Contig 006289:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF015J11Sequence268006289 (8)554011770 (6)
JMFF033O10Sequence224006289 (8)698011770 (6)ref|XP_009604807.1|2e-05PREDICTED: TPR repeat-containing thioredoxin TTL1 [Nicotiana tomentosiformis]
JMFS003A03Sequence569006289 (8)ref|XP_006348295.1|6e-20PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Solanum tuberosum]
JMFS042C03Sequence620006289 (8)ref|XP_006348295.1|2e-15PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Solanum tuberosum]
JMFS070G03Sequence617006289 (8)ref|XP_002276519.2|2e-09PREDICTED: inactive TPR repeat-containing thioredoxin TTL3 [Vitis vinifera]
JMFS115G09Sequence633006289 (8)ref|XP_002276519.2|4e-09PREDICTED: inactive TPR repeat-containing thioredoxin TTL3 [Vitis vinifera]
JMFS143H03Sequence614006289 (8)ref|XP_006348295.1|5e-11PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Solanum tuberosum]
JMSF024D23Sequence583006289 (8)ref|XP_002276519.2|2e-08PREDICTED: inactive TPR repeat-containing thioredoxin TTL3 [Vitis vinifera]783011770 (6)ref|XP_011082756.1|5e-20PREDICTED: TPR repeat-containing thioredoxin TTL1-like [Sesamum indicum]

Alignment

This contig is upended


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JMFS003A03+                 TATTCAACGGCGGGGAGTTGACGGAGCACCCGCCGGAGTATATTAGAGAGGGGG
                      ____________________________________________________________
consensus                   TATTCAACGGCGGGGAGTTGACGGAGCACCCGCCGGAGTATATTAGAGAGGGGG
 
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JMFS003A03+           CACCAGCCGAGTGAGAGCGCGCGTGACGCGGCTTAAACCTGCGCGTCCCCGGTGAACTCT
JMFS042C03+              CAGCCGAGTGAGAGCGCGCGTGACGCGGCTTAAACCTGCGCGTCCCCGGTGAACTCT
JMFS143H03+                                            TAAACCTGCGCGTCCCCGGTGAACTCT
                      ____________________________________________________________
consensus             CACCAGCCGAGTGAGAGCGCGCGTGACGCGGCTTAAACCTGCGCGTCCCCGGTGAACTCT
 
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JMFS003A03+           CCGCCGAGCCCGAAAGCTCACCGGAGTTGTTACAATCGGACTTCTTCGACACCAAGCTCG
JMFS042C03+           CCGCCGAGCCCGAAAGCTCACCGGAGTTGTTACAATCGGACTTCTTCGACACCAAGCTCG
JMFS143H03+           CCGCCGAGCCCGAAAGCTCACCGGAGTTGTTACAATCGGACTTCTTCGACACCAAGCTCG
JMFS070G03+             GCCGAGCCCGAAAGCTCACCGGAGTTGTTACAATCGGACTTCTTCGACACCAAGCTCG
JMSF024D23+                                                        TCGACACCAAGCTCG
JMFS115G09+                                      TGTTACAATCGGACTTCTTCGACACCAAGCTCG
                      ____________________________________________________________
consensus             CCGCCGAGCCCGAAAGCTCACCGGAGTTGTTACAATCGGACTTCTTCGACACCAAGCTCG
 
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JMFS003A03+           GCCCGGCCCGGCCCGACACCGATCCGGACGAGCTAGAGCTACTACTAGTAGTAGTTGTTG
JMFS042C03+           GCCCGGCCCGGCCCGACACCGATCCGGACGAGCTAGAGCTACTACTAGTAGTAGTTGTTG
JMFS143H03+           GCCCGGCCCGGCCCGACACCGATCCGGACGAGCTAGAGCTACTACTAGTAGTAGTTGTTG
JMFS070G03+           GCCCGGCCCGGCCCGACACCGATCCGGACGAGCTAGAGCTACTACTAGTAGTAGTTGTTG
JMSF024D23+           GCCCGGCCCGGCCCGACACCGATCCGGACGAGCTAGAGCTACTACTAGTAGTAGTTGTTG
JMFS115G09+           GCCCGGCCCGGCCCGACACCGATCCGGACGAGCTAGAGCTACTACTAGTAGTAGTTGTTG
                      ____________________________________________________________
consensus             GCCCGGCCCGGCCCGACACCGATCCGGACGAGCTAGAGCTACTACTAGTAGTAGTTGTTG
 
