clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF026C01 | Sequence | 328 | 006226 (8) | gb|AEA86327.1| | 2e-40 | ubiquitin-like domain-containing CTD phosphatase [Solanum nigrum] | 771 | 006226 (8) | emb|CBI29735.3| | 8e-92 | unnamed protein product [Vitis vinifera] |
JMFF048C19 | Sequence | 502 | 006226 (8) | gb|KDP42407.1| | 2e-63 | hypothetical protein JCGZ_00204 [Jatropha curcas] | 330 | 006226 (8) | |||
JMFS047C02 | Sequence | 626 | 006226 (8) | gb|KDP42407.1| | 2e-98 | hypothetical protein JCGZ_00204 [Jatropha curcas] | |||||
JMSF017J24 | Sequence | 426 | 006226 (8) | gb|KDP42407.1| | 4e-52 | hypothetical protein JCGZ_00204 [Jatropha curcas] | 747 | 006226 (8) | emb|CBI29735.3| | 4e-109 | unnamed protein product [Vitis vinifera] |
JMSF040N11 | Sequence | 843 | 006226 (8) | emb|CBI29735.3| | 4e-131 | unnamed protein product [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
rJMFF048C19- AAATCTTAACCCATGGTATAATTTGCATAAAGAGAGAATGCCA
rJMFF026C01- TAATTTGCATAGAGAGAGAATGCCA
____________________________________________________________
consensus AAATCTTAACCCATGGTATAATTTGCATAGAGAGAGAATGCCA
. : . : . : . : . : . :
rJMFF048C19- AACATCATTTACATATGGTAACTCAAGTAAGCCCTTCATATCTTCAATGTGTAAAAAGAA
rJMFF026C01- AACATCATTTACATATGGTAACTCAAGTAAGCCCTTCATATCTTCAATGTGTAAAAAGAA
____________________________________________________________
consensus AACATCATTTACATATGGTAACTCAAGTAAGCCCTTCATATCTTCAATGTGTAAAAAGAA
. : . : . : . : . : . :
rJMFF048C19- CAAAGCTTGTGCAGTGCATCATTCTATTTGGCTCAAG-TTTACTCCCACAAATTTATGGA
rJMFF026C01- CAAAGCTTGTGCAGTGCATCATTCTATTTGGCTCAAG-TTTACTCCCACAAATTTATGGA
rJMSF017J24- GTGCAGTGCATCATTCTATTTGGCTCAAG-TTTACTCCCACAAATTTATGGA
rJMSF040N11- GTGCAGTGCATCATTCTATTTGGCTCAAGCTTTACTCCCACAAATTTATGGA
____________________________________________________________
consensus CAAAGCTTGTGCAGTGCATCATTCTATTTGGCTCAAG-TTTACTCCCACAAATTTATGGA
. : . : . : . : . : . :
rJMFF048C19- GATGTTGGAAAATAGAGATGAAGAGGGGGAAAAAAGGAAAAGACAAGACATGCACATTTC
rJMFF026C01- GATGTTGGAAAATAGAGATGAAGAGGGGGAAAAAAGGAAAAGACAAGACATGCACATTTC
rJMSF017J24- GATGTTGGAAAATAGAGATGAAGAGGGGGAAAAAAGGAAAAGACAAGACATGCACATTTC
rJMSF040N11- GATGTTGGAAAATAGAGATGAAGAGGGGGAAAAAAGGAAAAGACAAGACATGCACATTTC
____________________________________________________________
consensus GATGTTGGAAAATAGAGATGAAGAGGGGGAAAAAAGGAAAAGACAAGACATGCACATTTC
. : . : . : . : . : . :
rJMFF048C19- ACCAACGGATACCCAATCTAGTAAAATACTAAAATATCTGTGCAGTTGAAACATAATGTT
rJMFF026C01- ACCAACGGATACCCAATCTAGTAAAATACTAAAATATCTGTGCAGTTGAGACATAATGTT
rJMSF017J24- ACCAACGGATACCCAATCTAGTAAAATACTAAAATATCTGTGCAGTTGAGACATAATGTT
