Contig 006231:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS145B04+                                            GTAAAGGGCCAACATACTTCACACGAT
                      ____________________________________________________________
consensus                                              GTAAAGGGCCAACATACTTCACACGAT
 
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JMFS145B04+           CACCAGTTTTGAATGTGTTCTTTGATGAGGCAGTAGAAGCCTCCTGCTTAGTCTGAGCAT
                      ____________________________________________________________
consensus             CACCAGTTTTGAATGTGTTCTTTGATGAGGCAGTAGAAGCCTCCTGCTTAGTCTGAGCAT
 
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JMFS145B04+           GAGAACTTATAGCAGAACCACCAGTTATATCTGCCTCTACACTTGAAGCTGGCTTTTTAT
                      ____________________________________________________________
consensus             GAGAACTTATAGCAGAACCACCAGTTATATCTGCCTCTACACTTGAAGCTGGCTTTTTAT
 
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JMFS145B04+           TGAAGCGTAGTACAGCTGCCTGCGCGGCCCGTTTAGTAAACACACCTGTTCTCTCAGGCT
                      ____________________________________________________________
consensus             TGAAGCGTAGTACAGCTGCCTGCGCGGCCCGTTTAGTAAACACACCTGTTCTCTCAGGCT
 
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JMFS145B04+           TTGGGGCCTCTTTGACAGGATCAAGTTCTTTTGCTGATCCACCAGGCAATACAAGAGAAT
JMFS098F04+                                                 CCACCAGGCAATAGAAGAGAAT
                      ____________________________________________________________
consensus             TTGGGGCCTCTTTGACAGGATCAAGTTCTTTTGCTGATCCACCAGGCAATAGAAGAGAAT
 
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JMFS145B04+           CAACTACTAGAAGCCTAGCACCAAAATACTTAGCAAGTGCCTTAGCCAACGTCTCCTGAT
JMFS098F04+           CGACAATTAGAAGCCTCGCATCAAAATATTTAGTGAGTGCCTTGATCAATGTCTCTTGAT
                      ____________________________________________________________
consensus             CGACTATTAGAAGCCTCGCATCAAAATATTTAGTGAGTGCCTTGGTCAATGTCTCTTGAT
 
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JMFS145B04+           AGATTTCTGAGCCTGCTGGACCTGATAACAAAATCCTTGGGCATACTGTGGGGAGTTCAG
JMFS098F04+           ATATTTCGGAGCCTGCTGGGCCCGATAACAAAATCCTTGGGCATAATGTGGGAAGATCAG
JMFS094H05+                                                                   TCAG
                      ____________________________________________________________
consensus             ATATTTCTGAGCCTGCTGGGCCTGATAACAAAATCCTTGGGCATACTGTGGGGAGTTCAG
 
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JMFS145B04+           AGGCACACTTTACAAACTTATTGCACTTCAAATGTATGTAAGTTGAAGCAATCAGAACAT
JMFS098F04+           AGGCATACTTTGAAAACTTGTTGCACTTCAAATGTACATAAGTTGAAGCAATCAGGACAT
JMFS094H05+           AGGCATACTTTGAAAACTTGTTGCACTTCAAATGTACATAAGTTGAAGCAATCAGGACAT
                      ____________________________________________________________
consensus             AGGCATACTTTGAAAACTTGTTGCACTTCAAATGTACATAAGTTGAAGCAATCAGGACAT
 
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JMFS145B04+           TCTTTGTTATTTCACTCAAGTAATAAGGAAAATCCTCGAATGAGACTTCAATATTATTGG
JMFS098F04+           TCTTTGTTGTTTCACTCAGGTAATATGGGAAATTTTCGAATGAGACCTCAATATTCTTGG
JMFS094H05+           T---TGTTGTTTCACTCAGGTAATATGGGAAATTTTCGAATGAGACCTCAATATTCTTGG
                      ____________________________________________________________
consensus             TCTTTGTTGTTTCACTCAGGTAATATGGGAAATTTTCGAATGAGACCTCAATATTCTTGG
 
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JMFS145B04+           AATCAAGTATTGTTTGTTGCAGCCCATCTTTAAAAGCTTGACGCCT              
JMFS098F04+           AATCAAGCACTGCTTGTTGCAACCCATCTTTAAATGATTGACGCCTAGCAGAAATCAAAA
JMFS094H05+           AATCAAGCACTGCTTGTTGCAACCCATCTTTAAATGATTGACGCCTAGCAGAAATCAAAA
JMFS054H12+                                            ATGATTGACGCCTAGCAGAAATCAAAA
                      ____________________________________________________________
consensus             AATCAAGCACTGCTTGTTGCAACCCATCTTTAAATGATTGACGCCTAGCAGAAATCAAAA
 