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JMFS003A03+           TTGTAGTGGTAGTAGCAGTAGTCGCCGCAGAGCCCCCATTCCGGCGAGCCGGCAGCGGCG
JMFS042C03+           TTGTAGTGGTAGTAGCAGTAGTCGCCGCAGAGCCCCCATTCCGGCGAGCCGGCAGCGGCG
JMFS143H03+           TTGTAGTGGTAGTAGCAGTAGTCGCCGCAGAGCCCCCATTCCGGCGAGCCGGCAGCGGCG
JMFS070G03+           TTGTAGTGGTAGTAGCAGTAGTCGCCGCAGAGCCCCCATTCCGGCGAGCCGGCAGCGGCG
JMSF024D23+           TTGTAGTGGTAGTAGCAGTAGTCGCCGCAGAGCCCCCATTCCGGCGAGCCGGCAGCGGCG
JMFS115G09+           TTGTAGTGGTAGTAGCAGTAGTCGCCGCAGAGCCCCCATTCCGGCGAGCCGGCAGCGGCG
                      ____________________________________________________________
consensus             TTGTAGTGGTAGTAGCAGTAGTCGCCGCAGAGCCCCCATTCCGGCGAGCCGGCAGCGGCG
 
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JMFS003A03+           AAACGGGCGAGCCCAGATCGAGCTCCCGGAAATCGGGCTTGTTAACTTCCGACCCAAATG
JMFS042C03+           AAACGGGCGAGCCCAGATCGAGCTCCCGGAAATCGGGCTTGTTAACTTCCGACCCAAATG
JMFS143H03+           AAACGGGCGAGCCCAGATCGAGCTCCCGGAAATCGGGCTTGTTAACTTCCGACCCAAATG
JMFS070G03+           AAACGGGCGAGCCCAGATCGAGCTCCCGGAAATCGGGCTTGTTAACTTCCGACCCAAATG
JMSF024D23+           AAACGGGCGAGCCCAGATCGAGCTCCCGGAAATCGGGCTTGTTAACTTCCGACCCAAATG
JMFS115G09+           AAACGGGCGAGCCCAGATCGAGCTCCCGGAAATCGGGCTTGTTAACTTCCGACCCAAATG
                      ____________________________________________________________
consensus             AAACGGGCGAGCCCAGATCGAGCTCCCGGAAATCGGGCTTGTTAACTTCCGACCCAAATG
 
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JMFS003A03+           AGCTCCTCAACCTATCGCTCAAACCGTCAATCCCAATCTCCGACACCGACCCTCTCCGAG
JMFS042C03+           AGCTCCTCAACCTATCGCTCAAACCGTCAATCCCAATCTCCGACACCGACCCTCTCCGAG
JMFS143H03+           AGCTCCTCAACCTATCGCTCAAACCGTCAATCCCAATCTCCGACACCGACCCTCTCCGAG
JMFS070G03+           AGCTCCTCAACCTATCGCTCAAACCGTCAATCCCAATCTCCGACACCGACCCTCTCCGAG
JMSF024D23+           AGCTCCTCAACCTATCGCTCAAACCGTCAATCCCAATNTCCGACACCGACCCTNTCCGAG
JMFS115G09+           AGCTCCTCAACCTATCGCTCAAACCGTCAATCCCAATCTCCGACACCGACCCTCTCCGAG
                      ____________________________________________________________
consensus             AGCTCCTCAACCTATCGCTCAAACCGTCAATCCCAATCTCCGACACCGACCCTCTCCGAG
 
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JMFS003A03+           AATGCGGCATTTCAAACCCACCCTTCCCTCCGGCAAACAAATATAAATATATATACACAA
JMFS042C03+           AATGCGGCATTTCAAACCCACCCTTCCCTCCGGCAAACAAATATAAATATATATACACAA
JMFS143H03+           AATGCGGCATTTCAAACCCACCCTTCCCTCCGGCAAACAAATATAAATATATATACACAA
JMFS070G03+           AATGCGGCATTTCAAACCCACCCTTCCCTCCGGCAAACAAATATAAATATATATACACAA
JMSF024D23+           AATGCGGCATTTCAAACCCACCCTTCCCTCCGGCAAACAAATATAAATATATATACNCAA
JMFS115G09+           AATGCGGCATTTCAAACCCACCCTTCCCTCCGGCAAACAAATATAAATATATATACACAA
                      ____________________________________________________________
consensus             AATGCGGCATTTCAAACCCACCCTTCCCTCCGGCAAACAAATATAAATATATATACACAA
 
