Contig 006140:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013J17Sequence551006140 (2)ref|XP_009631964.1|2e-64PREDICTED: tetraspanin-2-like [Nicotiana tomentosiformis]
JMFN017A14Sequence626006140 (2)ref|XP_009785507.1|6e-82PREDICTED: tetraspanin-2 [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN017A14+ TCATAGGATAAGTTGGATTGATCCAC
                      ____________________________________________________________
consensus TCATAGGATAAGTTGGATTGATCCAC
 
. : . : . : . : . : . :
JMFN017A14+ ATTGTCGGACTCACGTATTGGTAACCACATATTGTTGGGGGCTTGCAACATCCTGACTGC
                      ____________________________________________________________
consensus ATTGTCGGACTCACGTATTGGTAACCACATATTGTTGGGGGCTTGCAACATCCTGACTGC
 
. : . : . : . : . : . :
JMFN017A14+ AGAGGAGAAAGACGGGCGGCGAAGAATAGTTGAGCAGTGAAGTAGTTATTATTCATGGCG
                      ____________________________________________________________
consensus AGAGGAGAAAGACGGGCGGCGAAGAATAGTTGAGCAGTGAAGTAGTTATTATTCATGGCG
 
. : . : . : . : . : . :
JMFN017A14+ GGACAAATATGAGGATCCGCAGCCAAACACGCCCTAATGTCCGCCCAGTAATCGTCCCCG
                      ____________________________________________________________
consensus GGACAAATATGAGGATCCGCAGCCAAACACGCCCTAATGTCCGCCCAGTAATCGTCCCCG
 
. : . : . : . : . : . :
JMFN017A14+ GTGACATGATCCCTGAGCCAAGCAGAGTAGCCACCGAGGCGGTAATCGTGGTAGCGGCGG
                      ____________________________________________________________
consensus GTGACATGATCCCTGAGCCAAGCAGAGTAGCCACCGAGGCGGTAATCGTGGTAGCGGCGG
 
. : . : . : . : . : . :
JMFF013J17+ GTGACGACGGAGGCGAGGATGAGGAGGGAG
JMFN017A14+ CCGGGGACGGCGTAGGAGCCGTCGGGGGGCGTGACGACGGAGGCGAGGATGAGGAGGGAG
                      ____________________________________________________________
consensus CCGGGGACGGCGTAGGAGCCGTCGGGGGGCGTGACGACGGAGGCGAGGATGAGGAGGGAG
 
. : . : . : . : . : . :
JMFF013J17+ AGGAGGAGGACGATGAGGATGGCCATGGAGACGAGGTAGACGCCGAGAAGGCCCTCTTTG
JMFN017A14+ AGGAGGAGGACGATGAGGATGGCCATGGAGACGAGGTAGACGCCGAGAAGGCCCTCTTTG
                      ____________________________________________________________
consensus AGGAGGAGGACGATGAGGATGGCCATGGAGACGAGGTAGACGCCGAGAAGGCCCTCTTTG
 
. : . : . : . : . : . :
JMFF013J17+ TTCCAGTAGGCGCCGGCGAAGCCGGTGAGGGAGACAAGGAGGAGGGCGACGCCCATGACG
JMFN017A14+ TTCCAGTAGGCGCCGGCGAAGCCGGTGAGGGAGACAAGGAGGAGGGCGACGCCCATGACG
                      ____________________________________________________________
consensus TTCCAGTAGGCGCCGGCGAAGCCGGTGAGGGAGACAAGGAGGAGGGCGACGCCCATGACG
 
. : . : . : . : . : . :
JMFF013J17+ ACGAGGGGCCACCGGAGCCAGAGGATGCACTGGTTGTCGGCCTTGGAGGCCAGCCAGATT
JMFN017A14+ ACGAGGGGCCACCGGAGCCAGAGGATGCACTGGTTGTCGGCCTTGGAGGCCAGCCAGATT
                      ____________________________________________________________
consensus ACGAGGGGCCACCGGAGCCAGAGGATGCACTGGTTGTCGGCCTTGGAGGCCAGCCAGATT
 
. : . : . : . : . : . :
JMFF013J17+ CCGGCGGAGATGATGGGTATGGAGCACATAAAGGCCACGAAGTTTAGGAAAGCTGTTATG
JMFN017A14+ CCGGCGGAGATGATGGGTATGGAGCACATAAAGGCCACGAAGTTTAGGAAAGCTGTTATG
                      ____________________________________________________________
consensus CCGGCGGAGATGATGGGTATGGAGCACATAAAGGCCACGAAGTTTAGGAAAGCTGTTATG
 
. : . : . : . : . : . :
JMFF013J17+ TTGTTGCTTAGCGAC
JMFN017A14+ TTGTTGCTTAGCGACGACGCCATTGTTGTTACGTTGGTTTCGATCTGTGACTAAAGCTAG
                      ____________________________________________________________
consensus TTGTTGCTTAGCGACGACGCCATTGTTGTTACGTTGGTTTCGATCTGTGACTAAAGCTAG