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JMFS098F04+           CTGGAGGATCAAAATCCTTGGATTCTCTCATTCCTCTTTGCTCCTCCAGAATTTTAGTTA
JMFS094H05+           CTGGAGGATCAAAATCCTTGGATTCTCTCATTCCTCTTTGCTCCTCCAGAATTTTAGTTA
JMFS054H12+           CTGGAGGATCAAAATCCTTGGATTCTCTCATTCCTCTTTGCTCCTCCAGAATTTTAGTTA
                      ____________________________________________________________
consensus             CTGGAGGATCAAAATCCTTGGATTCTCTCATTCCTCTTTGCTCCTCCAGAATTTTAGTTA
 
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JMFS098F04+           AGCTATTGCGTAAATCAAACTCAGGAAGAGATGACCCAGCAAACATTTGTAAGAGT    
JMFS094H05+           AGCTATTGCGTAAATCAAACTCAGGAAGAGATGACCCAGCAAACATTTGTAAGAGTGGCC
JMFS054H12+           AGCTATTGCGTAAATCAAACTCAGGAAGAGATGACCCAGCAAACATTTGTAAGAGTGGCC
                      ____________________________________________________________
consensus             AGCTATTGCGTAAATCAAACTCAGGAAGAGATGACCCAGCAAACATTTGTAAGAGTGGCC
 
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JMFS094H05+           TCAAATCCCCAGATGCCCCAGTTGCCTTTCCAATTTCTGTATCAACACAATCTAGTGCAC
JMFS054H12+           TCAAATCCCCAGATGCCCCAGTTGCCTTTCCAATTTCTGTATCAACACAATCTAGTGCAC
                      ____________________________________________________________
consensus             TCAAATCCCCAGATGCCCCAGTTGCCTTTCCAATTTCTGTATCAACACAATCTAGTGCAC
 
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JMFS094H05+           CATTATCAAGATTCATGTTGTCATTAGCATAATCAGGGGTTGTAGTGCCTGTCTTGTCAA
JMFS054H12+           CATTATCAAGATTCATGTTGTCATTAGCATAATCAGGGGTTGTAGTGCCTGTCTTGTCAA
                      ____________________________________________________________
consensus             CATTATCAAGATTCATGTTGTCATTAGCATAATCAGGGGTTGTAGTGCCTGTCTTGTCAA
 
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JMFS094H05+           CAAGAGATACATCATTATGATCAGAAGCATCCTTCATATCAGCAACTGCATCATCTTTAT
JMFS054H12+           CAAGAGATACATCATTATGATCAGAAGCATCCTTCATATCAGCAACTGCATCATCTTTAT
                      ____________________________________________________________
consensus             CAAGAGATACATCATTATGATCAGAAGCATCCTTCATATCAGCAACTGCATCATCTTTAT
 
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JMFS094H05+           CTAGCACTCCACTAGCAGCTGGTAGTATTGACATTTCTGCTGCTTGTTTTACATCTTTGT
JMFS054H12+           CTAGCACTCCACTAGCAGCTGGTAGTATTGACATTTCTGCTGCTTGTTTTACATCTTTGT
                      ____________________________________________________________
consensus             CTAGCACTCCACTAGCAGCTGGTAGTATTGACATTTCTGCTGCTTGTTTTACATCTTTGT
 
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JMFS094H05+           TGTTATGGACTGATGGAGGAAGAAGCGATAACTCTTTCTTAAGATTTGATAATGAGGCTA
JMFS054H12+           TGTTATGGACTGATGGAGGAAGAAGCGATAACTCTTTCTTAAGATTTGATAATGAGGCTA
                      ____________________________________________________________
consensus             TGTTATGGACTGATGGAGGAAGAAGCGATAACTCTTTCTTAAGATTTGATAATGAGGCTA
 
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JMFS094H05+           AGGTAGATGCAACTGCT                                           
JMFS054H12+           AGGTAGATGCAACTGCTACAGTAGATGGGTCCCCTGATCTTGCCTCAAAATGAACTCCTT
                      ____________________________________________________________
consensus             AGGTAGATGCAACTGCTACAGTAGATGGGTCCCCTGATCTTGCCTCAAAATGAACTCCTT
 
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JMFS054H12+           TGATTGGCCCACTATGGGCTTCTAAAATGCTCACTGGATGTGGTATGGTTGTAGCAGAGA
                      ____________________________________________________________
consensus             TGATTGGCCCACTATGGGCTTCTAAAATGCTCACTGGATGTGGTATGGTTGTAGCAGAGA
 
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JMFS054H12+           TGTTTTCATTGCCAAGTTTTTGGAAAATATAAGCATGCCTGCCAGACGAGCCAAACACCA
                      ____________________________________________________________
consensus             TGTTTTCATTGCCAAGTTTTTGGAAAATATAAGCATGCCTGCCAGACGAGCCAAACACCA