rJMSF040N11- ACCAACGGATACCCAATCTAGTAAAATACTAAAATATCTGTGCAGTTGAGACATAATGTT
____________________________________________________________
consensus ACCAACGGATACCCAATCTAGTAAAATACTAAAATATCTGTGCAGTTGAGACATAATGTT
. : . : . : . : . : . :
rJMFF048C19- GAAGGGCTACATTAGTTCAACCTTCCTGCAAACATGTCTGGTTGCTCA
rJMFF026C01- GAAGGGCTACATTAGTTCAACCTTCCTGCAGACATGTCTGGTTGCTCAGAGTGTCATGTG
rJMSF017J24- GAAGGGCTACATTAGTTCAACCTTCCTGCAGACATGTCTGGTTGCTCAGAGTGTCATGTG
rJMSF040N11- GAAGGGCTACATTAGTTCAACCTTCCTGCAGACATGTCTGGTTGCTCAGAGTGTCATGTG
____________________________________________________________
consensus GAAGGGCTACATTAGTTCAACCTTCCTGCAGACATGTCTGGTTGCTCAGAGTGTCATGTG
. : . : . : . : . : . :
rJMFF026C01- TGTCGACGTCTCTTAAAGTTGTCCTCGTTGTATGATTCCCAATCCTTGTGATTGAGGACA
rJMSF017J24- TGTCGACGTCTCTTAAAGTTGTCCTCGTTGTATGATTCCCAATCCTTGTGATTGAGGACA
rJMSF040N11- TGTCGACGTCTCTTAAAGTTGTCCTCGTTGTATGATTCCCAATCCTTGTGATTGAGGACA
____________________________________________________________
consensus TGTCGACGTCTCTTAAAGTTGTCCTCGTTGTATGATTCCCAATCCTTGTGATTGAGGACA
. : . : . : . : . : . :
rJMFF026C01- CTAATGTCATCAAGATCAGCAATGGCAAGCAAATATTGGGTAAGCTTCATGAGTTCCCGA
rJMSF017J24- CTAATGTCATCAAGATCAGCAATGGCAAGCAAATATTGGGTAAGCTTCATGAGTTCCCGA
rJMSF040N11- CTAATGTCATCAAGATCAGCAATGGCAAGCAAATATTGGGTAAGCTTCATGAGTTCCCGA
____________________________________________________________
consensus CTAATGTCATCAAGATCAGCAATGGCAAGCAAATATTGGGTAAGCTTCATGAGTTCCCGA
. : . : . : . : . : . :
rJMFF026C01- TCAGTGCTCCGATTTGCGTGTGCCTTCCTGAATGGCTTTATGGTCAGACCATTTTGTGGA
rJMSF017J24- TCAGTGCTCCGATTTGCGTGTGCCTTCCTGAATGGCTTTATGGTCAGACCATTTTGTGGA
rJMSF040N11- TCAGTGCTCCGATTTGCGTGTGCCTTCCTGAATGGCTTTATGGTCAGACCATTTTGTGGA
____________________________________________________________
consensus TCAGTGCTCCGATTTGCGTGTGCCTTCCTGAATGGCTTTATGGTCAGACCATTTTGTGGA
. : . : . : . : . : . :
rJMFF026C01- TTCATCACAAAGTTCCTCCTCAGGTCATCAAACATTATAGTGTTTTTTGCACTGTAAAAC
rJMSF017J24- TTCATCACAAAGTTCCTCCTCAGGTCATCAAACATTATAGTGTTTTTTGCACTGTAAAAC
rJMSF040N11- TTCATCACAAAGTTCCTCCTCAGGTCATCAAACATTATAGTGTTTTTTGCACTGTAAAAC
____________________________________________________________
consensus TTCATCACAAAGTTCCTCCTCAGGTCATCAAACATTATAGTGTTTTTTGCACTGTAAAAC
. : . : . : . : . : . :
rJMFF026C01- TCTGGAAACTTGGCCCAAATTAGGCCCAACGGCTTGCAGTCAATGATTCCATGAGAATCT
rJMSF017J24- TCTGGAAACTTGGCCCAAATTAGGCCCAACGGCTTGCAGTCAATGATTCCATGAGAATCT
rJMSF040N11- TCTGGAAACTTGGCCCAAATTAGGCCCAACGGCTTGCAGTCAATGATTCCATGAGAATCT
____________________________________________________________
consensus TCTGGAAACTTGGCCCAAATTAGGCCCAACGGCTTGCAGTCAATGATTCCATGAGAATCT
. : . : . : . : . : . :
