Contig 006177:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS001A05+                     ATATAGATTTTCATCAATCACTTCATGATATGTCTTCAGACGCAAAAGGT
                      ____________________________________________________________
consensus                       ATATAGATTTTCATCAATCACTTCATGATATGTCTTCAGACGCAAAAGGT
 
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JMFS001A05+           CTCTAAAGTAATCAGAAGAAAGAATGTTCATAGAGAGAACCTTCTCCAACAATTGATCAA
                      ____________________________________________________________
consensus             CTCTAAAGTAATCAGAAGAAAGAATGTTCATAGAGAGAACCTTCTCCAACAATTGATCAA
 
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JMFS001A05+           TTGGCTTCCCAGAACTCCGAATCTCAGCCATATCTCATAAAATACCCACACCACTAGTCA
                      ____________________________________________________________
consensus             TTGGCTTCCCAGAACTCCGAATCTCAGCCATATCTCATAAAATACCCACACCACTAGTCA
 
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JMFS001A05+           ATCAAGCATAAAATTCAATAAACTTTGCCTCTTTGACAGCCAACAATCAGAAAATTGTCA
                      ____________________________________________________________
consensus             ATCAAGCATAAAATTCAATAAACTTTGCCTCTTTGACAGCCAACAATCAGAAAATTGTCA
 
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JMSF013A15+                                           TCGTCCACAGTAGAGGAGACCGTTCGTC
JMSF018H24+                                                                  TCGTC
JMFS001A05+           GCAGGACTTGATTTCCAAACCAAAAGCTACCTTCGTCCACAGTAGAGGAGACCGTTCGTC
                      ____________________________________________________________
consensus             GCAGGACTTGATTTCCAAACCAAAAGCTACCTTCGTCCACAGTAGAGGAGACCGTTCGTC
 
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JMSF013A15+           GCTAGGAGCATGCGAGGAGCGAAGGCGGCGGAGCAGGGCAGCTGGCAGCAGGCGAAGCAG
JMSF018H24+           GCTAGGAGCATGCGAGGAGCGAAGGCGGCGGAGCAGGGCAGCTGGCAGCAGGCGAAGCAG
JMFS001A05+           GCTAGGAGCATGCGAGGAGCGAAGGCGGCGGAGCAGGGCAGCTGGCAGCAGGCGAAGCAG
                      ____________________________________________________________
consensus             GCTAGGAGCATGCGAGGAGCGAAGGCGGCGGAGCAGGGCAGCTGGCAGCAGGCGAAGCAG
 
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JMSF013A15+           GAGATGGAGGACTGGTCTCTGGTCTCTGGTCCGGTGACGAGAAGATTAGGGATTTGGAG-
JMSF018H24+           GAGATGGAGGACTGGTCTCTGGTCTCTGGTCCGGTGACGAGAAGATTAGGGATTTGGAG-
JMFS001A05+           GAGATGGAGGACTGGTCTCTGGTCTCTGGTCCGGTGACGAGAAGATTAGGGATTTGGAGA
                      ____________________________________________________________
consensus             GAGATGGAGGACTGGTCTCTGGTCTCTGGTCCGGTGACGAGAAGATTAGGGATTTGGAG-
 
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JMSF013A15+           ATGGAATTTTGGATCAACTGACCGGCGATTTGGAGATGGGATTTGGATCTCTGGTCATGA
JMSF018H24+           ATGGAATTTTGGATCAACTGACCGGCGATTTGGAGATGGGATTTGGATCTCTGGTCATGA
JMFS001A05+           AGGGAATTTTGGATCAACTGACCGGCGATTTGGAGATGGGATTTGGATCTCTGGTCATGA
                      ____________________________________________________________
consensus             ATGGAATTTTGGATCAACTGACCGGCGATTTGGAGATGGGATTTGGATCTCTGGTCATGA
 
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JMSF013A15+           GCTGTGTTCGATTGGAGGCGAGCAGGCGAGGTCCGTTGGTCGCTGAACATGCGAGGCGCC
JMSF018H24+           GCTGTGTTCGATTGGAGGCGAGCAGGCGAGGTCCGTTGGTCGCTGAACATGCGAGGCGCC
JMFS001A05+           GCTGTGTTCGATTGGAGGCGAGCAGGCGAGGTCCGTTGGTCGCTGAACATGCGAGGCGCC
                      ____________________________________________________________
consensus             GCTGTGTTCGATTGGAGGCGAGCAGGCGAGGTCCGTTGGTCGCTGAACATGCGAGGCGCC
 
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JMSF013A15+           GAGCGG                                                      
JMSF018H24+           GAGCGG                                                      
JMFS001A05+           GAGCGGTGTTCGTCTTCACTCTGTTCGTCGTAATAAATCAGATTTAGGAATTTACTCCGT
                      ____________________________________________________________
consensus             GAGCGGTGTTCGTCTTCACTCTGTTCGTCGTAATAAATCAGATTTAGGAATTTACTCCGT