Contig 006122:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS013G04-                     TCTCGAGTTTTTTTTTTTTTTTTTTGAAGCAAGTGAAAATCAGTATTCTG
JMFN008D16+                                                        AAAATCAGTATTCTG
JMFN018N21+                                                                    CTG
rJMFF013H23-                                                                   CTG
                      ____________________________________________________________
consensus                       TCTCGAGTTTTTTTTTTTTTTTTTTGAAGCAAGTGAAAATCAGTATTCTG
 
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JMFS013G04-           TCAACTGTATATTTGGTACAACAAATAGTCTAGCAACCATAATTCCGGCCGCTAACCTTA
JMFN008D16+           TCAACTGTATATTTGGTACAACAAATAGTCTAGCAACCATAATTCCGGCCGCTAACCTTA
JMFN018N21+           TCAACTGTATATTTGGTATAACAAATAGTCTAGCAACCATAATTCCGGCCGCTAACCTTA
rJMSF030O23-                                                   ATTCCGGCCGCTAACCTTA
rJMFF013H23-          TCAACTGTATATTTGGTACAACAAATAGTCTAGCAACCATAATTCCGGCCGCTAACCTTA
                      ____________________________________________________________
consensus             TCAACTGTATATTTGGTACAACAAATAGTCTAGCAACCATAATTCCGGCCGCTAACCTTA
 
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JMFS013G04-           TTCTATTTAACAGATTCAATAACAGAGGTACTGTATAGTATATATACTACGGAGTATTAA
JMFN008D16+           TTCTATTTAACAGATTCAATAACAGAGGTACTGTATAGTATATATACTACGGAGTATTAA
JMFN018N21+           TTCTATTTAACAGATTCAATAACAGAGGTACTGTATAGTATATATACTACGGAGTATTAA
rJMSF030O23-          TTCTATTTAACAGATTCAATAACAGAGGTACTGTATAGTATATATACTACGGAGTATTAA
rJMFF013H23-          TTCTATTTAACAGATTCAATAACAGAGGTACTGTATAGTATATATACTACGGAGTATTAA
JMFN020P07+                                          TGTATAGTATATATACTACGGAGTATT-A
                      ____________________________________________________________
consensus             TTCTATTTAACAGATTCAATAACAGAGGTACTGTATAGTATATATACTACGGAGTATTAA
 
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JMFS013G04-           TTATTTTCAAGTTTTGGGAAAAGAACACCCATATAATTCCAAAGCTAGCTTAGCTTTAGA
JMFN008D16+           TTATTTTCAAGTTTTGGGAAAAGAACACCCATATAATTCCAAAGCTAGCTTAGCTTTAGA
JMFN018N21+           TTATTTTCAAGTTTTGGGAAAAGAACACCCATATAATTCCAAAGCTAGCTTAGCTTTAGA
rJMSF030O23-          TTATTTTCAAGTTTTGGGAAAAGAACACCCATATAATTCCAAAGCTAGCTTAGCTTTAGA
rJMFF013H23-          TTATTTTCAAGTTTTGGGAAAAGAACACCCATATAATTCCAAAGCTAGCTTAGCTTTAGA
JMFN020P07+           TTATTTTCAAG-TTTGGGAAAAGAACACCCATATAATTCCANAGCTAGCTTAGCTTTAGA
                      ____________________________________________________________
consensus             TTATTTTCAAGTTTTGGGAAAAGAACACCCATATAATTCCAAAGCTAGCTTAGCTTTAGA
 
