Contig 006256:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS079B05Sequence554006256 (2)ref|XP_010654695.1|2e-10PREDICTED: epsin [Vitis vinifera]
JMSF025O21Sequence266006256 (2)762001376 (2)ref|XP_010318560.1|98.2PREDICTED: uncharacterized protein LOC101247414 [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS079B05+ CCCTCCGCCACCGT
                      ____________________________________________________________
consensus CCCTCCGCCACCGT
 
. : . : . : . : . : . :
JMFS079B05+ TGCATCTGTTAGATGCTCACCAACACCTTCTTCTTCACCAACTGGCGCACGTCCCTCGTC
                      ____________________________________________________________
consensus TGCATCTGTTAGATGCTCACCAACACCTTCTTCTTCACCAACTGGCGCACGTCCCTCGTC
 
. : . : . : . : . : . :
JMFS079B05+ GTACTCTTCTTCCTCCTCCACATACTCCTCATACTATTTGTCGTACTCCGACTCCTCCCC
                      ____________________________________________________________
consensus GTACTCTTCTTCCTCCTCCACATACTCCTCATACTATTTGTCGTACTCCGACTCCTCCCC
 
. : . : . : . : . : . :
JMFS079B05+ TTCCTGTTCGTCATATTCCGCAACCCCGCCTTGCTCCTCCAACTCTCCATCGGAATCAAT
                      ____________________________________________________________
consensus TTCCTGTTCGTCATATTCCGCAACCCCGCCTTGCTCCTCCAACTCTCCATCGGAATCAAT
 
. : . : . : . : . : . :
JMFS079B05+ CCTCCGAGGCGGCTTCTCTCTCCTATCCTGCTTTTCCCTTTCTCCTCCGGTCTCCTCCTC
                      ____________________________________________________________
consensus CCTCCGAGGCGGCTTCTCTCTCCTATCCTGCTTTTCCCTTTCTCCTCCGGTCTCCTCCTC
 
. : . : . : . : . : . :
JMSF025O21+ TTCAGCGACAACTTCGCCTCCTCCGGATCGCT
JMFS079B05+ ATCGTCGCTCGCCTCTCTCCTCCGCATATTCAGCGACAACTTCGCCTCCTCCGGATCGCT
                      ____________________________________________________________
consensus ATCGTCGCTCGCCTCTCTCCTCCGCATATTCAGCGACAACTTCGCCTCCTCCGGATCGCT
 
. : . : . : . : . : . :
JMSF025O21+ NTCGTAGTCCACCCCCTNTTCTCCCACTCCAGCCATCGCCTCACTCATAATAACAAAAAC
JMFS079B05+ CTCGTAGTCCACCCCCTCTTCTCCCACTCCAGCCATCGCCTCACTCATAATAACAAAAAC
                      ____________________________________________________________
consensus CTCGTAGTCCACCCCCTCTTCTCCCACTCCAGCCATCGCCTCACTCATAATAACAAAAAC
 
. : . : . : . : . : . :
JMSF025O21+ CCCTAACTCCTCACACGATACTCAGAAAAACCGAAGAAACCAAAAACACAATCTTGGTCA
JMFS079B05+ CCCTAACTCCTCACACGATACTCAGAAAAACCGAAGAAACCAAAAACACAATCTTGGTCA
                      ____________________________________________________________
consensus CCCTAACTCCTCACACGATACTCAGAAAAACCGAAGAAACCAAAAACACAATCTTGGTCA
 
. : . : . : . : . : . :
JMSF025O21+ ACAATCTCGCTCCAATCAAAACCCTAAGTTGAGAAATTACTGAAATTGGAATTAGAATGG
JMFS079B05+ ACAATCTCGCTCCAATCAAAACCCTAAGTTGAGAAATTACTGAAATTGGAATTAGAATGG
                      ____________________________________________________________
consensus ACAATCTCGCTCCAATCAAAACCCTAAGTTGAGAAATTACTGAAATTGGAATTAGAATGG
 
. : . : . : . : . : . :
JMSF025O21+ AAGGCTTGATCTTTAAG-GTGTGATCCGGATTTTCTAGGGCTAGGTTAGACCA
JMFS079B05+ AAGGCTTGATCTTTAAGAGTGTGATCCGGATTTTCTAGGGCTAGGTTAGACCATGGAAAA
                      ____________________________________________________________
consensus AAGGCTTGATCTTTAAGAGTGTGATCCGGATTTTCTAGGGCTAGGTTAGACCATGGAAAA