| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF030L11 | Sequence | 608 | 012010 (6) | ref|XP_011081286.1| | 2e-91 | PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Sesamum indicum] | 757 | 006204 (7) | emb|CDP09995.1| | 7e-107 | unnamed protein product [Coffea canephora] |
| JMFF033I14 | Sequence | 477 | 012010 (6) | ref|XP_009785488.1| | 2e-57 | PREDICTED: peroxisomal acyl-coenzyme A oxidase 1 [Nicotiana sylvestris] | 810 | 006204 (7) | emb|CDP09995.1| | 2e-114 | unnamed protein product [Coffea canephora] |
| JMFS025F08 | Sequence | 603 | 006204 (7) | emb|CDP09995.1| | 1e-66 | unnamed protein product [Coffea canephora] | |||||
| JMFS169G10 | Sequence | 563 | 006204 (7) | emb|CDP09995.1| | 7e-66 | unnamed protein product [Coffea canephora] | |||||
| JMSF014D17 | Sequence | 481 | 012010 (6) | emb|CDP09995.1| | 5e-48 | unnamed protein product [Coffea canephora] | 759 | 006204 (7) | emb|CDP09995.1| | 8e-116 | unnamed protein product [Coffea canephora] |
| JMSF023G21 | Sequence | 695 | 012010 (6) | ref|XP_011081286.1| | 1e-97 | PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Sesamum indicum] | 765 | 006204 (7) | emb|CDP09995.1| | 8e-86 | unnamed protein product [Coffea canephora] |
| JMSF034N01 | Sequence | 678 | 012010 (6) | ref|XP_011081286.1| | 4e-108 | PREDICTED: peroxisomal acyl-coenzyme A oxidase 1-like [Sesamum indicum] | 707 | 006204 (7) | emb|CDP09995.1| | 2e-100 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF014D17+ ACTACAGCTTATATGGGAAG
rJMFF033I14+ GAACTACAGCTTATATGGGAAG
____________________________________________________________
consensus GAACTACAGCTTATATGGGAAG
. : . : . : . : . : . :
rJMSF014D17+ ACTGCAACAACTGCTGCAATGTCGTTCTAATGTTCAGCAAGCAAAGGATTGGATGAACCC
rJMFF033I14+ ACTGCAACAACTGCTGCAATGTCGTTCTAATGTTCAGCAAGCAAAGGATTGGATGAACCN
____________________________________________________________
consensus ACTGCAACAACTGCTGCAATGTCGTTCTAATGTTCAGCAAGCAAAGGATTGGATGAACCC
. : . : . : . : . : . :
rJMSF014D17+ TAGTGCAGTATTGGAGGCTTACGAAGCAAGAGCTGCGAGAATGATCGCTTCTTGTGCTAA
rJMSF034N01+ TAGTGCAGTATTGGAGGCTTACGAAGCAAGAGCTGCGAGAATGATCGCTTCTTGTGCTAA
rJMFF033I14+ TAGTGCAGTATTGGAGGCTTACGAAGCAAGAGCTGCGAGAATGATCGCTTCTTGTGCTAA
____________________________________________________________
consensus TAGTGCAGTATTGGAGGCTTACGAAGCAAGAGCTGCGAGAATGATCGCTTCTTGTGCTAA
. : . : . : . : . : . :
rJMSF014D17+ AAACCTAAACAACTTTGCTAGCTCTGAAGACGGCTTTGCAGAATTATCTTCGGATTTAGT
