Contig 006220: Sequence
BLAST Hits against nr-aa DB Show
Alignment
This contig is upended
. : . : . : . : . : . :
rJMFF045H09- GCATT
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consensus GCATT
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rJMFF045H09- ATATTTATTTATTATTATATCATTTGCAAAGAACAACCATTCCAAGCACAAATGGTTGAA
rJMSF041P23- ACAACCATTCCAAGCACAAATGGTTGAA
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consensus ATATTTATTTATTATTATATCATTTGCAAAGAACAACCATTCCAAGCACAAATGGTTGAA
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rJMFF045H09- ACCCTTACTTAAACAGACCCTATAATAAACCCCTATTTTATATATCAAATGCAGCAAACA
rJMSF041P23- ACACTTACTTAAACAGACACTATAATAAACACCTATATTATATATCAAATGCAGCAGACA
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consensus ACCCTTACTTAAACAGACCCTATAATAAACCCCTATTTTATATATCAAATGCAGCAGACA
. : . : . : . : . : . :
rJMFF045H09- AGTTTGATAGGGGATATACTATAATAAAAAGATAGGAGCTTTATGAATATGAAATAAAAA
rJMSF041P23- AGTTTGATAGGGGATATACTATAATAGAAAGATAGGAGCTTTATGAATATGAAATAAGAA
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consensus AGTTTGATAGGGGATATACTATAATAGAAAGATAGGAGCTTTATGAATATGAAATAAGAA
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rJMFF045H09- GCTTCTCCAGCAAGCTTTCAAGGAAATTGGGGCCAATCATATCCACTATTGAGGGTATTC
rJMSF041P23- GCTTCTCCAGCAAGCTTTCAAGGAGATTGGGGCCAATCATATCCACTATTGATGGTATTC
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consensus GCTTCTCCAGCAAGCTTTCAAGGAGATTGGGGCCAATCATATCCACTATTGATGGTATTC
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rJMFF045H09- ACCCCATCAAAAAACCACATTTGCACATCCTCAACACCTTCTTCATCCTCCCACACCCCA
rJMSF041P23- AGCCCATCATAAAACCACATTTGCACATCCTCAACACCTTCTTCATCCTCCCACACCCCA
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consensus AGCCCATCATAAAACCACATTTGCACATCCTCAACACCTTCTTCATCCTCCCACACCCCA
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rJMFF045H09- TCCAATATATCAAACTCGTCATCCAAATCCCCGGCAACAAAGTCCCACGGCAGGTACCCA
rJMSF041P23- TCCGATATATCATACTCGTCATCCAAATCCCCGGCAACGAAGTCCCACGGCAGGTACACA
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consensus TCCGATATATCATACTCGTCATCCAAATCCCCGGCAACGAAGTCCCACGGCAGGTACCCA
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rJMFF045H09- AACGACCCGGAATTATCAAAGCAATTTTCCCATGCTTGCGGATCATAGCGGTCAAAAACG
rJMSF041P23- GACGACCCGGAATTATCAGAGCAATTTTCCCATGCTTGCGGATCATAGCGGTCGAAAACG
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consensus GACGACCCGGAATTATCAGAGCAATTTTCCCATGCTTGCGGATCATAGCGGTCGAAAACG
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rJMFF045H09- ACCGGTCCAACAACCTTCAATCCCAAATTCTTCTTCACGCTCTCGTCAATGCTAACTCCC
rJMSF041P23- ACCGGTCCAACGACCTTCAATCCCGAATTCTTCTTCACGCTCTCGTCGATGCTAACTCCC
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consensus ACCGGTCCAACGACCTTCAATCCCGAATTCTTCTTCACGCTCTCGTCGATGCTAACTCCC
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rJMFF045H09- CAGCATCCCC
rJMSF041P23- CAGCATCCCCGAATGTCCAGTACTTCGAGCTCGGTGCAACTCTTGACTATCTCGTTCACG
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consensus CAGCATCCCCGAATGTCCAGTACTTCGAGCTCGGTGCAACTCTTGACTATCTCGTTCACG
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rJMSF041P23- CTTTCTGAAGTGACGAGCATGTACCCAATCTCGAGCTGCTTGAGCTTCGGCATCGTGGCG
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consensus CTTTCTGAAGTGACGAGCATGTACCCAATCTCGAGCTGCTTGAGCTTCGGCATCGTGGCG
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rJMSF041P23- GCAATCGCGTACGCTTCGTCGTCCTGGTCGCCCTTGTCGATGACCTCTAGGGGGTGCATT
JMSF041P23+ GTGCATT
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consensus GCAATCGCGTACGCTTCGTCGTCCTGGTCGCCCTTGTCGATGACCTCTAGGGGGTGCATT
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rJMSF041P23- GTTCGGCGGAGGAAAGTGAGATTCTTGCAATGCTTCCCGAACGCTTCGATCGCTCCCACC
JMSF041P23+ GTTCGGCGGAGGAAAGTGAGATTCTTGCAATGCTTCCCGAACGCTTCGATCGCTCCCACC
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consensus GTTCGGCGGAGGAAAGTGAGATTCTTGCAATGCTTCCCGAACGCTTCGATCGCTCCCACC
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rJMSF041P23- CCCATATCGATGCAGTAGCTTATATCCNAGAACGTAACGTTACTGAACTTCCCGGCTAAC
JMSF041P23+ CCCATATCGATGCAGTAGCTTATATCCAAGAACGTAACGTTACTGAACTTCCCGGCTAAC