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JMFS013G04-           TAATTGTGCAATTAGGCAAGATGTCCCATCAAAAGCCACGATCATGCTTCGTAAACCACG
JMFN008D16+           TAATTGTGCAATTAGGCAAGATGTCCCATCAAAAGCCACGATCATGCTTCGTAAACCACG
JMFN018N21+           TAATTGTGCAATTAGGCAAGATGTCCCATCAAAAGCCACGATCATGCTTCGTAAACCACG
rJMSF030O23-          TAATTGTGCAATTAGGCAAGATGTCCCATCAAAAGCCACGATCATGCTTCGTAAACCACG
rJMFF013H23-          TAATTGTGCAATTAGGCAAGATGTCCCATCAAAAGCCACGATCATGCTTCGTAAACCACG
JMFN020P07+           TAATTGTGCAATTAGGCAAGATGTCCCATCAANAGCCACGATCATGCTTCGTAAACCACG
                      ____________________________________________________________
consensus             TAATTGTGCAATTAGGCAAGATGTCCCATCAAAAGCCACGATCATGCTTCGTAAACCACG
 
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JMFS013G04-           ATATTATGTGATAATGACGGGCCGGGTGGAGCGGTGCGATTACATGATTGAGCAAGAACT
JMFN008D16+           ATATTATGTGATAATGACGGGCCGGGTGGAGCGGTGCGATTACATGATTGAGCAAGAACT
JMFN018N21+           ATATTATGTGATAATGACGGGCCGGGTGGAGCGGTGCGATTACATGATTGAGCAAGAACT
rJMSF030O23-          ATATTATGTGATAATGACGGGCCGGGTGGAGCGGTGCGATTACATGATTGAGCAAGAACT
rJMFF013H23-          ATATTATGTGATAATGACGGGCCGGGTGGAGCGGTGCGATTACATGATTGAGCAAGAACT
JMFN020P07+           ATATTATGTGATAATGACGGGCCGGGTGGAGCGGTGCGATTACATGATTGAGCAAGAACT
JMCP010A03-                                                         ATTGAGCAAGAACT
rJMCP003D01-                                    TGGAGCGGTGCGATTACATGATTGAGCAAGAACT
                      ____________________________________________________________
consensus             ATATTATGTGATAATGACGGGCCGGGTGGAGCGGTGCGATTACATGATTGAGCAAGAACT
 
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JMFS013G04-           ATTGTCTAATT                                                 
JMFN008D16+           ATTGTCTAATTCACAGTAGTAGTTATTACACTCACATCTGCATCCATAATAGCCTCTGGA
JMFN018N21+           ATTGTCTAATTCACAGTAGTAGTTATTACACTCACATCTGCATCCATAATAGCCTCTGGA
rJMSF030O23-          ATTGTCTAATTCACAGTAGTAGTTATTACACTCACATCTGCATCCATAATAGCCTCTGGA
rJMFF013H23-          ATTGTCTAATTCACAGTAGTAGTTATTACACTCACATCTGCATCCATAATAGCCTCTGGA
JMFN020P07+           ATTGTCTAATTCACAGTAGTAGTTATTACACTCACATCTGCATCCATAATAGCCTCTGGA
JMCP010A03-           AaacTCTAATTCACAGTtcatcTTATTACACTCACATCTGCATCCATAATtcgCTCTGGA
rJMCP003D01-          ATTGTCTAATTCACAGTAGTAGTTATTACACTCACATCTGCATCCATAATAGCCTCTGGA
                      ____________________________________________________________
consensus             ATTGTCTAATTCACAGTAGTAGTTATTACACTCACATCTGCATCCATAATAGCCTCTGGA
 
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JMFN008D16+           CTGCCATCATCGACACCCGAAAAAGGGCTCATAACATGGCCGCGGCGGCGGAGGTGGCGG
JMFN018N21+           CTGCCCACATCGACACCCGAAAAAGGGCTCATAACATGGCCGCGGCGGCGGAGGTGGCGG
rJMSF030O23-          CTGCCCACATCGACACCCGAAAAAGGGCTCATAACATGGCCGCGGCGGCGGAGGTGGCGG
rJMFF013H23-          CTGCCCACATCGACACCCGAAAAAGGGCTCATAACATGGCCGCGGCGGCGGAGGTGGCGG
JMFN020P07+           CTGCCCACATCGACACCCGAAAAAGGGCTCATAACATGGCCGCGGCGGCGGAGGTGGCGG
JMCP010A03-           gacCCCACATgctgACCCGAAAAAGGGCTCATAACATGGCCGCGGCGGCGGtccTGGCGG
rJMCP003D01-          CTGCCCACATCGACACCCGAAAAAGGGCTCATAACATGGCCGCGGCGGCGGAGGTGGCGG
                      ____________________________________________________________
consensus             CTGCCCACATCGACACCCGAAAAAGGGCTCATAACATGGCCGCGGCGGCGGAGGTGGCGG
 
