Contig 006260:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS034E10Sequence642006260 (5)ref|XP_004229746.1|157PREDICTED: uncharacterized protein LOC101257405 [Solanum lycopersicum]
JMFS081D07Sequence585006260 (5)gb|EYU31893.1|8e-35hypothetical protein MIMGU_mgv1a0019611mg, partial [Erythranthe guttata]
JMFS116A04Sequence544006260 (5)ref|XP_004229746.1|154PREDICTED: uncharacterized protein LOC101257405 [Solanum lycopersicum]
JMFS132F11Sequence638006260 (5)ref|XP_004229746.1|157PREDICTED: uncharacterized protein LOC101257405 [Solanum lycopersicum]
JMSF050H10Sequence631006260 (5)ref|XP_004229746.1|162PREDICTED: uncharacterized protein LOC101257405 [Solanum lycopersicum]763012777 (3)ref|XP_011089387.1|310PREDICTED: uncharacterized protein LOC105170351 [Sesamum indicum]

Alignment

This contig is upended


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JMFS132F11+                                                                GTTTTCG
JMFS034E10+                                                               AGTTTTCG
                      ____________________________________________________________
consensus                                                                 AGTTTTCG
 
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JMFS132F11+           TTTTCGAAGAGATTGCGAGCTTTCGGGGTGGATGCGAGGCTCGATTCTGAAAGGATGTGA
JMFS034E10+           TTTTCGAAGAGATTGCGAGCTTTCGGGGTGGATGCGAGGCTCGATTCTGAAAGGATGTGA
                      ____________________________________________________________
consensus             TTTTCGAAGAGATTGCGAGCTTTCGGGGTGGATGCGAGGCTCGATTCTGAAAGGATGTGA
 
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JMFS132F11+           GGGAGCTTGAGGGGCTTTTTCTGGGGAGGTTGTTGGCGGTGGGAGGAGGCGGAGGAGGCG
JMFS034E10+           GGGAGCTTGAGGGGCTTTTTCTGGGGAGGTTGTTGGCGGTGGGAGGAGGCGGAGGAGGCG
JMFS116A04+                                                GGTGGGAGGAGGCGGAGGAGGCG
JMSF050H10+                                 GGGGAGGTTGTTGGCGGTGGGAGGAGGCGGAGGAGGCG
                      ____________________________________________________________
consensus             GGGAGCTTGAGGGGCTTTTTCTGGGGAGGTTGTTGGCGGTGGGAGGAGGCGGAGGAGGCG
 
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JMFS132F11+           GAGAGGATGTGGGGGAGTTTGGAGGATGCAATGGTGGGGGAACCGGAAGGAGAGAAGTGC
JMFS034E10+           GAGAGGATGTGGGGGAGTTTGGAGGATGCAATGGTGGGGGAACCGGAAGGAGAGAAGTGC
JMFS116A04+           GAGAGGATGTGGGGGAGTTTGGAGGATGCAATGGTGGGGGAACCGGAAGGAGAGAAGTGC
JMSF050H10+           GAGAGGATGTGGGGGAGTTTGGAGGATGCAATGGTGGGGGAACCGGAAGGAGAGAAGTGC
JMFS081D07+                          AGTTTGGAGGATGCAATGGTGGGGGAACCGGAAGGAGANAAGTGC
                      ____________________________________________________________
consensus             GAGAGGATGTGGGGGAGTTTGGAGGATGCAATGGTGGGGGAACCGGAAGGAGAGAAGTGC
 
