Contig 006149:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007B24Sequence600006149 (2)ref|XP_004300599.1|2e-93PREDICTED: NEDD8-conjugating enzyme Ubc12 [Fragaria vesca subsp. vesca] ref|XP_
JMFN030K02Sequence612006149 (2)ref|XP_004300599.1|4e-97PREDICTED: NEDD8-conjugating enzyme Ubc12 [Fragaria vesca subsp. vesca] ref|XP_

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN030K02+ CACGTTTGATTG
                      ____________________________________________________________
consensus CACGTTTGATTG
 
. : . : . : . : . : . :
JMFN007B24+ GTCTCTCAACACCGCAGCTGCTTCGTGGTTGAGTGGATCCTCGTG
JMFN030K02+ AAATAACTTTGGGTNGTCTCTCAACACCGCAGCTGCTTCGTGGTTGAGTGGATCCTCGTG
                      ____________________________________________________________
consensus AAATAACTTTGGGTNGTCTCTCAACACCGCAGCTGCTTCGTGGTTGAGTGGATCCTCGTG
 
. : . : . : . : . : . :
JMFN007B24+ ATTCGGATCCGTGAAAAGATGATATAAGCCATAAACAACAGTATTAATGTTGAGGACGGG
JMFN030K02+ ATTCGGATCCGTGAAAAGATGATATAAGCCATAAACAACAGTATTAATGTTGAGGACGGG
                      ____________________________________________________________
consensus ATTCGGATCCGTGAAAAGATGATATAAGCCATAAACAACAGTATTAATGTTGAGGACGGG
 
. : . : . : . : . : . :
JMFN007B24+ TTTCCAATCTTCTCTGAGAATATTGAGGCAAACATTCCCTTCCAAATCAATATTAGGATG
JMFN030K02+ TTTCCAATCTTCTCTGAGAATATTGAGGCAAACATTCCCTTCCAAATCAATATTAGGATG
                      ____________________________________________________________
consensus TTTCCAATCTTCTCTGAGAATATTGAGGCAAACATTCCCTTCCAAATCAATATTAGGATG
 
. : . : . : . : . : . :
JMFN007B24+ GTACACCTTTGTCTTGCACTTGACTTTTGGCGGCTCATGTGGATAGATAGGAGAAACTTG
JMFN030K02+ GTACACCTTTGTCTTGCACTTGACTTTTGGCGGCTCATGTGGATAGATAGGAGAAACTTG
                      ____________________________________________________________
consensus GTACACCTTTGTCTTGCACTTGACTTTTGGCGGCTCATGTGGATAGATAGGAGAAACTTG
 
. : . : . : . : . : . :
JMFN007B24+ GAACGAGAATAAAAATTTCCCACCTTGATAATATCCATCATCTGGTTTAATGGTGATTTC
JMFN030K02+ GAACGAGAATAAAAATTTCCCACCTTGATAATATCCATCATCTGGTTTAATGGTGATTTC
                      ____________________________________________________________
consensus GAACGAGAATAAAAATTTCCCACCTTGATAATATCCATCATCTGGTTTAATGGTGATTTC
 
. : . : . : . : . : . :
JMFN007B24+ AAAGTTCATCAGATTGTCACTCCCATTGGGGAAGGCAATTGTACAAGATTTGGGTAGGTT
JMFN030K02+ AAAGTTCATCAGATTGTCACTCCCATTGGGGAAGGCAATTGTACAAGATTTGGGTAGGTT
                      ____________________________________________________________
consensus AAAGTTCATCAGATTGTCACTCCCATTGGGGAAGGCAATTGTACAAGATTTGGGTAGGTT
 
. : . : . : . : . : . :
JMFN007B24+ CAGCTCAGTGATGTCTTTGCGCAAGCGTAGTTCCCCAGCACTCTGTCTGTTAACAGGGCC
JMFN030K02+ CAGCTCAGTGATGTCTTTGCGCAAGCGTAGTTCCCCAGCACTCTGTCTGTTAACAGGGCC
                      ____________________________________________________________
consensus CAGCTCAGTGATGTCTTTGCGCAAGCGTAGTTCCCCAGCACTCTGTCTGTTAACAGGGCC
 
. : . : . : . : . : . :
JMFN007B24+ ATTCCCACTTGCATTTTCATTAGCTTTTTGTTGCTGCTTTACTTTGAACAATTTGATCAT
JMFN030K02+ ATTCCCACTTGCATTTTCATTAGCTTTTTGTTGCTGCTTTACTTTGAACAATTTGATCAT
                      ____________________________________________________________
consensus ATTCCCACTTGCATTTTCATTAGCTTTTTGTTGCTGCTTTACTTTGAACAATTTGATCAT
 
. : . : . : . : . : . :
JMFN007B24+ TGTACCTTCTCGGAAAAGGGCTTAAACTCGAAATTGTGATTAGTTCTGAGGCTGGAGAGC
JMFN030K02+ TGTACCTTCTCGGAAAAGGGCTTAAACTCGAAATTGTGATTAGTTCTGAGGCTGGAGAGC
                      ____________________________________________________________
consensus TGTACCTTCTCGGAAAAGGGCTTAAACTCGAAATTGTGATTAGTTCTGAGGCTGGAGAGC
 
. : . : . : . : . : . :
JMFN007B24+ TGTTCACGATAACGTAGATTGTTTAGCGATTCGGCCGGATTCCAATACG
JMFN030K02+ TGTTCACGATAACGTAGATTGTTTAGCGATTCGGCCGGATTCCAATACGGTGCTATCAGA
                      ____________________________________________________________
consensus TGTTCACGATAACGTAGATTGTTTAGCGATTCGGCCGGATTCCAATACGGTGCTATCAGA