| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS011A11 | Sequence | 544 | 006217 (9) | ref|XP_009781763.1| | 190 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | |||||
| JMFS012B09 | Sequence | 630 | 006217 (9) | ref|XP_009781763.1| | 219 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | |||||
| JMFS040G02 | Sequence | 624 | 006217 (9) | ref|XP_009781763.1| | 85.9 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | |||||
| JMFS058C07 | Sequence | 627 | 006217 (9) | ref|XP_009781763.1| | 211 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | |||||
| JMFS068D08 | Sequence | 630 | 006217 (9) | ref|XP_009781763.1| | 133 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | |||||
| JMFS162F09 | Sequence | 613 | 006217 (9) | ref|XP_009781763.1| | 111 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | |||||
| JMSF002C12 | Sequence | 347 | 006217 (9) | ref|XP_009781763.1| | 73.2 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | 737 | 007067 (3) | ref|XP_006349551.1| | 375 | PREDICTED: uncharacterized protein LOC102592127 [Solanum tuberosum] |
| JMSF013B18 | Sequence | 221 | 006217 (9) | 803 | 007067 (3) | ref|XP_009781763.1| | 322 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | |||
| JMSF048B20 | Sequence | 709 | 006217 (9) | ref|XP_009781763.1| | 166 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] | 751 | 007067 (3) | ref|XP_009781763.1| | 349 | PREDICTED: uncharacterized protein LOC104230606 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFS012B09+ TCACCACTGAAACCATGAAAGCAGCGACATTGACCCAGCTCATGATTGCAAAC
JMFS011A11+ TCATGATTGCAAAC
JMFS058C07+ ATGAAAGCAGCGACATTGACCCAGCTCATGATTGCAAAC
____________________________________________________________
consensus TCACCACTGAAACCATGAAAGCAGCGACATTGACCCAGCTCATGATTGCAAAC
. : . : . : . : . : . :
JMFS012B09+ GCCTTGACTGCTGCAATTATTTTTGCAGCTCTTGCTGCCAATTTGCTCAACTATTTTCAC
JMSF048B20+ TGCCAATTTGCTCAACTATTTTCAC
JMFS011A11+ GCCTTGACTGCTGCAATTATTTTTGCAGCTCTTGCTGCCAATTTGCTCAACTATTTTCAC
JMFS058C07+ GCCTTGACTGCTGCAATTATTTTTGCAGCTCTTGCTGCCAATTTGCTCAACTATTTTCAC
____________________________________________________________
consensus GCCTTGACTGCTGCAATTATTTTTGCAGCTCTTGCTGCCAATTTGCTCAACTATTTTCAC
. : . : . : . : . : . :
JMFS012B09+ TGATGCATTTCTTGCATCGCAACCAGCTAACCACCGGCCAATTCCAGCCTTCCATGGAGC
JMSF048B20+ TGATGCATTTCTTGCATCGCAACCAGCTAACCACCGGCCAATTCCAGCCTTCCATGGAGC
JMFS011A11+ TGATGCATTTCTTGCATCGCAACCAGCTAACCACCGGCCAATTCCAGCCTTCCATGGAGC
JMFS068D08+ TTCCAGCCTTCCATGGAGC
JMFS058C07+ TGATGCATTTCTTGCATCGCAACCAGCTAACCACCGGCCAATTCCAGCCTTCCATGGAGC
____________________________________________________________
consensus TGATGCATTTCTTGCATCGCAACCAGCTAACCACCGGCCAATTCCAGCCTTCCATGGAGC
. : . : . : . : . : . :
JMFS012B09+ ACCACGGTAGACCACAGCATTATGTAAATCTTCAGGAAATTCTGCATTCAAATCAAGCAT
JMSF048B20+ ACCACGGTAGACCACAGCATTATGTAAATCTTCAGGAAATTCTGCATTCAAATCAAGCAT
JMFS011A11+ ACCACGGTAGACCACAGCATTATGTAAATCTTCAGGAAATTCTGCATTCAAATCAAGCAT
JMFS068D08+ ACCACGGTAGACCACAGCATTATGTAAATCTTCAGGAAATTCTGCATTCAAATCAAGCAT
JMFS162F09+ AGCATTATGTAAATCTTCAGGAAATTCTGCATTCAAATCAAGCAT
JMFS058C07+ ACCACGGTAGACCACAGCATTATGTAAATCTTCAGGAAATTCTGCATTCAAATCAAGCAT
____________________________________________________________
consensus ACCACGGTAGACCACAGCATTATGTAAATCTTCAGGAAATTCTGCATTCAAATCAAGCAT
. : . : . : . : . : . :
JMFS012B09+ AGGAGGCGGGCTTCCTTTAGATGTCTCGTTGACTAGTGTCACATACATTCTATCTTCGAT
JMSF048B20+ AGGAGGCGGGCTTCCTTTAGATGTCTCGTTGACTAGTGTCACATACATTCTATCTTCGAT
JMFS011A11+ AGGAGGCGGGCTTCCTTTAGATGTCTCGTTGACTAGTGTCACATACATTCTATCTTCGAT
JMFS068D08+ AGGAGGCGGGCTTCCTTTAGATGTCTCGTTGACTAGTGTCACATACATTCTATCTTCGAT
JMFS162F09+ AGGAGGCGGGCTTCCTTTAGATGTCTCGTTGACTAGTGTCACATACATTCTATCTTCGAT
JMFS058C07+ AGGAGGCGGGCTTCCTTTAGATGTCTCGTTGACTAGTGTCACATACATTCTATCTTCGAT
____________________________________________________________
consensus AGGAGGCGGGCTTCCTTTAGATGTCTCGTTGACTAGTGTCACATACATTCTATCTTCGAT
. : . : . : . : . : . :
JMFS012B09+ TGTCTTGTTATCTCGGGAAGCCCTATTACCTACTGCACTTGACCCATTAATTGGGAGACA
JMSF048B20+ TGTCTTGTTATCTCGGGAAGCCCTATTACCTACTGCACTTGACCCATTAATTGGGAGACA
JMFS011A11+ TGTCTTGTTATCTCGGGAAGCCCTATTACCTACTGCACTTGACCCATTAATTGGGAGACA
JMFS068D08+ TGTCTTGTTATCTCGGGAAGCCCTATTACCTACTGCACTTGACCCATTAATTGGGAGACA
JMFS162F09+ TGTCTTGTTATCTCGGGAAGCCCTATTACCTACTGCACTTGACCCATTAATTGGGAGACA
JMSF002C12+ TACTGCACTTGACCCATTAATTGGGAGACA
JMFS058C07+ TGTCTTGTTATCTCGGGAAGCCCTATTACCTACTGCACTTGACCCATTAATTGGGAGACA
JMFS040G02+ TGGGAGACA
____________________________________________________________
consensus TGTCTTGTTATCTCGGGAAGCCCTATTACCTACTGCACTTGACCCATTAATTGGGAGACA
. : . : . : . : . : . :
JMFS012B09+ AGAATTTTGAAA-GGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
JMSF048B20+ AGAATTTTGAAA-GGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
