clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF046O16 | Sequence | 537 | 006229 (4) | ref|XP_008342079.1| | 2e-70 | PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Malus domestic | 459 | 007675 (2) | ref|XP_009784294.1| | 2e-49 | PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Nicotiana sylv |
JMFS052B04 | Sequence | 586 | 006229 (4) | ref|XP_006357528.1| | 3e-13 | PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5-like [Solanum t | |||||
JMFS091D01 | Sequence | 616 | 006229 (4) | gb|KDO50773.1| | 2e-91 | hypothetical protein CISIN_1g007568mg [Citrus sinensis] | |||||
JMFS119C07 | Sequence | 643 | 006229 (4) | ref|XP_007043530.1| | 3e-38 | Indole-3-acetic acid-amido synthetase GH3.5 [Theobroma cacao] gb|EOX99361.1| Ind |
This contig is upended
. : . : . : . : . : . :
JMFS091D01+ GTAACCCCAGCAGGAGGTGACAGTACGTCGACTGCTTGTAGTCGCCGCTGGAAATCACCT
____________________________________________________________
consensus GTAACCCCAGCAGGAGGTGACAGTACGTCGACTGCTTGTAGTCGCCGCTGGAAATCACCT
. : . : . : . : . : . :
JMFS091D01+ CCTCCGGGCTGCAAGTAAACGACTTAATCTCCCGCTGCTTCACCTTAAACTCCTCGCTCG
____________________________________________________________
consensus CCTCCGGGCTGCAAGTAAACGACTTAATCTCCCGCTGCTTCACCTTAAACTCCTCGCTCG
. : . : . : . : . : . :
JMFS091D01+ CGAAAATGTGTGTCGTCACCGTCGCCGCCGTCACTCCTCCCTTCGTCTTGAACTGCTTGC
JMFF046O16+ CGCCGCCGTCACTCCTCCCTTCGTCTTGAACTGCTGGC
____________________________________________________________
consensus CGAAAATGTGTGTCGTCACCGTCGCCGCCGTCACTCCTCCCTTCGTCTTGAACTGCTTGC
. : . : . : . : . : . :
JMFS091D01+ TGCTGTATATGAACTCCAGAATCCTCTTCCCTTCACTTGTCGGATAAATCCTGGATCTAA
JMFF046O16+ TGCTGTATATGAACTCCAGAATCCTCTTCCCTTCACTTGTCGGATAAATCCTGGATCTAA
____________________________________________________________
consensus TGCTGTATATGAACTCCAGAATCCTCTTCCCTTCACTTGTCGGATAAATCCTGGATCTAA
. : . : . : . : . : . :
JMFS091D01+ AAGCAGCTGCGAGCTTGGAGATTTGAAGGGTGGTTTGTGAGCTATGGCGAGTGAAGGGTA
JMFF046O16+ AAGCAGCTGCGAGCTTGGAGATTTGAAGGGTGGTTTGTGAGCTATGGCGAGTGAAGGGTA
____________________________________________________________
consensus AAGCAGCTGCGAGCTTGGAGATTTGAAGGGTGGTTTGTGAGCTATGGCGAGTGAAGGGTA
. : . : . : . : . : . :
JMFS091D01+ TAAACTTCTGTCGACCCTCTGTAGTTCCAGAACTTAAGGATAAGGTGGTGATGGGGTGGT
JMFF046O16+ TAAACTTCTGTCGACCCTCTGTAGTTCCAGAACTTAAGGATAAGGTGGTGATGGGGTGGT
JMFS119C07+ AAACTTCTGTCGACCCTCTGTAGTTCCAGAACTTAAGGATAAGGTGGTGATGGGGTGGT
____________________________________________________________
consensus TAAACTTCTGTCGACCCTCTGTAGTTCCAGAACTTAAGGATAAGGTGGTGATGGGGTGGT
. : . : . : . : . : . :
JMFS091D01+ GAGTGAGGAGAGGGGCGGAGTCGCCGTCGGCAATCCGTTGAACGTAAGGCTCCAAATCTG
JMFF046O16+ GAGTGAGGAGAGGGGCGGAGTCGCCGTCGGCAATCCGTTGAACGTAAGGCTCCAAATCTG
JMFS119C07+ GAGTGAGGAGAGGGGCGGAGTCGCCGTCGGCAATCCGTTGAACGTAAGGCTCCAAATCTG
____________________________________________________________
consensus GAGTGAGGAGAGGGGCGGAGTCGCCGTCGGCAATCCGTTGAACGTAAGGCTCCAAATCTG
. : . : . : . : . : . :
JMFS091D01+ CATGAGAAGAAAGAGGGACCAAAGAAGTGTAAAGGGATTCCAATAATGCGCCATCCTCCA
JMFF046O16+ CATGAGAAGAAAGAGGGACCAAAGAAGTGTAAAGGGATTCCAATAATGCGCCATCCTCCA
JMFS119C07+ CATGAGAAGAAAGAGGGACCAAAGAAGTGTAAAGGGATTCCAATAATGCGCCATCCTCCA
____________________________________________________________
consensus CATGAGAAGAAAGAGGGACCAAAGAAGTGTAAAGGGATTCCAATAATGCGCCATCCTCCA