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JMFN008D16+           TGGCGGCGGTCTTCCGTACCAACCATAACATGGTCCACCGGGTATCCCTTGGGCACATGA
JMFN018N21+           TGGCGGCGGTCTTCCGTACCAACCATAACATGGTCCACCGGGTATCCCTTGGGCACATGA
rJMSF030O23-          TGGCGGCGGTCTTCCGTACCAACCATAACATGGTCCACCGGGTATCCCTTGGGCACATGA
rJMFF013H23-          TGGCGGCGGTCTTCCGTACCAACCATAACATGGTCCACCGGGTATCCCTTGGGCACATGA
JMFN020P07+           TGGCGGCGGTCTTCCGTACCAACCATAACATGGTCCACCGGGTATCCCTTGGGCACATGA
JMCP010A03-           TGGCGGCGGTCTTCCGTACCAACCATAACATGGTCCACCGGGaATCCCTTGGGCACATGA
rJMCP003D01-          TGGCGGCGGTCTTCCGTACCAACCATAACATGGTCCACCGGGTATCCCTTGGGCACATGA
                      ____________________________________________________________
consensus             TGGCGGCGGTCTTCCGTACCAACCATAACATGGTCCACCGGGTATCCCTTGGGCACATGA
 
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JMFN008D16+           CCCGCAACAAAACCCAAAGGGTGGCTGCGCTGGGTAA                       
JMFN018N21+           CCCGCAACAAAACCCAAAGGGTGGCTGCGCTGGGTAACATGGGTTACATGGCACCACAAA
rJMSF030O23-          CCCGCAACAAAACCCAAAGGGTGGCTGCGCTGGGTAACATGGGTTACATGGCACCACAAA
rJMFF013H23-          CCCGCAACAAAACCCAAAGGGTGGCTGCGCTGGGTAACATGGGTTACATGGCACCACAAA
JMFN020P07+           CCCGCAACAAAACCCAAAGGGTGGCTGCGCTGGGTAACATGGGTTACATGGCACCACAAA
JMCP010A03-           CCCGCAACAAAACCCAAAGGGTGGCTGCGCTGGGTAACATGGGTTAgtTGGCACCACAAA
rJMCP003D01-          CCCGCAACAAAACCCAAAGGGTGGCTGCGCTGGGTAACATGGGTTACATGGCACCACAAA
JMSF030O23+                                                                 CACAAA
                      ____________________________________________________________
consensus             CCCGCAACAAAACCCAAAGGGTGGCTGCGCTGGGTAACATGGGTTACATGGCACCACAAA
 
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JMFN018N21+           CACGGGTTCGGGTTCCGGGATCTTTGGCGGTTGTGGTAGCGGTGCTGGTACTATGGGTTT
rJMSF030O23-          CACGGGTTCGGGTTCCGGGATCTTTGGCGGTTGTGGTAGCGGTGCTGGTACTATGGGTTT
rJMFF013H23-          CACGGGTTCGGGTTCCGGGATCTTTGGCGGTTGTGGTAGCGGTGCTGGTACTATGGGTTT
JMFN020P07+           CACGGGTTCGGGTTCCGGGATCTTTGGCGGTTGTGGTAGCGGTGCTGGTACTATGGGTTT
JMCP010A03-           CACGGGTTCGGGTTCCGGGATCTTTGGCGGTTGTGGTtcgGGTGCTGGTtCTATGGGTTT
rJMCP003D01-          CACGGGTTCGGGTTCCGGGATCTTTGGCGGTTGTGGTAGCGGTGCTGGTACTATGGGTTT
JMSF030O23+           CACGGGTTCGGGTTCCGGGATCTTTGGCGGTTGTGGTAGCGGTGCTGGTACTATGGGTTT
JMFN037A01+                                                                  GGTTN
                      ____________________________________________________________
consensus             CACGGGTTCGGGTTCCGGGATCTTTGGCGGTTGTGGTAGCGGTGCTGGTACTATGGGTTT
 