rJMSF034N01+ AAACCTAAACAACTTTGCTAGCTCTGAAGACGGCTTTGCAGAATTATCTTCGGATTTAGT
rJMSF023G21+ GGCTTTGCAGAATTATCTTCGGATTTAGT
rJMFF030L11+ GGCTTTGCAGAATTATCTTCGGATTTAGT
rJMFF033I14+ AAACCTAAACAACTTTGCTAGCTCTGAAGACGGCTTTGCAGAATTATCTTCGGATTTAGT
____________________________________________________________
consensus AAACCTAAACAACTTTGCTAGCTCTGAAGACGGCTTTGCAGAATTATCTTCGGATTTAGT
. : . : . : . : . : . :
rJMSF014D17+ TGAAGCAGCAGTCGCTCATTGCCAAGTGATCGTCGTTTCCAAGTTTATCGAAAAGCTGAA
rJMSF034N01+ TGAAGCAGCAGTCGCTCATTGCCAAGTGATCGTCGTTTCCAAGTTTATCGAAAAGCTGAA
rJMSF023G21+ TGAAGCAGCAGTCGCTCATTGCCAAGTGATCGTCGTTTCCAAGTTTATCGAAAAGCTGAA
rJMFF030L11+ TGAAGCAGCAGTCGCTCATTGCCAAGTGATCGTCGTTTCCAAGTTTATCGAAAAGCTGAA
rJMFF033I14+ TGAAGCAGCAGTCGCTCATTGCCAAGTGATCGTCGTTTCCAAGTTTATCGAAAAGCTGAA
JMFS025F08+ GAA
____________________________________________________________
consensus TGAAGCAGCAGTCGCTCATTGCCAAGTGATCGTCGTTTCCAAGTTTATCGAAAAGCTGAA
. : . : . : . : . : . :
rJMSF014D17+ GCAGGATATTCCGGGGAATGGCGTGAAGCAGCAGTTGGAGAATCTTTTCGGGATCTACTC
rJMSF034N01+ GCAGGATATTCCGGGGAATGGCGTGAAGCAGCAGTTGGAGAATCTTTTCGGGATCTACTC
rJMSF023G21+ GCAGGATATTCCGGGGAATGGCGTGAAGCAGCAGTTGGAGAATCTTTTCGGGATCTACTC
rJMFF030L11+ GCAGGATATTCCGGGGAATGGCGTGAAGCAGCAGTTGGAGAATCTTTTCGGGATCTACTC
rJMFF033I14+ GCAGGATATTCCGGGGAATGGCGTGAAGCAGCAGTTGGAGAATCTTTTCGGGATCTACTC
JMFS169G10- AGGATATTCCGGGGAATGGCGTGAAGCAGCAGTTGGAGAATCTTTTCGGGATCTACTC
JMFS025F08+ GCAGGATATTCCGGGGAATGGCGTGAAGCAGCAGTTGGAGAATCTTTTCGGGATCTACTC
____________________________________________________________
consensus GCAGGATATTCCGGGGAATGGCGTGAAGCAGCAGTTGGAGAATCTTTTCGGGATCTACTC
. : . : . : . : . : . :
rJMSF014D17+ GCTCTACCTCATCCACAAACACCAAGGAGACTTCCTCTCCACCGGCTGCATCACCCCGAA
rJMSF034N01+ GCTCTACCTCATCCACAAACACCAAGGAGACTTCCTCTCCACCGGCTGCATCACCCCGAA
rJMSF023G21+ GCTCTACCTCATCCACAAACACCAAGGAGACTTCCTCTCCACCGGCTGCATCACCCCGAA
rJMFF030L11+ GCTCTACCTCATCCACAAACACCAAGGAGACTTCCTCTCCACCGGCTGCATCACCCCGAA
rJMFF033I14+ GCTCTACCTCATCCACAAACACCAAGGAGACTTCCTCTCCACCGGCTGCATCACCCCGAA
JMFS169G10- GCTCTACCTCATCCACAAACACCAAGGAGACTTCCTCTCCACCGGCTGCATCACCCCGAA
JMFS025F08+ GCTNTACCTCATCCACAAACACCAAGGAGACTTCCTCTCCACCGGCTGCATCACCCCGAA
____________________________________________________________
consensus GCTCTACCTCATCCACAAACACCAAGGAGACTTCCTCTCCACCGGCTGCATCACCCCGAA
. : . : . : . : . : . :
rJMSF014D17+ GCAGGCCTCGCTCGCAAACGACCAGCTGAGGGCCCTGTACACTTTGGTACGTCCCAACGC
rJMSF034N01+ GCAGGCCTCGCTCGCAAACGACCAGCTGAGGGCCCTGTACACTTTGGTACGTCCCAACGC
