Contig 006258:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS024C04Sequence629006258 (4)ref|XP_006358537.1|287PREDICTED: uncharacterized protein LOC102584209 [Solanum tuberosum]
JMFS080D02Sequence660006258 (4)ref|XP_006358537.1|287PREDICTED: uncharacterized protein LOC102584209 [Solanum tuberosum]
JMFS145D07Sequence617006258 (4)ref|XP_006358537.1|288PREDICTED: uncharacterized protein LOC102584209 [Solanum tuberosum]
JMSF022A23Sequence654006258 (4)ref|XP_009619940.1|239PREDICTED: uncharacterized protein LOC104111850 [Nicotiana tomentosiformis]771022536

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF022A23+ TCCATAACTGCTATTTACAAACTGCTTTGATT
                      ____________________________________________________________
consensus TCCATAACTGCTATTTACAAACTGCTTTGATT
 
. : . : . : . : . : . :
JMSF022A23+ CAGTATTAGTAAGAGCAGGGCCCCCAGCTGAAAGGCTTGTCCAGAGCCATACAGTCTTGG
JMFS145D07+ G
                      ____________________________________________________________
consensus CAGTATTAGTAAGAGCAGGGCCCCCAGCTGAAAGGCTTGTCCAGAGCCATACAGTCTTGG
 
. : . : . : . : . : . :
JMSF022A23+ CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
JMFS145D07+ CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
JMFS024C04+ CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
JMFS080D02+ CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
                      ____________________________________________________________
consensus CTGCAGCAACAAGTGCAGCAGATGCTTTTTGAGGTTGTGCTAAAAGAATATTATATCTAC
 
. : . : . : . : . : . :
JMSF022A23+ GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
JMFS145D07+ GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
JMFS024C04+ GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
JMFS080D02+ GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
                      ____________________________________________________________
consensus GCATGCGCAGCTGGTGGAGAGCATTAGAAAAATCCCGGTCACCAGATATCAATAGATAAT
 
. : . : . : . : . : . :
JMSF022A23+ TAGCAGGTGCAGGATTGTCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
JMFS145D07+ TAGCAGGTGCAGGATTGTCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
JMFS024C04+ TAGCAGGTGCAGGATTATCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
JMFS080D02+ TAGCAGGTGCAGGATTGTCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
                      ____________________________________________________________
consensus TAGCAGGTGCAGGATTGTCAACTGCCCAGAATAACATATCCACCAGAATCTTCTTATCGC
 
. : . : . : . : . : . :
JMSF022A23+ TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
JMFS145D07+ TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
JMFS024C04+ TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
JMFS080D02+ TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
                      ____________________________________________________________
consensus TTGCATCTTTAACACCAGCGGGGACATGGTTGAGGGCGATGCCGGTGCTATTGAGGGCCT
 
. : . : . : . : . : . :
JMSF022A23+ GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
JMFS145D07+ GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
JMFS024C04+ GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
JMFS080D02+ GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
                      ____________________________________________________________
consensus GCTGAACCGACGGCGAGATCTTGGTAGTATCCCCGTAGGCGGAGATGGAGACGGGGCCGC
 
. : . : . : . : . : . :
JMSF022A23+ AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGC
JMFS145D07+ AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGCGTGCGGATCGGAGC
JMFS024C04+ AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGCGTGCGGATCGGAGC
JMFS080D02+ AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGCGTGCGGATCGGAGC
                      ____________________________________________________________
consensus AGTAGTTCAATTTGACCAACGCCGAGCTAATATTCTGCGCGATCGCGTGCGGATCGGAGC
 
. : . : . : . : . : . :
JMFS145D07+ CCCTGGGCACCTGGCAGTTCTCTATGTCCCACCACACCGATATCCTCGCTCCCGAATATA
JMFS024C04+ CCCTGGGCACCTGGCAGTTCTCTATGTCCCACCACACCGATATCCTCGCTCCCGAATATA
JMFS080D02+ CCCTGGGCACCTGGCAGTTCTCTATGTCCCACCACACCGATATCCTCGCTCCCGAATATA
                      ____________________________________________________________
consensus CCCTGGGCACCTGGCAGTTCTCTATGTCCCACCACACCGATATCCTCGCTCCCGAATATA
 
. : . : . : . : . : . :
JMFS145D07+ GCGCCTCCGCCGCTTCCGACGGCTGCTGCATCGCCAACGCTCCTCCACCTACTGCTCCGT
JMFS024C04+ GCGCCTCCGCCGCTTCCGACGGCTGCTGCATCGCCAACGCTCCTCCACCTACTGCTCCGT
JMFS080D02+ GCGCCTCCGCCGCTTCCGACGGCTGCTGCATCGCCAACGCTCCTCCACCTACTGCTCCGT
                      ____________________________________________________________
consensus GCGCCTCCGCCGCTTCCGACGGCTGCTGCATCGCCAACGCTCCTCCACCTACTGCTCCGT
 
. : . : . : . : . : . :
JMFS145D07+ TCCCGCCCGCTCCACCCATGGATAACGACGATCGCCGCAAAAGGAAAGTCGGAAAGTATA
JMFS024C04+ TCCCGCCCGCTCCACCCATGGATAACGACGATCGCCGCAAAAGGAAAGTCGGAAAGTATA
JMFS080D02+ TCCCGCCCGCTCCACCCATGGATAACGACGATCGCCGCAAAAGGAAAGTCGGAAAGTATA
                      ____________________________________________________________
consensus TCCCGCCCGCTCCACCCATGGATAACGACGATCGCCGCAAAAGGAAAGTCGGAAAGTATA
 
. : . : . : . : . : . :
JMFS145D07+ GTGGCTACGACTTTAGATTGTCGGAAATGGCGCACGATAGCAAGCAAGCACAGCTGT
JMFS024C04+ GTGGCTACGACTTTAGATTGTCGGAAATGGCGCACGATAGCAAGCAAGCACAGCTGT-AA
JMFS080D02+ GTGGCTACGACTTTAGATTGTCGGAAATGGCGCACGATAGCAAGCAAGCACAGCTGTGAA
                      ____________________________________________________________
consensus GTGGCTACGACTTTAGATTGTCGGAAATGGCGCACGATAGCAAGCAAGCACAGCTGTGAA
 
. : . : . : . : . : . :
JMFS024C04+ GCTTCTAGATTATCCTAGTTCGCTAATTTG
JMFS080D02+ GCTTCTAGATTATCCTAGTTCGCTAATTTGTTGGTTTTCAGCGGGCGGAGCCTAAAATAG
                      ____________________________________________________________
consensus GCTTCTAGATTATCCTAGTTCGCTAATTTGTTGGTTTTCAGCGGGCGGAGCCTAAAATAG