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JMFN018N21+           AGGAGCCGGTG                                                 
rJMSF030O23-          AGGAGCCGGTGCCGGTGCCGGAG                                     
rJMFF013H23-          AGGAGCCGGTGCCGGTGCCGGAGCCGGAGCCGGANCTGGCGGTTTGGGCTTTTCANGAGG
JMFN020P07+           AGGAGCCGGTGCCGGTGCCGGAGCCGGAGCCGGAGCTGGCGGTTTGGGCTTTTCAGGAGG
JMCP010A03-           AGGAGCCGGTGCgccTGCgcctcCCGGAcgCGGAGCTGGCGGTTTGGGCTTTTgtcctGG
rJMCP003D01-          AGGAGCCGGTGCCGGTGCCGGAGCCGGAGCCGGAGCTGGCGGTTTGGGCTTTTCAGGAGG
JMSF030O23+           AGGAGCCGGTGCCGGTGCCGGAGCCGGAGCCGGAGCNGGCGGTTTGGGCTTTTCAGGAGG
JMFN037A01+           AGGAGCCGGTGCCGGTGCCGGAGCCGGAGCCGGAGCTGGCGGTTTGGGCTTTTCAGGAGG
                      ____________________________________________________________
consensus             AGGAGCCGGTGCCGGTGCCGGAGCCGGAGCCGGAGCTGGCGGTTTGGGCTTTTCAGGAGG
 
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rJMFF013H23-          TGGAGCGGGTTTCTCTTTGGGCTTCT                                  
JMFN020P07+           TGGAGCGGGTTTCTCTTTGGGCTTCTCGGGTTCCTTGGGCTTTTCTGGAGGCGGCTTGGG
JMCP010A03-           TGGAGCGGGTTTCTCTTTGGGCTTCTCGGGTTCCTTcGGCTTTTCTGGAGGCGGCTTGcc
rJMCP003D01-          TGGAGCGGGTTTCTCTTTGGGCTTCTCGGGTTCCTTGGGCTTTTCTGGAGGCGGCTTGGG
JMSF030O23+           TGGAGCGGGTTTCTCTTTGGGCTTCTCGGGTTCCTTGGGCTTTTCTGGAGGCGGCTTGGG
JMFN037A01+           TGGAGCGGGTTTCTCTTTGGGCTTCTCGGGTTCCTTGGGCTTTTCTGGAGGCGGCTTGGG
JMFF013H23+                           TTGGGCTTCTCGGGTTCCTTGGGCTTTTCTGGAGGCGGCTTGGG
                      ____________________________________________________________
consensus             TGGAGCGGGTTTCTCTTTGGGCTTCTCGGGTTCCTTGGGCTTTTCTGGAGGCGGCTTGGG
 