rJMSF023G21+ GCAGGCCTCGCTCGCAAACGACCAGCTGAGGGCCCTGTACACTTTGGTACGTCCCAACGC
rJMFF030L11+ GCAGGCCTCGCTCGCAAACGACCAGCTGAGGGCCCTGTACACTTTGGTACGTCCCAACGC
rJMFF033I14+ GCAGGCCTCGCTCGCAAACGACCAGCTGAGGGCCCTGTACACTTTGGTACGTCCCAACGC
JMFS169G10- GCAGGCCTCGCTCGCAAACGACCAGCTGAGGGCCCTGTACACTTTGGTACGTCCCAACGC
JMFS025F08+ GCAGGCCTCGCTCGCAAACGACCAGCTGAGGGCCCTGTACACTTTGGTACGTCCCAACGC
____________________________________________________________
consensus GCAGGCCTCGCTCGCAAACGACCAGCTGAGGGCCCTGTACACTTTGGTACGTCCCAACGC
. : . : . : . : . : . :
rJMSF014D17+ TGTGGCACTCGTGGATGCTTTTAACTACACCGATCACTTCCTCGATTCAATCCTGGGACG
rJMSF034N01+ TGTGGCACTCGTGGATGCTTTTAACTACACCGATCACTTCCTCGATTCAATCCTGGGACG
rJMSF023G21+ TGTGGCACTCGTGGATGCTTTTAACTACACCGATCACTTCCTCGATTCAATCCTGGGACG
rJMFF030L11+ TGTGGCACTCGTGGATGCTTTTAACTACACCGATCACTTCCTCGATTCAATCCTGGGACG
rJMFF033I14+ TGTGGCACTCGTGGATGCTTTTAACTACACCGATCACTTCCTCGATTCAATCCTGGGACG
JMFS169G10- TGTGGCACTCGTGGATGCTTTTAACTACACCGATCACTTCCTCGATTCAATCCTGGGACG
JMFS025F08+ TGTGGCACTCGTGGATGCTTTTAACTACACCGATCACTTCCTCGATTCAATCCTGGGACG
____________________________________________________________
consensus TGTGGCACTCGTGGATGCTTTTAACTACACCGATCACTTCCTCGATTCAATCCTGGGACG
. : . : . : . : . : . :
rJMSF014D17+ CTATGACGGAAACGTGTACCCAAAACTGTACGAGGCGGCGTGGAAGGATCCTCTGAACGA
rJMSF034N01+ CTATGACGGAAACGTGTACCCAAAACTGTACGAGGCGGCGTGGAAGGATCCTCTGAACGA
rJMSF023G21+ CTATGACGGAAACGTGTACCCAAAACTGTACGAGGCGGCGTGGAAGGATCCTCTGAACGA
rJMFF030L11+ CTATGACGGAAACGTGTACCCAAAACTGTACGAGGCGGCGTGGAAGGATCCTCTGAACGA
rJMFF033I14+ CTATGACGGAAACGTGTACCCAAAACTGTACGAGGCGGCGTGGAAGGATCCTCTGAACGA
JMFS169G10- CTATGACGGAAACGTGTACCCAAAACTGTACGAGGCGGCGTGGAAGGATCCTCTGAACGA
JMFS025F08+ CTATGACGGAAACGTGTACCCAAAACTGTACGAGGCGGCGTGGAAGGATCCTCTGAACGA
____________________________________________________________
consensus CTATGACGGAAACGTGTACCCAAAACTGTACGAGGCGGCGTGGAAGGATCCTCTGAACGA
. : . : . : . : . : . :
rJMSF014D17+ ATCCGTCGTGCCTGATGGCTACCATGAATACATCAGGCCATTGCTGAAGCAACAACTGAG
rJMSF034N01+ ATCCGTCGTGCCTGATGGCTACCATGAATACATCAGGCCATTGCTGAAGCAACAACTGAG
rJMSF023G21+ ATCCGTCGTGCCTGATGGCTACCATGAATACATCAGGCCATTGCTGAAGCAACAACTGAG
rJMFF030L11+ ATCCGTCGTGCCTGATGGCTACCATGAATACATCAGGCCATTGCTGAAGCAACAACTGAG
rJMFF033I14+ ATCCGTCGTGCCTGATGGCTACCATGAATACATCAGGCCATTGCTGAAGCAACAACTGAG
JMFS169G10- ATCCGTCGTGCCTGATGGCTACCATGAATACATCAGGCCATTGCTGAAGCAACAACTGAG
JMFS025F08+ ATCCGTCGTGCCTGATGGCTACCATGAATACATCAGGCCATTGCTGAAGCAACAACTGAG