rJMFF026C01- GATTGGACTGTTATCCTTGCTAAATGATCAAGCATTGCGGTAATTTTGTAGTTGGGATTG
rJMSF017J24- GATTGGACTGTTATCATTGCTAAATGATCAAGCATTGCGGTAATTTTGTAGTTGGGATTG
rJMSF040N11- GATTGGACTGTTATCATTGCTAAATGATCAAGCATTGCGGTAATTTTGTAGTTGGGATTG
____________________________________________________________
consensus GATTGGACTGTTATCATTGCTAAATGATCAAGCATTGCGGTAATTTTGTAGTTGGGATTG
. : . : . : . : . : . :
rJMFF026C01- CTTAGAACACCAAGTTGTCCCATCTTCAACTCAACCCACTTCATGCTGGTTGCAGACCAT
rJMSF017J24- CTTAGAACACCAAGTTGTCCCATCTTCAACTCAACCCACTTCATGCTGGTTGCAGACCAT
rJMSF040N11- CTTAGAACACCAAGTTGTCCCATCTTCAACTCAACCCACTTCATGCTGGTTGCAGACCAT
____________________________________________________________
consensus CTTAGAACACCAAGTTGTCCCATCTTCAACTCAACCCACTTCATGCTGGTTGCAGACCAT
. : . : . : . : . : . :
rJMFF026C01- ATTATGATATCATACTCTGCATAAACG
rJMSF017J24- ATTATGATATCATACTCTGCATAAACGGCTGAGAGAAATTCATGAAGATAAGGTCTCATG
rJMSF040N11- ATTATGATATCATACTCTGCATAAACGGCTGAGAGAAATTCATGAAGATAAGGTCTCATG
JMFS047C02+ AGAAATTCATGAAGATAAGGTCTCATG
____________________________________________________________
consensus ATTATGATATCATACTCTGCATAAACGGCTGAGAGAAATTCATGAAGATAAGGTCTCATG
. : . : . : . : . : . :
rJMSF017J24- AGTTCAAGTGGGTTCTCTGCTGTTGACC
rJMSF040N11- AGTTCAAGTGGGTTCTCTGCTGTTGACCGGTGATCAAATAGAGTATAGTCAATATCCAGA
JMFF048C19+ CAAATAGAGTATAGTCAATATCCGGA
JMFS047C02+ AGTTCAAGTGGGTTCTCTGCTGTTGACCGGTGATCAAATAGAGTATAGTCAATATCCAGA
____________________________________________________________
consensus AGTTCAAGTGGGTTCTCTGCTGTTGACCGGTGATCAAATAGAGTATAGTCAATATCCAGA
. : . : . : . : . : . :
rJMSF040N11- ACAAGCAGCTTTTTCCCTTCCCGACNTGGATTACGGA-GGGTAATCTTGTATTGCTCAAT
JMFF048C19+ ACAAGCAGCTTTTTCCCTTCCCGACATGGATTACGGAGGGGTAATCTTGTATTGCTCAAT
JMFS047C02+ ACAAGCAGCTTTTTCCCTTCCCGACATGGATTACGGA-GGGTAATCTTGTATTGCTCAAT
____________________________________________________________
consensus ACAAGCAGCTTTTTCCCTTCCCGACATGGATTACGGA-GGGTAATCTTGTATTGCTCAAT
. : . : . : . : . : . :
rJMSF040N11- ACGC
JMFF048C19+ ACGCCTCCTCAGTTTCGGTTTGTGGACTTCTTTATCTTTAATATCAACAGCTTCTTCCTG
JMSF017J24+ ATCAACAGCTTCTTCCTG
JMFS047C02+ ACGCCTCCTCAGTTTCTGTTTGTTGACTTCTTTATCTTTAATATCAACAGCTTCTTCCTG
____________________________________________________________
consensus ACGCCTCCTCAGTTTCTGTTTGTTGACTTCTTTATCTTTAATATCAACAGCTTCTTCCTG
. : . : . : . : . : . :
JMFF048C19+ CCCAATTTCAAAATCATCAACGAGTTCTGGAGAATCCACCTGATCCACAAATATTTCATC
JMFF026C01+ GGAGAATCCACCTGATCCNCAAATATTTCATC
JMSF017J24+ CCCAATTTCAAAATCATCAACGAGTTCTGGAGAATCCACCTGATCCACAAATATTTCATC
JMFS047C02+ CCCAATTTCAAAATCATCAACGAGTTCTGGAGAATCCACCTGATCCACAAATATTTCATC
____________________________________________________________
consensus CCCAATTTCAAAATCATCAACGAGTTCTGGAGAATCCACCTGATCCACAAATATTTCATC