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JMFS132F11+           GGCGGTGGCGGCGGAGGAGGAGTGTGAATAGACGGAGACGGCGGGTGGATCTTAACCGGA
JMFS034E10+           GGCGGTGGCGGCGGAGGAGGAGTGTGAATAGACGGAGACGGCGGGTGGATCTTAACCGGA
JMFS116A04+           GGCGGTGGCGGCGGAGGAGGAGTGTGAATAGACGGAGACGGCGGGTGGATCTTAACCGGA
JMSF050H10+           GGCGGTGGCGGCGGAGGAGGAGTGTGAATAGACGGAGACGGCGGGTGGATCTTAACCGGA
JMFS081D07+           GGCGGTGGCGGCGGAGGAGGAGTGTGAATAGACGGAGACGGCGGGTGGATCTTAACCGGA
                      ____________________________________________________________
consensus             GGCGGTGGCGGCGGAGGAGGAGTGTGAATAGACGGAGACGGCGGGTGGATCTTAACCGGA
 
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JMFS132F11+           GGAGGAGTTTTGAAGGCGGATTCAGTGCGGAGGACCACCGCCGGAGCTTGATCGGAAACG
JMFS034E10+           GGAGGAGTTTTGAAGGCGGATTCAGTGCGGAGGACCACCGCCGGAGCTTGATCGGAAACG
JMFS116A04+           GGAGGAGTTTTGAAGGCGGATTCAGTGCGGAGGACCACCGCCGGAGCTTGATCGGAAACG
JMSF050H10+           GGAGGAGTTTTGAAGGCGGATTCAGTGCGGAGGACCACCGCCGGAGCTTGATCGGAAACG
JMFS081D07+           GGAGGAGTTTTGAAGGCGGATTCAGTGCGGAGGACCACCGCCGGAGCTTGATCGGAAACG
                      ____________________________________________________________
consensus             GGAGGAGTTTTGAAGGCGGATTCAGTGCGGAGGACCACCGCCGGAGCTTGATCGGAAACG
 
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JMFS132F11+           GAGAGAACTTCGCCGGAGGCGAAGCAAGTGAGGGCGGAGCCAGTGAGTCGAAGCGAGCGG
JMFS034E10+           GAGAGAACTTCGCCGGAGGCGAAGCAAGTGAGGGCGGAGCCAGTGAGTCGAAGCGAGCGG
JMFS116A04+           GAGAGAACTTCGCCGGAGGCGAAGCAAGTGAGGGCGGAGCCAGTGAGTCGAAGCGAGCGG
JMSF050H10+           GAGAGAACTTCGCCGGAGGCGAAGCAAGTGAGGGCGGAGCCAGTGAGTCGAAGCGAGCGG
JMFS081D07+           GAGAGAACTTCGCCGGAGGCGAAGCAAGTGAGGGCGGAGCCAGTGAGTCGAAGCGAGCGG
                      ____________________________________________________________
consensus             GAGAGAACTTCGCCGGAGGCGAAGCAAGTGAGGGCGGAGCCAGTGAGTCGAAGCGAGCGG
 
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JMFS132F11+           CAGTAATCAGAATGAGCAGACGCCAGGTGGTGGCGAGCATAGACGGCCTCCTTCATCAAC
JMFS034E10+           CAGTAATCAGAATGAGCAGACGCCAGGTGGTGGCGAGCATAGACGGCCTCCTTCATCAAC
JMFS116A04+           CAGTAATCAGAATGAGCAGACGCCAGGTGGTGGCGAGCATAGACGGCCTCCTTCATCAAC
JMSF050H10+           CAGTAATCAGAATGAGCAGACGCCAGGTGGTGGCGAGCATAGACGGCCTCCTTCATCAAC
JMFS081D07+           CAGTAATCAGAATGAGCAGACGCCAGGTGGTGGCGAGCATAGACGGCCTCCTTCATCAAC
                      ____________________________________________________________
consensus             CAGTAATCAGAATGAGCAGACGCCAGGTGGTGGCGAGCATAGACGGCCTCCTTCATCAAC
 