____________________________________________________________
consensus ATCCGTCGTGCCTGATGGCTACCATGAATACATCAGGCCATTGCTGAAGCAACAACTGAG
. : . : . : . : . : . :
rJMSF014D17+ AATGGCTAGACTTTGAATAAAGAATTGTTTGCTTTAGTTTTTCAATGGATTGGGTCTGAT
rJMSF034N01+ AATGGCTAGACTTTGAATAAAGAATTGTTTGCTTTAGTTTTTCAATGGATTGGGTCTGAT
rJMSF023G21+ AATGGCTAGACTTTGAATAAAGAATTGTTTGCTTTAGTTTTTCAATGGATTGGGTCTGAT
rJMFF030L11+ AATGGCTAGACTTTGAATAAAGAATTGTTTGCTTTAGTTTTTCAATGGATTGGGTCTGAT
rJMFF033I14+ AATGGCTAGACTTTGAATAAAGAATTGTTTGCTTTAGTTTTTCAATGGATTGGGTCTGAT
JMFS169G10- AATGGCTAGACTTTGAATAAAGAATTGTTTGCTTTAGTTTTTCAATGGATTGGGTCTGAT
JMFS025F08+ AATGGCTAGACTTTGAATAAAGAATTGTTTGCTTTAGTTTTTCAATGGATTGGGTCTGAT
____________________________________________________________
consensus AATGGCTAGACTTTGAATAAAGAATTGTTTGCTTTAGTTTTTCAATGGATTGGGTCTGAT
. : . : . : . : . : . :
rJMSF014D17+ GGCTATGGGCTGTTTGCCTGTTTGTTAAATTAGGTGATTTTTCCCTCATGAAGGGGAATG
rJMSF034N01+ GGCTATGGGCTGTTTGCCTGTTTGTTAAATTAGGTGATTTTTCCCTCATGAAGGGGAATG
rJMSF023G21+ GGCTATGGGCTGTTTGCCTGTTTGTTAAATTAGGTGATTTTTCCCTCATGAAGGGGAATG
rJMFF030L11+ GGCTATGGGCTGTTTGCCTGTTTGTTAAATTAGGTGATTTTTCCCTCATGAAGGGGAATG
rJMFF033I14+ GGCTATGGGCTGTTTGCCTGTTTGTTAAATTAGGTGATTTTTCCCTCATGAAGGGGAATG
JMFS169G10- GGCTATGGGCTGTTTGCCTGTTTGTTAAATTAGGTGATTTTTCCCTCATGAAGGGGAATG
JMFS025F08+ GGCTATGGGCTGTTTGCCTGTTTGTTAAATTAGGTGATTTTTCCCTCATGAAGGGGAATG
____________________________________________________________
consensus GGCTATGGGCTGTTTGCCTGTTTGTTAAATTAGGTGATTTTTCCCTCATGAAGGGGAATG
. : . : . : . : . : . :
rJMSF014D17+ GTGGTTGAAAGCAATTATT
rJMSF034N01+ GTGGTTGAAAGCAATTATTTTTAC
rJMSF023G21+ GTGGTTGAAAGCAATTATTTTTACAACTGGAATCCTACAAATGTTCATGAAACTAATGCA
rJMFF030L11+ GTGGTTGAAAGCAATTATTTTTACAACTGGAATCCTACAAATGTTCATGAAACTAATGCA
rJMFF033I14+ GTGGTTGAAAGCAATTATTTTTACAACTGGAATCCTACAAATGTTCATGAAACTAATGCA
JMFS169G10- GTGGTTGAAAGCAATTATTTTTACAACTGGAATCCTACAAATGTTCATGAAACTAATGCA
JMFS025F08+ GTGGTTGAAAGCAATTATTTTTACAACTGGAATCCTACAAATGTTCATGAAACTAATGCA
____________________________________________________________
consensus GTGGTTGAAAGCAATTATTTTTACAACTGGAATCCTACAAATGTTCATGAAACTAATGCA
. : . : . : . : . : . :
rJMSF023G21+ TAATAAT
rJMFF030L11+ TAATAA
rJMFF033I14+ TAATAAT
JMFS169G10- TAATAATACTTATATACAATTATAC
JMFS025F08+ TAATAATACTTATATACAATTATACAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC
____________________________________________________________
consensus TAATAATACTTATATACAATTATACAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC