Contig 006151:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN015C16Sequence621006151 (3)ref|XP_010667361.1|39.7PREDICTED: uncharacterized protein LOC104884418 [Beta vulgaris subsp. vulgaris]
JMFN032B19Sequence616006151 (3)ref|XP_010667361.1|39.7PREDICTED: uncharacterized protein LOC104884418 [Beta vulgaris subsp. vulgaris]
JMFN032D23Sequence610006151 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN015C16+ CTACTAACATANNAACTAATATAAGTA
JMFN032B19+ AACTAATATAAGTA
JMFN032D23+ AATATAAGTA
                      ____________________________________________________________
consensus CTACTAACATANNAACTAATATAAGTA
 
. : . : . : . : . : . :
JMFN015C16+ CCACAATTCAACAAANCTACTAAACATTAAGCCAATAAACATAAACTAATTTTAAACGTA
JMFN032B19+ CCACAATTCAACAAAACTACTAAACATTAAGCCAATAAACATAAACTAATTTTAAACGTA
JMFN032D23+ CCACAATTCAACAAAACTACTAAACATTAAGCCAATAAACATAAACTAATTTTAAACGTA
                      ____________________________________________________________
consensus CCACAATTCAACAAAACTACTAAACATTAAGCCAATAAACATAAACTAATTTTAAACGTA
 
. : . : . : . : . : . :
JMFN015C16+ AAGTATCAATTAAGAAGCGTTTTATTAACCCATTCATCAATAAGAAACTTAGACCATTTG
JMFN032B19+ AAGTATCAACTAAGAAGCGTTTTATTAACCCATTCATCAATAAGAAACTTAGACCATTTG
JMFN032D23+ AAGTATCAATTAAGAAGCGTTTTATTAACCCATTCATCAATAAGAAACTTAGACCATTTG
                      ____________________________________________________________
consensus AAGTATCAATTAAGAAGCGTTTTATTAACCCATTCATCAATAAGAAACTTAGACCATTTG
 
. : . : . : . : . : . :
JMFN015C16+ TCTGTAACTTCATCAATCTCTTTTTTGTTGTAGGGCAATCTTCCTTGTCTTTACAAAGCT
JMFN032B19+ TCTGTAACTTCATCAATCTCTTTTTTGTTGTAGGGCAATCTTCCTTGTCTTTACAAAGCT
JMFN032D23+ TCTGTAACTTCATCAATCTCTTTTTTGTTGTAGGGCAATCTTCCTTGTCTTTACAAAGCT
                      ____________________________________________________________
consensus TCTGTAACTTCATCAATCTCTTTTTTGTTGTAGGGCAATCTTCCTTGTCTTTACAAAGCT
 
. : . : . : . : . : . :
JMFN015C16+ TGTCTTATCAATTCCTTTGCTTAGGTTGTTGGAAACAATTTCCAACATGAACTTCATCAC
JMFN032B19+ TGTCTTATCAATTCCTTTGCTTAGGTTGTTGGAAACAATTTCCAACATGAACTTCATCAC
JMFN032D23+ TGTCTTATCAATTCCTTTGCTTAGGTTGTTGGAAACAATTTCCAACATGAACTTCATCAC
                      ____________________________________________________________
consensus TGTCTTATCAATTCCTTTGCTTAGGTTGTTGGAAACAATTTCCAACATGAACTTCATCAC
 
. : . : . : . : . : . :
JMFN015C16+ ATAATAACCACATTCGGTGGTTCCCTTTTGTATAGCACACGAACCATTTTGGTGGACGAT
JMFN032B19+ ATAATAACCACATTCGGTGGTTCCCTTTTGTATAGCACACGAACCATTTTGGTGGACGAT
JMFN032D23+ ATAATAACCACATTCGGTGGTTCCCTTTTATATAGCACACGAACCATTTTGGTGGACGAT
                      ____________________________________________________________
consensus ATAATAACCACATTCGGTGGTTCCCTTTTGTATAGCACACGAACCATTTTGGTGGACGAT
 
. : . : . : . : . : . :
JMFN015C16+ TTTGTTTCTTTCTACTCATCATGTTTGTTGCAGTCATACACCAGCGTAGAGAGTCGAAGG
JMFN032B19+ TTTGTTTCTTTCTACTCATCATGTTTGTTGCAGTCATACACCAGCGTAGAGAGTCGAAGG
JMFN032D23+ TTTGTTTCTTTCTACTCATCATGTTTGTTGCAGTCATACACCAGCGTAGAGAGTCGAAGG
                      ____________________________________________________________
consensus TTTGTTTCTTTCTACTCATCATGTTTGTTGCAGTCATACACCAGCGTAGAGAGTCGAAGG
 
. : . : . : . : . : . :
JMFN015C16+ AGAGAGCGACCGGCGTCACGGCGTCCCCGGCGTCCGATCTGAGCAGCAGCGGAGAGAATG
JMFN032B19+ AGAGAGCGACCGGCGTCACGGCGTCCCCGGCGTCCGATCTGAGCAGCAGCGGAGAGAATG
JMFN032D23+ AGAGAGCGACCGGCGTCACGGCGTCCCCGGCGTCCGATCTGAGCAGCAGCGGAGAGAATG
                      ____________________________________________________________
consensus AGAGAGCGACCGGCGTCACGGCGTCCCCGGCGTCCGATCTGAGCAGCAGCGGAGAGAATG
 
. : . : . : . : . : . :
JMFN015C16+ GCGTCCGATCTGAGCAGCGGTGGAGAGAATGGCGTCCGATCTGAGCAGCGGCGGAGAGGA
JMFN032B19+ GCGTCCGATCTGAGCAGCGGTGGAGAGAATGGCGTCCGATCTGAGCAGCGGCGGAGAGGA
JMFN032D23+ GCGTCCGATCTGAGCAGCGGTGGAGAGAATGGCGTCCGATCTGAGCAGCGGCGGAGAGGA
                      ____________________________________________________________
consensus GCGTCCGATCTGAGCAGCGGTGGAGAGAATGGCGTCCGATCTGAGCAGCGGCGGAGAGGA
 
. : . : . : . : . : . :
JMFN015C16+ GGGCGTTGGATCTGAGCAGCGGCGGAGAGGAGGTGTAGCGGCGTGGCGGTGCAGCGGTGA
JMFN032B19+ GGGCGTTGGATCTGAGCAGCGGCGGAGAGGAGGTGTAGCGGCGTGGCGGTGCAGCGGTGA
JMFN032D23+ GGGCGTTGGATCTGAGCAGCGGCGGAGAGGAGGTGTAGCGGCGTGGCGGTGCAGCGGTGA
                      ____________________________________________________________
consensus GGGCGTTGGATCTGAGCAGCGGCGGAGAGGAGGTGTAGCGGCGTGGCGGTGCAGCGGTGA
 
. : . : . : . : . : . :
JMFN015C16+ GGCGAACGGTGGT
JMFN032B19+ GGCGAACGGTGGT
JMFN032D23+ GGCGAACGGTGGTGAAGATGAAGATGAAGATGAAGATGAAGGGGAGGGAAGTGTGATGCG
                      ____________________________________________________________
consensus GGCGAACGGTGGTGAAGATGAAGATGAAGATGAAGATGAAGGGGAGGGAAGTGTGATGCG