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JMFN020P07+           CTTTTCGGGTTCCTTAGGCTTTTCAGGAGGCGGCT                         
JMCP010A03-           CTTTTCGGGTTCCaaAGcgaTTagtcctcGCGGCTTGGGTTTTTCtGGCTCTTTGGGCTT
rJMCP003D01-          CTTTTCGGGTTCCTTAGGCTTTTCAGGAGGCGGCTTGGGTTTTTCAGGCTCTTTGGGCTT
JMSF030O23+           CTTTTCGGGTTCCTTAGGCTTTTCAGGAGGCGGCTTGGGTTTTTCAGGCTCTTTGGGCTT
JMFN037A01+           CTTTTCGGGTTCCTTAGGCTTTTCAGGAGGCGGCTTGGGTTTTTCAGGCTCTTTGGGCTT
JMFF013H23+           CTTTTCGGGTTCCTTAGGCTTTTCAGGAGGCGGCTTGGGTTTTTCAGGCTCTTTGGGCTT
JMFN006J08+             TTTCGGGTTCCTTAGGCTTTTCAGGAGGCGGCTTGGGTTTTTCAGGCTCTTTGGGCTT
                      ____________________________________________________________
consensus             CTTTTCGGGTTCCTTAGGCTTTTCAGGAGGCGGCTTGGGTTTTTCAGGCTCTTTGGGCTT
 
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JMCP010A03-           TTCGGGTGGgccgaacccgaaagagttcgagaTTGGGgTTTTCAGcAccTGGCTTGGGCT
rJMCP003D01-          TTCGGGTGGCGGCTTGGGC-TTCTCAGGCTCTTTGGGCTTTTCAGGAGGTGGCTTGGGCT
JMSF030O23+           TTCGGGTGGCGGCTTGGGC-TTCTCAGGCTCTTTGGGCTTTTCAGGAGGTGGCTTGGGCT
JMFN037A01+           TTCGGGTGGCGGCTTGGGC-TTCTCAGGCTCTTTGGGCTTTTCAGGAGGTGGCTTGGGCT
JMFF013H23+           TTCGGGTGGCGGCTTGGGC-TTCTCAGGCTCTTTGGGCTTTTCAGGAGGTGGCTTGGGCT
JMFN006J08+           TTCGGGTGGCGGCTTGGGC-TTCTCAGGCTCTTTGGGCTTTTCAGGAGGTGGCTTGGGCT
                      ____________________________________________________________
consensus             TTCGGGTGGCGGCTTGGGC-TTCTCAGGCTCTTTGGGCTTTTCAGGAGGTGGCTTGGGCT
 
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JMCP010A03-           TTTCTGGAGCTCTGGGCGTTGGAGGCTCAACAATCTCAA                     
rJMCP003D01-          TTTCTGGAGCTCTGGGCGTTGGAGGCTCAACAATCTCAATACTC                
JMSF030O23+           TTTCTGGAGCTCTGGGCGTTGGAGGCTCAACAATCTCAATACTCTTGATTACCCCGCATC
JMFN037A01+           TTTCTGGAGCTCTGGGCGTTGGAGGCTCAACAATCTCAATACTCTTGATTACCCCGCATC
JMFF013H23+           TTTCTGGAGCTCTGGGCGTTGGAGGCTCAACAATCTCAATACTCTTGATTACCCCGCATC
JMFN006J08+           TTTCTGGAGCTCTGGGCGTTGGAGGCTCAACAATCTCAATACTCTTGATTACCCCGCATC
                      ____________________________________________________________
consensus             TTTCTGGAGCTCTGGGCGTTGGAGGCTCAACAATCTCAATACTCTTGATTACCCCGCATC
 
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JMSF030O23+           CCTTACAGCACAATTTGTCACGAATTTTCTCAGGGCTACAACACACCACAGTAATGAACA
JMFN037A01+           CCTTACAGCACAATTTGTCACGAATTTTCTCAGGGCTACAACACACCACAGTAATGAACA
JMFF013H23+           CCTTACAGCACAATTTGTCACGAATTTTCTCAGGGCTACAACACACCACAGTAATGAACA
JMFN006J08+           CCTTACAGCACAATTTGTCACGAATTTTCTCAGGGCTACAACACACCACAGTAATGAACA
                      ____________________________________________________________
consensus             CCTTACAGCACAATTTGTCACGAATTTTCTCAGGGCTACAACACACCACAGTAATGAACA
 
