Contig 006248:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS073H11Sequence627006248 (2)ref|XP_009772099.1|1e-86PREDICTED: systemin receptor SR160 [Nicotiana sylvestris]
JMFS149H01Sequence627006248 (2)ref|XP_009772099.1|1e-84PREDICTED: systemin receptor SR160 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS149H01+ CCATGGAGCAGATTATTCTGAAGGTACAGCACTTTGAGGCTATTTCTAGGGTC
                      ____________________________________________________________
consensus CCATGGAGCAGATTATTCTGAAGGTACAGCACTTTGAGGCTATTTCTAGGGTC
 
. : . : . : . : . : . :
JMFS149H01+ TTTACAAATCCCAGAGGGAATGGAACCAGAGATATTATTAGAACTCAAATCTAAGGTCTC
JMFS073H11+ ATTATTAGAACTCAAATCTAAGGTCTC
                      ____________________________________________________________
consensus TTTACAAATCCCAGAGGGAATGGAACCAGAGATATTATTAGAACTCAAATCTAAGGTCTC
 
. : . : . : . : . : . :
JMFS149H01+ TAAATTCACCAGGCTAGACAGTGACTCAGGCAAGCTACCCACAAAATTATTGAATGAGAA
JMFS073H11+ TAAATTCACCAGGCTAGACAGTGACTCAGGCAAGCTACCCACAAAATTATTGAATGAGAA
                      ____________________________________________________________
consensus TAAATTCACCAGGCTAGACAGTGACTCAGGCAAGCTACCCACAAAATTATTGAATGAGAA
 
. : . : . : . : . : . :
JMFS149H01+ ATCCAATGTCTTCAAGCTAGTGAACTTGAGTAGGGTTTGAAGAGGCAACCCACCAGAGAA
JMFS073H11+ ATCCAATGTCTTCAAGCTAGTGAACTTGAGTAGGGTTTGAAGAGGCAACCCACCAGAGAA
                      ____________________________________________________________
consensus ATCCAATGTCTTCAAGCTAGTGAACTTGAGTAGGGTTTGAAGAGGCAACCCACCAGAGAA
 
. : . : . : . : . : . :
JMFS149H01+ ATTATTGTTGGAGATATCAAGAAGTTCCAAGGCTGAGCAAGCAACAAGGTTGTCAGGGAC
JMFS073H11+ ATTATTGTTGGAGATATCAAGAAGTTCCAAGGCTGAGCAAGCAACAAGGTTGTCAGGGAC
                      ____________________________________________________________
consensus ATTATTGTTGGAGATATCAAGAAGTTCCAAGGCTGAGCAAGCAACAAGGTTGTCAGGGAC
 
. : . : . : . : . : . :
JMFS149H01+ CATACCTGATAAATTATTGAAAGACAAGTCCAATTCCACAAGAGTGCTACATAAATCTCC
JMFS073H11+ CATACCTGATAAATTATTGAAAGACAAGTCCAATTCCACAAGAGTGCTACATAAATCTCC
                      ____________________________________________________________
consensus CATACCTGATAAATTATTGAAAGACAAGTCCAATTCCACAAGAGTGCTACATAAATCTCC
 
. : . : . : . : . : . :
JMFS149H01+ AATATGCTCTGGAAGGACCCCCTGAAAATCATTCCCTCTAAGGTACAAATACTGCAAGCT
JMFS073H11+ AATATGCTCTGGAAGGACCCCCTGAAAATCATTCCCTCTAAGGTACAAATACTGCAAGCT
                      ____________________________________________________________
consensus AATATGCTCTGGAAGGACCCCCTGAAAATCATTCCCTCTAAGGTACAAATACTGCAAGCT
 
. : . : . : . : . : . :
JMFS149H01+ CCCACTGGGGAGCTTAGGGACACCACCCCCAAACTTATTGTTGGTGAGATTGAGGAAACT
JMFS073H11+ CCCACTGGGGAGCTTAGGGACACCACCCCCAAACTTATTGTTGGTGAGATTGAGGAAACT
                      ____________________________________________________________
consensus CCCACTGGGGAGCTTAGGGACACCACCCCCAAACTTATTGTTGGTGAGATTGAGGAAACT
 
. : . : . : . : . : . :
JMFS149H01+ GAGGTTTGGGCAGGAAGAAAGGGAGGCCCCAATATTACCAGTGAACTTGTTGGATGACAG
JMFS073H11+ GAGGTTTGGGCAGGAAGAAAGGGAGGCCCCAATATTACCAGTGAACTTGTTGGATGACAG
                      ____________________________________________________________
consensus GAGGTTTGGGCAGGAAGAAAGGGAGGCCCCAATATTACCAGTGAACTTGTTGGATGACAG
 
. : . : . : . : . : . :
JMFS149H01+ ATCAAGATGCTGCAAAGTAGAGCAGTCTTGAAATGAAGGGAAATTTATGGAGAAATTATT
JMFS073H11+ ATCAAGATGCTGCAAAGTAGAGCAGTCTTGAAATGAAGGGAAATTTATGGAGAAATTATT
                      ____________________________________________________________
consensus ATCAAGATGCTGCAAAGTAGAGCAGTCTTGAAATGAAGGGAAATTTATGGAGAAATTATT
 
. : . : . : . : . : . :
JMFS149H01+ GGCAGAAAGGTCCAAATGAGTCAAATTCTTGAAA
JMFS073H11+ GGCAGAAAGGTCCAAATGAGTCAAATTCTTGAAACTCAACTCTGGGATGTTTCCTGATAA
                      ____________________________________________________________
consensus GGCAGAAAGGTCCAAATGAGTCAAATTCTTGAAACTCAACTCTGGGATGTTTCCTGATAA
 
. : . : . : . : . : . :
JMFS073H11+ CTTGTTACCCTTCAAAGACAACAGCTCAAGCTCAGGGGGCAGCAAGAGAAAGATGTTCTG
                      ____________________________________________________________
consensus CTTGTTACCCTTCAAAGACAACAGCTCAAGCTCAGGGGGCAGCAAGAGAAAGATGTTCTG