JMFS011A11+ AGAATTTTGAAA-GGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
JMFS068D08+ AGAATTTTGAAA-GGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
JMFS162F09+ AGAATTTTGAAA-GGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
JMSF002C12+ NGNATTTTGAAAGGGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
JMFS058C07+ AGAATTTTGAAA-GGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
JMFS040G02+ AGAATTTTGAAA-GGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
____________________________________________________________
consensus AGAATTTTGAAA-GGACCGTGTACTAAAATAGTCCAGAGAAGGAACCACAGGGTACAGGA
. : . : . : . : . : . :
JMFS012B09+ ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
JMSF048B20+ ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
JMFS011A11+ ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
JMFS068D08+ ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
JMFS162F09+ ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
JMSF002C12+ ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
JMSF013B18+ ACTAGGGACCATG
JMFS058C07+ ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
JMFS040G02+ ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
____________________________________________________________
consensus ATAAGTGAATAACTGAAACCAAGATCACAAATGAAGCACCACTTGCCACTAGGGACCATG
. : . : . : . : . : . :
JMFS012B09+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
JMSF048B20+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
JMFS011A11+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
JMFS068D08+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
JMFS162F09+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
JMSF002C12+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
JMSF013B18+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
JMFS058C07+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
JMFS040G02+ AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
____________________________________________________________
consensus AACATCTTTTTTGGAAAGAGAACATGATACACCAAATTACTAACTTCCACTTTTAACTTG
. : . : . : . : . : . :
JMFS012B09+ TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
JMSF048B20+ TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
JMFS011A11+ TCTCAAACCAAGTTCTTAATATGCATTA
JMFS068D08+ TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
JMFS162F09+ TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
JMSF002C12+ TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
JMSF013B18+ TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
JMFS058C07+ TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
JMFS040G02+ TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
____________________________________________________________
consensus TCTCAAACCAAGTTCTTAATTTGCATTAACCCTTTTCAACTCATGGTTCTTGGGCCACTA
. : . : . : . : . : . :
JMFS012B09+ GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCA
JMSF048B20+ GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCACAATTCCT
JMFS068D08+ GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCACAATTCCT
JMFS162F09+ GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCACAATTCCT
JMSF002C12+ GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCACAATTCC
JMSF013B18+ GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCACAATTCCT
JMFS058C07+ GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCACAATTCCTATT
JMFS040G02+ GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCACAATTCCTATTGAAATGCAGCT
____________________________________________________________
consensus GCTGTAAATCAACCGCTTTGTCGACCTTCCCAAATTCACAATTCCTATTGAAATGCAGCT
. : . : . : . : . : . :
JMFS040G02+ GACACTCTGTTGTCGAACTGGTCCCATAAAAAAATATATATTACATAATAAATACATGTA
____________________________________________________________
consensus GACACTCTGTTGTCGAACTGGTCCCATAAAAAAATATATATTACATAATAAATACATGTA
. : . : . : . : . : . :
JMFS040G02+ TGCCTATACATCCATTCCATGCATGTGCACACAACAAAAGTCACAATCTTTAAATAGAAG
____________________________________________________________
consensus TGCCTATACATCCATTCCATGCATGTGCACACAACAAAAGTCACAATCTTTAAATAGAAG
. : . : . : . : . : . :
JMFS040G02+ CCGCCAAGGTTTTAAGCTGGAATATGGAATTGAACCAACTGAAGACTTGAACAGTGAAGA
____________________________________________________________
consensus CCGCCAAGGTTTTAAGCTGGAATATGGAATTGAACCAACTGAAGACTTGAACAGTGAAGA
. : . : . : . : . : . :
JMFS040G02+ TGGTTGCCGTTAGAATGACAGAGAAATGCCCTTGCTGAAGGGTAGATTGGGCAATTTGAG
____________________________________________________________
consensus TGGTTGCCGTTAGAATGACAGAGAAATGCCCTTGCTGAAGGGTAGATTGGGCAATTTGAG
. : . : . : . : . : . :
JMFS040G02+ AAATCTCTTGTAGATTTTTGTAATGACCCGCAAGGTTCTTCATTCTGGATTCTGGAAATC
____________________________________________________________
consensus AAATCTCTTGTAGATTTTTGTAATGACCCGCAAGGTTCTTCATTCTGGATTCTGGAAATC