Contig 006148:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN001B09Sequence517006148 (3)ref|XP_004133771.1|3e-20PREDICTED: protein transport protein Sec61 subunit beta-like isoform 1 [Cucumis
JMFN012G11Sequence519006148 (3)ref|XP_004133771.1|3e-20PREDICTED: protein transport protein Sec61 subunit beta-like isoform 1 [Cucumis
JMFN030D17Sequence514006148 (3)ref|XP_004133771.1|3e-20PREDICTED: protein transport protein Sec61 subunit beta-like isoform 1 [Cucumis

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN012G11+ AATGTCTAAAAATTCATGACAGAATAGCAACACTAAGGTAACATGATTTTGA
JMFN001B09+ TGTCTAAAAATTCATGACAGAATAGCAACACTAAGGTAACATGATTTTGA
JMFN030D17+ ACAGAATAGCAACACTAAGGTAACATGATTTTGA
                      ____________________________________________________________
consensus AATGTCTAAAAATTCATGACAGAATAGCAACACTAAGGTAACATGATTTTGA
 
. : . : . : . : . : . :
JMFN012G11+ GTCCCAAAACAAATGTAGCTGTTGGAAGATGAAAAGTAGTCACTCTATAATAACATCAGA
JMFN001B09+ GTCCCAAAATAAATGTAGCTGTTGGAAGATGAAAAGTAGTCACTCTATAATAACATCAGA
JMFN030D17+ GTCCCAAAACAAATGTAGCTGTTGGAAGATGAAAAGTAGTCACTCTATAATAACATCAGA
                      ____________________________________________________________
consensus GTCCCAAAACAAATGTAGCTGTTGGAAGATGAAAAGTAGTCACTCTATAATAACATCAGA
 
. : . : . : . : . : . :
JMFN012G11+ TAAGATTGAATAGAAGCAAAAACAAAAAGCAGAGAGGGGAGGAGAAGGGCGTTTGTTGTT
JMFN001B09+ TAAGATTGAATAGAAGCAAAAACAAAAAGCAGAGAGGGGAGGAGAAGGGCGTTTGTTGTT
JMFN030D17+ TAAGATTGAATAGAAGCAAAAACAAAAAGCAGAGAGGGGAGGAGAAGGGCGTTTGTTGTT
                      ____________________________________________________________
consensus TAAGATTGAATAGAAGCAAAAACAAAAAGCAGAGAGGGGAGGAGAAGGGCGTTTGTTGTT
 
. : . : . : . : . : . :
JMFN012G11+ AAAAAAGCTGAGTATTTTCTAGGCTTCTCTACGGAAGTACAATTTACCCATGACATGAAG
JMFN001B09+ AAAAAAGCTGAGTATTTTCTAGGCTTCTCTACGGAAGTACAATTTACCCATGACATGAAG
JMFN030D17+ AAAAAAGCTGAGTATTTTCTAGGCTTCTCTACGGAAGTACAATTTACCCATGACATGAAG
                      ____________________________________________________________
consensus AAAAAAGCTGAGTATTTTCTAGGCTTCTCTACGGAAGTACAATTTACCCATGACATGAAG
 
. : . : . : . : . : . :
JMFN012G11+ AATAGCAACAAATGCTATGAAGCCAATGCTCATGACAAGCACAACATTGGGAGAAATCTT
JMFN001B09+ AATAGCAACAAATGCTATGAAGCCAATGCTCATGACAAGCACAACATTGGGAGAAATCTT
JMFN030D17+ AATAGCAACAAATGCTATGAAGCCAATGCTCATGACAAGCACAACATTGGGAGAAATCTT
                      ____________________________________________________________
consensus AATAGCAACAAATGCTATGAAGCCAATGCTCATGACAAGCACAACATTGGGAGAAATCTT
 
. : . : . : . : . : . :
JMFN012G11+ CAATCCAGGAGCATCATCAGTGTAAAATTGGAGCATAGTACCACTGGCACCTCCTCCTCC
JMFN001B09+ CAATCCAGGAGCATCATCAGTGTAAAATTGGAGCATAGTACCACTGGCACCTCCTCCTCC
JMFN030D17+ CAATCCAGGAGCATCATCAGTGTAAAATTGGAGCATAGTACCACTGGCACCTCCTCCTCC
                      ____________________________________________________________
consensus CAATCCAGGAGCATCATCAGTGTAAAATTGGAGCATAGTACCACTGGCACCTCCTCCTCC
 
. : . : . : . : . : . :
JMFN012G11+ AGCAGCACCACTCGCACCTCCTCCAGTCCTCCTGCGACGCATGTTGGCAGCTGCAGCTGC
JMFN001B09+ AGCAGCACCACTCGCACCTCCTCCAGTCCTCCTGCGACGCATGTTGGCAGCTGCAGCTGC
JMFN030D17+ AGCAGCACCACTCGCACCTCCTCCAGTCCTCCTGCGACGCATGTTGGCAGCTGCAGCTGC
                      ____________________________________________________________
consensus AGCAGCACCACTCGCACCTCCTCCAGTCCTCCTGCGACGCATGTTGGCAGCTGCAGCTGC
 
. : . : . : . : . : . :
JMFN012G11+ GGCAGTTCCTCTTTGTGGACCACCTCCCAACGCCATTTCTTAA
JMFN001B09+ GGCAGTTCCTCTTTGTGGACCACCTCCCAACGCCATTTCTTAA
JMFN030D17+ GGCAGTTCCTCTTTGTGGACCACCTCCCAACGCCATTTCTTAAATCAAAAGAAATTCGAT
                      ____________________________________________________________
consensus GGCAGTTCCTCTTTGTGGACCACCTCCCAACGCCATTTCTTAAATCAAAAGAAATTCGAT
 
. : . : . : . : . : . :
JMFN030D17+ TAGATCTCTCGTCGAATTAGACTTCTTCTGATCCGATCGCTGGATTGAAAAATCAAAATC
                      ____________________________________________________________
consensus TAGATCTCTCGTCGAATTAGACTTCTTCTGATCCGATCGCTGGATTGAAAAATCAAAATC