. : . : . : . : . : . :
JMFS091D01+ CATTCATATCTTTATCTCCCACCCATTTCTTCAGATACTCCACGCCGTGGTTCAGTTCAA
JMFF046O16+ CATTCATATCTTTATCTCCCACCCATTTCTTCAGATACTCCACGCCGTGGTTCAGTTCAA
JMFS119C07+ CATTCATATCTTTATCTCCCACCCATTTCTTCAGATACTCCACGCCGTGGTTCAGTTCAA
JMFS052B04+ ATCTCCCACCCATTTCTTCAGATACTCCACGCCGTGGTTCAGTTCAA
____________________________________________________________
consensus CATTCATATCTTTATCTCCCACCCATTTCTTCAGATACTCCACGCCGTGGTTCAGTTCAA
. : . : . : . : . : . :
JMFS091D01+ CAATCCGCCGGAGCGTCTCCCTCTGGACCTGCCCGGCGTTCTCCGCCACCTCGTCGAACC
JMFF046O16+ CAATCCGCCGGAGCGTCTCCCTCTGGACCTGCCCGGCGTTCTCCGCCACCTCGTCGAACC
JMFS119C07+ CAATCCGCCGGAGCGTCTCCCTCTGGACCTGCCCGGCGTTCTCCGCCACCTCGTCGAACC
JMFS052B04+ CAATCCGCCGGAGCGTCTCCCTCTGGACCTGCCCGGCGTTCTCCGCCACCTCGTCGAACC
____________________________________________________________
consensus CAATCCGCCGGAGCGTCTCCCTCTGGACCTGCCCGGCGTTCTCCGCCACCTCGTCGAACC
. : . : . : . : . : . :
JMFS091D01+ ACCGGATTATGTCGCA
JMFF046O16+ ACCGGATTATGTCGCACTCTTGGCTCCCCATGCCCGCCGCCGCCGCTGCTTATTAGCTTC
JMFS119C07+ ACCGGATTATGTCGCACTCTTGGCTCCCCATGCCCGCCGCCGCCGCTGCTTATTAGCTTC
JMFS052B04+ ACCGGATTATGTCGCACTCTTGGCTCCCCATGCCCGCCGCCGCCGCTGCTTATTAGCTTC
____________________________________________________________
consensus ACCGGATTATGTCGCACTCTTGGCTCCCCATGCCCGCCGCCGCCGCTGCTTATTAGCTTC
. : . : . : . : . : . :
JMFF046O16+ TTCAATTCCAGACCGCAAT
JMFS119C07+ TTCAATTCCAGACCGCAATATATATATATATATATATATATATATATATATATATATATA
JMFS052B04+ TTCAATTCCAGACCGCAATATATATATATATATATATATATATATATATATATATATATA
____________________________________________________________
consensus TTCAATTCCAGACCGCAATATATATATATATATATATATATATATATATATATATATATA
. : . : . : . : . : . :
JMFS119C07+ TATAATGTCAAGGCAATAAGCAAAATTGCTTGGTTGGTTGGTTGGTGAAAGCTAAGACTT
JMFS052B04+ TATAATGTCAAGGCAATAAGCAAAATTGCTTGGTTGGTTGGTTGGTGAAAGCTAAGACTT
____________________________________________________________
consensus TATAATGTCAAGGCAATAAGCAAAATTGCTTGGTTGGTTGGTTGGTGAAAGCTAAGACTT
. : . : . : . : . : . :
JMFS119C07+ TGACATAATTATAATGAGGGAAATTTTTTTTTTTTTTTAAAAAAAATATGTTCGTACGTT
JMFS052B04+ TGACATAATTATAATGAGGGAAA-TTTTTTTTTTTTTTAAAAAAAATATGTTCGTACGTT
____________________________________________________________
consensus TGACATAATTATAATGAGGGAAATTTTTTTTTTTTTTTAAAAAAAATATGTTCGTACGTT
. : . : . : . : . : . :
JMFS119C07+ AATTTGGGCTCCATTTTCGCAGTGAAGAGCCCACATACATTATAGTAAAAATCTGGTGGC
JMFS052B04+ AATTTGGGCTCCATTTTCGCAGTGAAGAGCCCACATACATTATAGTAAAAATCTGGTGGC
____________________________________________________________
consensus AATTTGGGCTCCATTTTCGCAGTGAAGAGCCCACATACATTATAGTAAAAATCTGGTGGC
. : . : . : . : . : . :
JMFS119C07+ ATGCCAGAGATACTTAATTATCGGATCCATTGATCTAGAACCAG
JMFS052B04+ ATGCCAGAGATACTTAATTATCGGATCCATTGATCTAGAACCAGAACGTATTGAAGCTAA
____________________________________________________________
consensus ATGCCAGAGATACTTAATTATCGGATCCATTGATCTAGAACCAGAACGTATTGAAGCTAA
. : . : . : . : . : . :
JMFS052B04+ GGATAGAAGAGCTGTCTCCTCATCGCCAATATATTTCAGAAAACTAACGTACGACGCTTT
____________________________________________________________
consensus GGATAGAAGAGCTGTCTCCTCATCGCCAATATATTTCAGAAAACTAACGTACGACGCTTT
. : . : . : . : . : . :
JMFS052B04+ GTAGACCACAGGATTACTGTTTGCAAGTTGCTAGCTAAGAGAGAGAGAGAGAGAAGAGGG
____________________________________________________________
consensus GTAGACCACAGGATTACTGTTTGCAAGTTGCTAGCTAAGAGAGAGAGAGAGAGAAGAGGG