Contig 006290:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN039L21Sequence595006290 (2)ref|XP_006354610.1|3e-96PREDICTED: nitrate transporter 1.5-like [Solanum tuberosum]
JMFS116H08Sequence561006290 (2)ref|XP_006354610.1|1e-45PREDICTED: nitrate transporter 1.5-like [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN039L21+ GCGCCGAACGTCGCCACGTTGGGCTGG
                      ____________________________________________________________
consensus GCGCCGAACGTCGCCACGTTGGGCTGG
 
. : . : . : . : . : . :
JMFN039L21+ TAGCCGCCGTTCCCCAGCGCCACTAGGTAGATCGACACGTAGAACAGCACGACATGGAGC
                      ____________________________________________________________
consensus TAGCCGCCGTTCCCCAGCGCCACTAGGTAGATCGACACGTAGAACAGCACGACATGGAGC
 
. : . : . : . : . : . :
JMFN039L21+ GTCGAGTGGTCGCCGCATTTGCTGTTCTTGTCGCCGCAGCCCTTTGGTCGGACTAGGAAA
                      ____________________________________________________________
consensus GTCGAGTGGTCGCCGCATTTGCTGTTCTTGTCGCCGCAGCCCTTTGGTCGGACTAGGAAA
 
. : . : . : . : . : . :
JMFN039L21+ ATTTGTGAACATATGGAGAGTGACACTAACCCAATGACATAAATGCCCTGGAAGATGGCA
                      ____________________________________________________________
consensus ATTTGTGAACATATGGAGAGTGACACTAACCCAATGACATAAATGCCCTGGAAGATGGCA
 
. : . : . : . : . : . :
JMFN039L21+ CAAGTTTTGTATCTCCCCCAATAGGAATCACTAAGGAAGGCTCCAAGAAGGGAGAAGATA
JMFS116H08+ GCTCCAAGAAGGGAGAAGATA
                      ____________________________________________________________
consensus CAAGTTTTGTATCTCCCCCAATAGGAATCACTAAGGAAGGCTCCAAGAAGGGAGAAGATA
 
. : . : . : . : . : . :
JMFN039L21+ TAAACAGTGCCAGTCCATTTGCTAACGTTGTTAGCCGCCTCAGCGTTGTCTTGCCCCATC
JMFS116H08+ TATACAGTGCCAGTCCATTTGCTAACGTTGTTAGCCGCCTCAGCGTTGTCTTGCCCCATC
                      ____________________________________________________________
consensus TATACAGTGCCAGTCCATTTGCTAACGTTGTTAGCCGCCTCAGCGTTGTCTTGCCCCATC
 
. : . : . : . : . : . :
JMFN039L21+ ACTCTTGTTAGGAACAATACCAGATTTACCCCCACACCAAAAAATGCCAGCGTAGCTAAT
JMFS116H08+ ACTCTTGTTAGGAACAATACCAGATTTACCCCCACACCAAAAAATGCCAGCGTAGCTAAT
                      ____________________________________________________________
consensus ACTCTTGTTAGGAACAATACCAGATTTACCCCCACACCAAAAAATGCCAGCGTAGCTAAT
 
. : . : . : . : . : . :
JMFN039L21+ CCTTGGTTCACTAGCAAAAGCACGCCGGAAACCCATCCTCCGGTGGTTGCTCGGACAGCC
JMFS116H08+ CCTTGGTTCACTAGCAAAAGCACGCCGGAAACCCATCCTCCGGTGGTTGCTCGGACAGCC
                      ____________________________________________________________
consensus CCTTGGTTCACTAGCAAAAGCACGCCGGAAACCCATCCTCCGGTGGTTGCTCGGACAGCC
 
. : . : . : . : . : . :
JMFN039L21+ GGTCGGCCGTGCTTATCAATACTTCCGTCAAGGGTGCACTCCCCTCGCCCAACGTTCTCC
JMFS116H08+ GGTCGGCCGTGCTTATCAATACTTCCGTCAAGGGTGCACTCCCCTCGCCCAACGTTCTCC
                      ____________________________________________________________
consensus GGTCGGCCGTGCTTATCAATACTTCCGTCAAGGGTGCACTCCCCTCGCCCAACGTTCTCC
 
. : . : . : . : . : . :
JMFN039L21+ TCCCGTGGATCCATTTTGGAGATGTTTAAGCAAGCCATTGTTGCTAGAGCTTCAATTCCT
JMFS116H08+ TCCCGTGGATCCATTTTGGAGATGTTTAAGCAAGCCATTGTTGCTAGAGCTTCAATTCCT
                      ____________________________________________________________
consensus TCCCGTGGATCCATTTTGGAGATGTTTAAGCAAGCCATTGTTGCTAGAGCTTCAATTCCT
 
. : . : . : . : . : . :
JMFN039L21+ CCAATTAATCAAGAAAACTGGAATGGAT
JMFS116H08+ CCAATTAATCAAGAAAACTGGAATGGATGGCTTGCGATGTTGAGAGATGAACAGAGGGAC
                      ____________________________________________________________
consensus CCAATTAATCAAGAAAACTGGAATGGATGGCTTGCGATGTTGAGAGATGAACAGAGGGAC
 
. : . : . : . : . : . :
JMFS116H08+ GGACGGACGGACGGACAGGATATTGTTGCAGAGAGAATGGACGGATGAGATTGGGCCGGG
                      ____________________________________________________________
consensus GGACGGACGGACGGACAGGATATTGTTGCAGAGAGAATGGACGGATGAGATTGGGCCGGG
 
. : . : . : . : . : . :
JMFS116H08+ GAGAATTATATAGCAGTGGAGATGGAAGAGGGAGAGAGAAGTGTGTATATATATATATAT
                      ____________________________________________________________
consensus GAGAATTATATAGCAGTGGAGATGGAAGAGGGAGAGAGAAGTGTGTATATATATATATAT
 
. : . : . : . : . : . :
JMFS116H08+ ATATATATATATATATATATATATATATATATATATATATATATATGAAGTTGGAATTGT
                      ____________________________________________________________
consensus ATATATATATATATATATATATATATATATATATATATATATATATGAAGTTGGAATTGT