Contig 006241:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS029H09Sequence627006241 (2)ref|XP_010653407.1|4e-66PREDICTED: importin subunit beta-1 [Vitis vinifera] emb|CBI18129.3| unnamed prot
JMFS068B03Sequence627006241 (2)ref|XP_010653407.1|3e-65PREDICTED: importin subunit beta-1 [Vitis vinifera] emb|CBI18129.3| unnamed prot

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS029H09+ GTCATATTAGCAAGTAATGATCCAACAAGT
JMFS068B03+ ATATTAGCAAGTAATGATCCAACAAGT
                      ____________________________________________________________
consensus GTCATATTAGCAAGTAATGATCCAACAAGT
 
. : . : . : . : . : . :
JMFS029H09+ TCTGGCCACTCTTTTCGTGGGATTNCAATTGAAGCTATCTTGGCAATCACTTGGGAAGAA
JMFS068B03+ TCTGGCCACTCTNTTCGTGGGATTTCAATTGAAGCTATCTTGGCAATCACTTGGGAAGAA
                      ____________________________________________________________
consensus TCTGGCCACTCTTTTCGTGGGATTTCAATTGAAGCTATCTTGGCAATCACTTGGGAAGAA
 
. : . : . : . : . : . :
JMFS029H09+ GTATGACTGGCATCGCGTACAGAAGAGTTGAGGGTGTTTAGAAGCAAGTTTTTAATTTGG
JMFS068B03+ GTATGACTGGCATCGCGTACAGAAGAGTTGAGGGTGTTTAGAAGCAAGTTTTTAATTTGG
                      ____________________________________________________________
consensus GTATGACTGGCATCGCGTACAGAAGAGTTGAGGGTGTTTAGAAGCAAGTTTTTAATTTGG
 
. : . : . : . : . : . :
JMFS029H09+ GACTTAAGTGAAACATCAATTGCTGTCCATTGTTGAACAAGGTGTTCTTTCGTGGAAGCT
JMFS068B03+ GACTTAAGTGAAACATCAATTGCTGTCCATTGTTGAACAAGGTGTTCTTTCGTGGAAGCT
                      ____________________________________________________________
consensus GACTTAAGTGAAACATCAATTGCTGTCCATTGTTGAACAAGGTGTTCTTTCGTGGAAGCT
 
. : . : . : . : . : . :
JMFS029H09+ TCTTTTGCGTCCAAAGAGTTCTTAAGCACAATACCAGCCAGTCTACGAGATTCAACAGGT
JMFS068B03+ TCTTTTGCGTCCAAAGAGTTCTTAAGCACAATACCAGCCAGTCTACGAGATTCAACAGGT
                      ____________________________________________________________
consensus TCTTTTGCGTCCAAAGAGTTCTTAAGCACAATACCAGCCAGTCTACGAGATTCAACAGGT
 
. : . : . : . : . : . :
JMFS029H09+ TTTCCATCATTGGAGAGTTCAACTGCCAATGACAGAAGAAAAACTGGCAGATTCTGCTCT
JMFS068B03+ TTTCCATCATTGGAGAGTTCAACTGCCAATGACAGAAGAAAAACTGGCAGATTCTGCTCT
                      ____________________________________________________________
consensus TTTCCATCATTGGAGAGTTCAACTGCCAATGACAGAAGAAAAACTGGCAGATTCTGCTCT
 
. : . : . : . : . : . :
JMFS029H09+ TTGAACTGAGTTAGAGTTGCCTCTGCTTCAGTCCGTATCTTTGCATCTGCCGATTGAGCA
JMFS068B03+ TTGAACTGAGTTAGAGTTGCCTCTGCTTCAGTCCGTATCTTTGCATCTGCCGATTGAGCA
                      ____________________________________________________________
consensus TTGAACTGAGTTAGAGTTGCCTCTGCTTCAGTCCGTATCTTTGCATCTGCCGATTGAGCA
 
. : . : . : . : . : . :
JMFS029H09+ GATAGTAGAAAGTTGGTGATCTCCAAAGCCATTTCTTCTCTTAGATGCGAAACCTCCAAG
JMFS068B03+ GATAGTAGAAAGTTGGTGATCTCCAAAGCCATTTCTTCTCTTAGATGCGAAACCTCCAAG
                      ____________________________________________________________
consensus GATAGTAGAAAGTTGGTGATCTCCAAAGCCATTTCTTCTCTTAGATGCGAAACCTCCAAG
 
. : . : . : . : . : . :
JMFS029H09+ TACGAAACACTACGAAATCGACCGACGACGACGCCGCTCGCTAACTAGGGCTTTCTCCTC
JMFS068B03+ TACGAAACACTACGAAATCGACCGACGACGACGCCGCTCGCTAACTAGGGCTTTCTCCTC
                      ____________________________________________________________
consensus TACGAAACACTACGAAATCGACCGACGACGACGCCGCTCGCTAACTAGGGCTTTCTCCTC
 
. : . : . : . : . : . :
JMFS029H09+ GACTTCTCCCTCAATCGAACAGTGACGTGCTTATATATATAAGCGGCGGTTGCTTGTATG
JMFS068B03+ GACTTCTCCCTCAATCGAACAGTGACGTGCTTATATATATAAGCGGCGGTTGCTTGTATG
                      ____________________________________________________________
consensus GACTTCTCCCTCAATCGAACAGTGACGTGCTTATATATATAAGCGGCGGTTGCTTGTATG
 
. : . : . : . : . : . :
JMFS029H09+ TATCGGCGACGGTGAAGGAATGAGAAATTGATGGAGTAGAGAGAGAGAGAAACGGGA
JMFS068B03+ TATCGGCGACGGTGAAGGAATGAGAAATTGATGGAGTAGAGAGAGAGAGAAACGGGAGTA
                      ____________________________________________________________
consensus TATCGGCGACGGTGAAGGAATGAGAAATTGATGGAGTAGAGAGAGAGAGAAACGGGAGTA