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JMSF030O23+           CCTTATTTGCCTTCTCATCAAATTTCCGGTCTTTAATTTGCGGAAACTTGCAAATTACTT
JMFN037A01+           CCTTATTTGCCTTCTCATCAAATTTCCGGTCTTTAATTTGCGGAAACTTGCAAATTACTT
JMFF013H23+           CCTTATTTGCCTTCTCATCAAATTTCCGGTCTTTAATTTGCGGAAACTTGCAAATTACTT
JMFN006J08+           CCTTATTTGCCTTCTCATCAAATTTCCGGTCTTTAATTTGCGGAAACTTGCAAATTACTT
                      ____________________________________________________________
consensus             CCTTATTTGCCTTCTCATCAAATTTCCGGTCTTTAATTTGCGGAAACTTGCAAATTACTT
 
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JMSF030O23+           TCTTCACCTTCTTGTAGCAGCTGGAGCATTGAAGATCAACGTTTAGGATCATAAGCGTCG
JMFN037A01+           TCTTCACCTTCTTGTAGCAGCTGGAGCATTGAAGATCAACGTTTAGGATCATAAGCGTCG
JMFF013H23+           TCTTCACCTTCTTGTAGCAGCTGGAGCATTGAAGATCAACGTTTAGGATCATAAGCGTCG
JMFN006J08+           TCTTCACCTTCTTGTAGCAGCTGGAGCATTGAAGATCAACGTTTAGGATCATAAGCGTCG
                      ____________________________________________________________
consensus             TCTTCACCTTCTTGTAGCAGCTGGAGCATTGAAGATCAACGTTTAGGATCATAAGCGTCG
 
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JMSF030O23+           TCTTCTGAGCTTCCTCTCCCATGGCTGATGGTGATCGGAAGTAATCACAGCCACTGGCCA
JMFN037A01+           TCTTCTGAGCTTCCTCTCCCATGGCTGATGGTGATCGGAAGTAATCACAGCCACTGGCCA
JMFF013H23+           TCTTCTGAGCTTCCTCTCCCATGGCTGATGGTGATCGGAAGTAATCACAGCCACTGGCCA
JMFN006J08+           TCTTCTGAGCTTCCTCTCCCATGGCTGATGGTGATCGGAAGTAATCACAGCCACTGGCCA
                      ____________________________________________________________
consensus             TCTTCTGAGCTTCCTCTCCCATGGCTGATGGTGATCGGAAGTAATCACAGCCACTGGCCA
 
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JMSF030O23+           CTAAAGATTGAGTGATTGTGAAGAGAGATCATCAC                         
JMFN037A01+           CTAAAGATTGAGTGATTGTGAAGAGAGATCATCACAAGGGAGGAGGGAATTGAAGGGAAG
JMFF013H23+           CTAAAGATTGAGTGATTGTGAAGAGAGATCATCACAAGGGAGGAGGGAATTGAAGGGAAG
JMFN006J08+           CTAAAGATTGAGTGATTGTGAAGAGAGATCATCACAAGGGAGGAGGGAATTGAAGGGAAG
                      ____________________________________________________________
consensus             CTAAAGATTGAGTGATTGTGAAGAGAGATCATCACAAGGGAGGAGGGAATTGAAGGGAAG
 
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JMFN037A01+           AAGCTAAG                                                    
JMFF013H23+           AAGCTAAGAGGTTGGATTTAATAT                                    
JMFN006J08+           AAGCTAAGAGGTTGGATTTAATATGAAATGAGAGATGGAAGTTGAGTTAGAGAGAAGAAA
                      ____________________________________________________________
consensus             AAGCTAAGAGGTTGGATTTAATATGAAATGAGAGATGGAAGTTGAGTTAGAGAGAAGAAA
 
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JMFN006J08+           TATAGTCTAAATGTAGCCAATGATACGGCGACACGTCGAGGAATGGGTGTTGAAATTCAT
                      ____________________________________________________________
consensus             TATAGTCTAAATGTAGCCAATGATACGGCGACACGTCGAGGAATGGGTGTTGAAATTCAT