAAAGCTCCGATTTTCAGAACGATACA
                      ____________________________________________________________
consensus             CCGAATCGAAAACCCTAACCCGGTTGACTCGAAAAAAGCTCCGATTTTCAGAACGATACA
 
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JMFS161H02+           GGAATCGAATTCG                                               
JMFS140A04+           GGAATCGAATTCGTACGGAAGCTCGCTAGGGTTTTTCGATAGTGAAAAAGGAGAAAACGG
                      ____________________________________________________________
consensus             GGAATCGAATTCGTACGGAAGCTCGCTAGGGTTTTTCGATAGTGAAAAAGGAGAAAACGG
 
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JMFS140A04+           AAATTACAGAAAAGTTGAAGGATCTGTACGGTAAAAAATTTAGAAAAAAAAAAATATTTC
                      ____________________________________________________________
consensus             AAATTACAGAAAAGTTGAAGGATCTGTACGGTAAAAAATTTAGAAAAAAAAAAATATTTC
 
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JMFS140A04+           CTATTTTAAAAAAATATATTTTTCGTAAAGACTAAAGAGGGGGAAAGATTTTTAGGGTTT
                      ____________________________________________________________
consensus             CTATTTTAAAAAAATATATTTTTCGTAAAGACTAAAGAGGGGGAAAGATTTTTAGGGTTT