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JMFS132F11+           CGCCGCCGCTCCTTGCACCGCCGCACCGTGTCCTCATTATCCAGCTTCGAAGCCGCGCAT
JMFS034E10+           CGCCGCCGCTCCTTGCACCGCCGCACCGTGTCCTCATTATCCAGCTTCGAAGCCGCGCAT
JMFS116A04+           CGCCGCCGCTCCTTGCACCGCCGCACCGTGTCCTCATTATCCAGCTTCGAAGCCGCGCAT
JMSF050H10+           CGCCGCCGCTCCTTGCACCGCCGCACCGTGTCCTCATTATCCAGCTTCGAAGCCGCGCAT
JMFS081D07+           CGCCGCCGCTCCTTGCACCGCCGCACCGTGTCCTCATTATCCAGCTTCGAAGCCGCGCAT
                      ____________________________________________________________
consensus             CGCCGCCGCTCCTTGCACCGCCGCACCGTGTCCTCATTATCCAGCTTCGAAGCCGCGCAT
 
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JMFS132F11+           CCCATTTCCTATCCCGGAAACAAAGGTGAAAAAGCAAGCTGGTGTTCGGACGGTGCCTAA
JMFS034E10+           CCCATTTCCTATCCCGGAAACAAAGGTGAAAAAGCAAGCTGGTGTTCGGACGGTGCCTAA
JMFS116A04+           CCCATTTCCTATCCCGGAAACAAAGGTGAAAAAGCAAGCTGGTGTTCGGACGGTGCCTAA
JMSF050H10+           CCCATTTCCTATCCCGGAAACAAAGGTGAAAAAGCAAGCTGGTGTTCGGACGGTGCCTAA
JMFS081D07+           CCCATTTCCTATCCCGGAAACAAAGGTGAAAAAGCAAGCTGGTGTTCGGACGGTGCCTAA
                      ____________________________________________________________
consensus             CCCATTTCCTATCCCGGAAACAAAGGTGAAAAAGCAAGCTGGTGTTCGGACGGTGCCTAA
 
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JMFS132F11+           AGTGGCGGAGAAAGTATTTTGAAGACTACCGGAGAGGTACAAAAGCGGCGGAGCAGAAGG
JMFS034E10+           AGTGGCGGAGAAAGTATTTTGAAGACTACCGGAGAGGTACAAAAGCGGCGGAGCAGAAGG
JMFS116A04+           AGTGGCGGAGAAAGTATTTTGAAGACTACCGGAGAGGTACAAAAGCGGCGGAGCAGAAGG
JMSF050H10+           AGTGGCGGAGAAAGTATTTTGAAGACTACCGGAGAGGTACAAAAGCGGCGGAGCAGAAGG
JMFS081D07+           AGTGGCGGAGAAAGTATTTTGAAGACTACCGGAGAGGTACAAAAGCGGCGGAGCAGAAGG
                      ____________________________________________________________
consensus             AGTGGCGGAGAAAGTATTTTGAAGACTACCGGAGAGGTACAAAAGCGGCGGAGCAGAAGG
 
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JMFS132F11+           CGGTTGGCGGCGGAGTAGATATAGTGTGTAC                             
JMFS034E10+           CGGTTGGCGGCGGAGTAGATATAGTGTGTACTCC                          
JMFS116A04+           CGGTTGGCGGCGGAGTAGATATAGTGTGTACTCC                          
JMSF050H10+           CGGTTGGCGGCGGAGTAGATATAGTGTGTACTCCTCCCATCTATCTGATTCTGAGCACTT
JMFS081D07+           CGGTTGGCGGCGGAGTAGATATAGTGTGTACTCCTCCCATCTATCTGATTCTGAGCACTT
                      ____________________________________________________________
consensus             CGGTTGGCGGCGGAGTAGATATAGTGTGTACTCCTCCCATCTATCTGATTCTGAGCACTT
 
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JMSF050H10+           CAGCTCACACAGTTATCTATCTTCTTTGACATTACTCGAAACTCGAAAGGC         
JMFS081D07+           CAGCTCACACAGTTATCTATCTTCTTTGACATTACTCGAAACTCGAAAGGCAGCACTTTG
                      ____________________________________________________________
consensus             CAGCTCACACAGTTATCTATCTTCTTTGACATTACTCGAAACTCGAAAGGCAGCACTTTG