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JMFS003A03+           ACTATAAGTGTTTCCTCCTCGCTTAGCACTGAGAGTCAGCAGCAATGTCTGGAGAAAGCA
JMFS042C03+           ACTATAAGTGTTTCCTCCTCGCTTAGCACTGAGAGTCAGCAGCAATGTCTGGAGAAAGCA
JMFS143H03+           ACTATAAGTGTTTCCTCCTCGCTTAGCACTGAGAGTCAGCAGCAATGTCTGGAGAAAGCA
JMFS070G03+           ACTATAAGTGTTTCCTCCTCGCTTAGCACTGAGAGTCAGCAGCAATGTCTGGAGAAAGCA
JMSF024D23+           ACTATAAGTGTTTCCTCCTCGCTTAGCACTGAGAGTCAGCAGCAATGTCTGGAGAAAGCA
JMFF015J11+             TATAAGTGTTTCCTCCTCGCTTAGCNCTGAGAGTCAGCAGCAATGTNTGGAGAAAGCA
JMFF033O10+                                                            TGGAGAAAGCA
JMFS115G09+           ACTATAAGTGTTTCCTCCTCGCTTAGCACTGAGAGTCAGCAGCAATGTCTGGAGAAAGCA
                      ____________________________________________________________
consensus             ACTATAAGTGTTTCCTCCTCGCTTAGCACTGAGAGTCAGCAGCAATGTCTGGAGAAAGCA
 
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JMFS003A03+           GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGA                         
JMFS042C03+           GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGACATGAGAAAAGGAGAAAGAAAAACA
JMFS143H03+           GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGACATGAGAAAAGGAGAAAGAAAAACA
JMFS070G03+           GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGACATGAGAAAAGGAGAAAGAAAAACA
JMSF024D23+           GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGACATGAGAAAAGGAGAAAGAAAAACA
JMFF015J11+           GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGACATGAGAAAAGGAGAAAGAAAAACA
JMFF033O10+           GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGACATGAGAAAAGGAGAAAGAAAAACA
JMFS115G09+           GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGACATGAGAAAAGGAGAAAGAAAAACA
                      ____________________________________________________________
consensus             GGTGAAAGAATGGAGAAGGGAGGCATTGAAGAAGACATGAGAAAAGGAGAAAGAAAAACA
 
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JMFS042C03+           GAGATAGATAGGGATCTCGTGATATAAAAAAGGCAGAAGCAAAGAATGAATGCGATATTG
JMFS143H03+           GAGATAGATAGGGATCTCGTGATATAAAAAAGGCAGAAGCAAAGAATGAATGCGATATTG
JMFS070G03+           GAGATAGATAGGGATCTCGTGATATAAAAAAGGCAGAAGCAAAGAATGAATGCGATATTG
JMSF024D23+           GAGATAGATAGGGATCTCGTGATATAAAAAAGGCAGAAGCAAAGAATGAATGCGATATTG
JMFF015J11+           GAGATAGATAGGGATNTCGTGATATAAAAAAGGCAGAAGCAAAGAATGAATGCGATATTG
JMFF033O10+           GAGATAGATAGGGATCTCGTGATATAAAAAAGGCAGAAGCAAAGAATGAATGCGATATTG
JMFS115G09+           GAGATAGATAGGGATCTCGTGATATAAAAAAGGCAGAAGCAAAGAATGAATGCGATATTG
                      ____________________________________________________________
consensus             GAGATAGATAGGGATCTCGTGATATAAAAAAGGCAGAAGCAAAGAATGAATGCGATATTG
 
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JMFS042C03+           CGAGCGAGAATCGGCGGAAGAGA                                     
JMFS143H03+           CGAGCGAGAATCGGCGGAAGAGAGACACAGAGAGAAGGAGAGAGAGA             
JMFS070G03+           CGAGCGAGAATCGGCGGAAGAGAGACACAGAGAGAAGGAGAGAGAGATTTTGATTTTTTT
JMSF024D23+           CGAGCGAGAATCGGCGGAAGAGAGACACAGAGAGAAGGAGAGAGAGATTTTGA-TTTTTT
JMFF015J11+           CGAGCGAGAATCGGCGGAAGAGAGACACAGAGAGAAGGAGAGAGAGATTTTGA-TTTTTT
JMFF033O10+           CGAGCGAGAATCGGCGGAAGAGAGACACAGAGAGAAGGAGAGAGAGATTTTGA-TTTTTT
JMFS115G09+           CGAGCGAGAATCGGCGGAAGAGAGACACAGAGAGAAGGAGAGAGAGATTTTGATTTTTTT
                      ____________________________________________________________
consensus             CGAGCGAGAATCGGCGGAAGAGAGACACAGAGAGAAGGAGAGAGAGATTTTGA-TTTTTT
 
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JMFS070G03+           TTT                                                         
JMSF024D23+           TTTTCTTTTCTTTTCTTTTTCTTCTTC                                 
JMFF015J11+           TTTTCTTTTCTTTTCTTTTTCTTCTTC                                 
JMFF033O10+           TTTTCTTTTCTTTTCTTTTTCTTCTTC                                 
JMFS115G09+           TTTTCTTTTCTTTTCTTTTTCTTCTTCACCTGCTGCTTCACGAGACACCTCTCTCTCCTC
                      ____________________________________________________________
consensus             TTTTCTTTTCTTTTCTTTTTCTTCTTCACCTGCTGCTTCACGAGACACCTCTCTCTCCTC