. : . : . : . : . : . :
JMFF048C19+ TTCAACAGTACCGATCATAGTCATTTTGAGGGAGGCTTTGATGGGAATCTGAGAGAGGAG
JMFF026C01+ TTCAACAGTACCGATCATAGTCATTNTGAGGGAGGCTTTGATGGGAATCTGAGAGAGGAG
JMSF017J24+ TTCAACAGTACCGATCATAGTCATTTTGAGGGAGGCTTTGATGGGAATCTGAGAGAGGAG
JMFS047C02+ TTCAACAGTACCGATCATAGTCATTTTGAGGGAGGCTTTGATGGGAATCTGAGAGAGGAG
____________________________________________________________
consensus TTCAACAGTACCGATCATAGTCATTTTGAGGGAGGCTTTGATGGGAATCTGAGAGAGGAG
. : . : . : . : . : . :
JMFF048C19+ GAGGCAATCATCGGCAAGTTTGGAGCCGACTTTGGGGTAGAGAAGCTTCTGGCGCTTTGG
JMFF026C01+ GAGGCAATCATCGGCAAGTTNGGAGCCGACTTTGGGGTAGAGAAGCTTCTGGCGCTTTGG
JMSF017J24+ GAGGCAATCATCGGCAAGTTTGGAGCCGACTTTGGGGTAGAGAAGCTTCTGGCGCTTTGG
JMFS047C02+ GAGGCAATCATCGGCAAGTTTGGAGCCGACTTTGGGGTAGAGAAGCTTCTGGCGCTTTGG
____________________________________________________________
consensus GAGGCAATCATCGGCAAGTTTGGAGCCGACTTTGGGGTAGAGAAGCTTCTGGCGCTTTGG
. : . : . : . : . : . :
JMFF048C19+ AAGCACGTTTGTGACTTCACATATGCGTCGCTTCAGCTCGCCGACGGTGTCGCTGCCGCA
JMFF026C01+ AAGCACGTTTGTGACTTCACATATGCGTCGCTTCAGCTCGCCGACGGTGTCGCTGCCGCA
JMSF017J24+ AAGCACGTTTGTGACTTCACATATGCGTCGCTTCAGCTCGCCGACGGTGTCGCTGCCGCA
JMFS047C02+ AAGCACGTTTGTGACTTCACATATGCGTCGCTTCAGCTCGCCGACGGTGTCGCTGCCGCA
____________________________________________________________
consensus AAGCACGTTTGTGACTTCACATATGCGTCGCTTCAGCTCGCCGACGGTGTCGCTGCCGCA
. : . : . : . : . : . :
JMFF048C19+ TACTCTGACGGTGTACTCTTTGCCGGTCCATTTCACCGTCAGCGTCAGCTCCTCCTCCGT
JMFF026C01+ TACTCTGACGGTGTACTCTTTGCCGGTCCATTTCACCGTCAGCGTCAGCTCCTCCTCCGT
JMSF017J24+ TACTCTGACGGTGTACTCTTTGCCGGTCCATTTCACCGTCAGCGTCAGCTCCTCCTCCGT
JMFS047C02+ TACTCTGACGGTGTACTCTTTGCCGGTCCATTTCACCGTCAGCGTCAGCTCCTCCTCCGT
____________________________________________________________
consensus TACTCTGACGGTGTACTCTTTGCCGGTCCATTTCACCGTCAGCGTCAGCTCCTCCTCCGT
. : . : . : . : . : . :
JMFF048C19+ CAACGGGGACGTCGCCAGTGCCGCCACCGAGGAAGATGCTTCCGCGGCCATTTGGA
JMFF026C01+ CAACGGGGACGTCGCCAGTGCCGCCACCGAGGAAGATGCTTCCGCGGCCATTTGGA
JMSF017J24+ CAACGGGGACGTCGCCAGTGCCGCCACCGAGGAAGATGCTTCCGCGGCCATTTGGATAGT
JMFS047C02+ CAACGGGGACGTCGCCAGTGCCGCCACCGAGGAAGATGCTTCCGCGGCCATTTGGATAGT
____________________________________________________________
consensus CAACGGGGACGTCGCCAGTGCCGCCACCGAGGAAGATGCTTCCGCGGCCATTTGGATAGT
. : . : . : . : . : . :
JMSF017J24+ GGTAGTGAAGTCGCGACTGTGTCGTGTGTTAAGACGAAAAGATGCC
JMFS047C02+ GGTAGTGAAGTCGCGACTGTGTCGTGTGTTAAGACGAAAAGATGCCCGTCTTACTGCGAG
____________________________________________________________
consensus GGTAGTGAAGTCGCGACTGTGTCGTGTGTTAAGACGAAAAGATGCCCGTCTTACTGCGAG