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consensus CCCATATCGATGCAGTAGCTTATATCCAAGAACGTAACGTTACTGAACTTCCCGGCTAAC
. : . : . : . : . : . :
rJMSF041P23- TGGTCCACGACGGG
JMSF041P23+ TGTTCCACGACGGGATCGCTGATTTCACACCTCGTCAGGTGCAATGCCTGCAGATATTTG
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consensus TGTTCCACGACGGGATCGCTGATTTCACACCTCGTCAGGTGCAATGCCTGCAGATATTTG
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JMSF041P23+ GCATTGTCCGCGATTAATTCAAAGGTTTCTTTACTAGAGACACCAGAAACCGCGAGCTTA
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consensus GCATTGTCCGCGATTAATTCAAAGGTTTCTTTACTAGAGACACCAGAAACCGCGAGCTTA
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JMSF041P23+ CGGATTGAACCCTGAGACCTCGTAATCAGCAACTGAAGCAAGCGGTCCACAGTTCCAAAG
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consensus CGGATTGAACCCTGAGACCTCGTAATCAGCAACTGAAGCAAGCGGTCCACAGTTCCAAAG
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JMSF041P23+ CGGGAGCTCATGCTCCATTCCTCAATGTCTATCTCTTGCCAACAATAAGGCCCCAGCACG
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consensus CGGGAGCTCATGCTCCATTCCTCAATGTCTATCTCTTGCCAACAATAAGGCCCCAGCACG
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JMSF041P23+ GCTCTTTGCCACGACTTGCAAACCCTCGGGATGACAGTAAGCACATCCTGAAGCGGCAGA
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consensus GCTCTTTGCCACGACTTGCAAACCCTCGGGATGACAGTAAGCACATCCTGAAGCGGCAGA
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JMSF041P23+ TTCTTGAAGATCAACCCAAGAGCATCCGGTATTAACTCATCCCAGCACCGATCATTGCCA
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consensus TTCTTGAAGATCAACCCAAGAGCATCCGGTATTAACTCATCCCAGCACCGATCATTGCCA
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JMSF041P23+ CCATCCTCCATTTTAGCTTCTAACTCTCAAGAAACCGCAAAATCTTTAAGGCAACTCAGT
JMFS042D12+ CAAGAAACCGCAAAATCTTTAAGGCAACTCAGT
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consensus CCATCCTCCATTTTAGCTTCTAACTCTCAAGAAACCGCAAAATCTTTAAGGCAACTCAGT
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JMSF041P23+ TCGATTAGTAAAAATACCCAGCAATTCCAGCCATTTTAGTTCATCCCAAGAAATGCAGAA
JMFS042D12+ TCGATTAGTAAAAATACCCAGCAATTCCAGCCATTTTAGTTCATCCCAAGAAATGCAGAA
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consensus TCGATTAGTAAAAATACCCAGCAATTCCAGCCATTTTAGTTCATCCCAAGAAATGCAGAA
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JMSF041P23+ CAAGTGCTTTCAGAGTTTAAC
JMFS042D12+ CAAGTGCTTTCAGAGTTTAACGTTGGGCGTTGGGGAGACGGGAGGCGTTGGGCGGTGGGA
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consensus CAAGTGCTTTCAGAGTTTAACGTTGGGCGTTGGGGAGACGGGAGGCGTTGGGCGGTGGGA
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JMFS042D12+ GAGGGACCCCCGGAGGCCGAAGGGTGGGGAGCGGAGAAAAGAAACCACTCAAAACCCGGA
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consensus GAGGGACCCCCGGAGGCCGAAGGGTGGGGAGCGGAGAAAAGAAACCACTCAAAACCCGGA
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JMFS042D12+ GAAACAGAAGCTATAAAAGCAAAAAAGATAGGATTTTGTTGCAGAAAAAACAAGAAAAAG
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consensus GAAACAGAAGCTATAAAAGCAAAAAAGATAGGATTTTGTTGCAGAAAAAACAAGAAAAAG
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JMFS042D12+ AGGCGTGTATGGTTACAAAAGCTCACCAAAAATTATCTGCTTTCATAAACGAACCAAATT
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consensus AGGCGTGTATGGTTACAAAAGCTCACCAAAAATTATCTGCTTTCATAAACGAACCAAATT
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JMFS042D12+ CATCTTCTCCATTAGAGAGATCTGTATCACTGTATATATATGCAATGCTCTGGAGACTGT
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consensus CATCTTCTCCATTAGAGAGATCTGTATCACTGTATATATATGCAATGCTCTGGAGACTGT
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JMFS042D12+ TCTACCTCCATTGCTGGGCTGATGTGTTTCTTCATAGATTTCTTGAATCTTTATATATAT
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consensus TCTACCTCCATTGCTGGGCTGATGTGTTTCTTCATAGATTTCTTGAATCTTTATATATAT
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JMFS042D12+ AGAAATCTTGAAATTTCGGAAAAATCTCCTATTTGGCTATTTCACACTAGTATGGTTTAT
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consensus AGAAATCTTGAAATTTCGGAAAAATCTCCTATTTGGCTATTTCACACTAGTATGGTTTAT