Contig 006208:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS031G01Sequence548006208 (3)ref|XP_006351094.1|1e-32PREDICTED: cucumisin-like [Solanum tuberosum]
JMFS041D11Sequence516006208 (3)ref|XP_006358675.1|1e-18PREDICTED: xylem serine proteinase 1-like [Solanum tuberosum]
JMFS041E11Sequence423006208 (3)ref|XP_006351094.1|5e-18PREDICTED: cucumisin-like [Solanum tuberosum]

Alignment

This contig is upended


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JMFS031G01+                                                               GAAATACC
                      ____________________________________________________________
consensus                                                                 GAAATACC
 
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JMFS041D11+                                          CCCTTGTTGGTTTTACGCAGAAGCTATCC
JMFS031G01+           AGAATTTACAACCCCCACGATCATCCCATCTCCCTTGTTGGTTTTACGCAGGAGCTCTCC
                      ____________________________________________________________
consensus             AGAATTTACAACCCCCACGATCATCCCATCTCCCTTGTTGGTTTTACGCAGGAGCTCTCC
 
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JMFS041D11+           GGGAACATTTGCACCCTCTGATAGCCCCAGTTAATCCCAGCTCCGGTAAGTTTGAACCTT
JMFS041E11+                                                          AAGTTTGAGCCTT
JMFS031G01+           GGGAACATTTGCACCCTCCGATAGCCCCAGGAAATCCCAGCTCCGGGAAGTTTGAACCTT
                      ____________________________________________________________
consensus             GGGAACATTTGCACCCTCTGATAGCCCCAGTTAATCCCAGCTCCGGTAAGTTTGAACCTT
 
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JMFS041D11+           GTGGTGTTTATCGTCCACCACGCTAACCACCCCAGCTACCCCGGCGACTTTCTTCGCCTG
JMFS041E11+           GTGGTGTTTATCCTCCACCACGCTAACCACCCCAGATACCCCGGCGACGTTATTAGCATG
JMFS031G01+           GTGGTGTTTATCCTCCACCACGCTAACCACCCCAGCTACCCCGGCGACCTTCTTCGCCTG
                      ____________________________________________________________
consensus             GTGGTGTTTATCCTCCACCACGCTAACCACCCCAGCTACCCCGGCGACTTTCTTCGCCTG
 
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JMFS041D11+           AGACGCAGTCAGCACCGCCGCAAATCCAGAAAACCCATATCTATAAATATACACCATCGC
JMFS041E11+           AGACGCCGTCAGCACCGCCGCAAATCCAGAAAACCCATATCTATAACTATACACCATCGC
JMFS031G01+           AGACGCCGTCAGCACCGCCGCAAATCCAGAAAACCCATATCTATAACTATACACCATCGC
                      ____________________________________________________________
consensus             AGACGCCGTCAGCACCGCCGCAAATCCAGAAAACCCATATCTATAACTATACACCATCGC
 
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JMFS041D11+           ATTCCTAGCTTGTTCATGACTCCCGACCACCCCGGCGAGCAAGTAGTAATGCGACTCTTT
JMFS041E11+           CTTCCTAGCTTCTTCATGACTCCCGACCACCCCGGCGAGCAAGTCGTAATGCGACTCTTT
JMFS031G01+           CTTCCTAGCTTCTTCATGACTCCCGACCACCCCGGCGAGCAAGTCGTAATGCGACTCTTT
                      ____________________________________________________________
consensus             CTTCCTAGCTTCTTCATGACTCCCGACCACCCCGGCGAGCAAGTCGTAATGCGACTCTTT
 
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JMFS041D11+           GATCCGCCTGTGATCATCGTGAGGCTTCCCGCCGAGATACACGATGTAAATCTTTTTGCC
JMFS041E11+           GATCCGCCTGTGATCATCGTGAGGCTTCCCGCCGAGATACACGATGTAAATCTTTTTGCC
JMFS031G01+           GATCCGCCTGTGATCATCGTGAGGCTTCCCGCCGAGATACACGATGTAAATCTTTTTGCC
                      ____________________________________________________________
consensus             GATCCGCCTGTGATCATCGTGAGGCTTCCCGCCGAGATACACGATGTAAATCTTTTTGCC
 
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JMFS041D11+           GTTCTCTTTCAATACCTTTGCATTTGTGCCCACGCTCCGGCAATGGCCATTAACGAAGAT
JMFS041E11+           GTTCTCTTTCAATACCTTTGCATTTGTGCCCACGCTCCGGCAATGGCCATTAACGAAGAT
JMFS031G01+           GTTCTCTTTCAATACCTTTGCATTTGTGCCCACGCTCCGGCAATGGCCATTAACGAAGAT
                      ____________________________________________________________
consensus             GTTCTCTTTCAATACCTTTGCATTTGTGCCCACGCTCCGGCAATGGCCATTAACGAAGAT
 
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JMFS041D11+           GAGGGAAAGGAAGAAAATTACAGATAAAAATGGGGTTGGTTTATACATTATTCCTCTTTG
JMFS041E11+           GAGGGAAAGGAAGAAAATTCCAGATAAAAATGGGGTTGGCTTATACATTATTCCTCTTTC
JMFS031G01+           GAGGGAAAGGAAGAAAATTACAGATAAAAATGGGGTTGGCTTATACATTATTCCTCTTTC
                      ____________________________________________________________
consensus             GAGGGAAAGGAAGAAAATTACAGATAAAAATGGGGTTGGCTTATACATTATTCCTCTTTC
 
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JMFS041D11+           TCTTATATGATCCTCCTGCCCAATACGTGCAGACAGAGATCAGAGAAAAG          
JMFS041E11+           TCTTCTCTGATCCTCCTGCCCAATACGTGCAGACAGAGATCAGAGAAAAG          
JMFS031G01+           TCTTCTCTGATCCTCCTGCCCAATACGTGCAGACAGAGATCAGAGAAAAGGATTAATGCT
                      ____________________________________________________________
consensus             TCTTCTCTGATCCTCCTGCCCAATACGTGCAGACAGAGATCAGAGAAAAGGATTAATGCT