Contig 006115:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN001F04Sequence526006115 (2)ref|XP_008378047.1|1e-29PREDICTED: probable calcium-binding protein CML17 [Malus domestica]
JMFN012H16Sequence526006115 (2)ref|XP_008378047.1|1e-29PREDICTED: probable calcium-binding protein CML17 [Malus domestica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN012H16+ AGTCAAATTTAAACTATATATAATTATGACCTTAACAATTATATAT
JMFN001F04+ AGTCAAATTTAAACTATATATAATTATGACCTTAACAATTATATAT
                      ____________________________________________________________
consensus AGTCAAATTTAAACTATATATAATTATGACCTTAACAATTATATAT
 
. : . : . : . : . : . :
JMFN012H16+ TATACAAGAAAATCTTACATAAAGCTTAAATTTATAGTAAGCCAAAAAGTATTAACAAGG
JMFN001F04+ TATACAAGAAAATCTTACATAAAGCTTAAATTTATAGTAAGCCAAAAAGTATTAACAAGG
                      ____________________________________________________________
consensus TATACAAGAAAATCTTACATAAAGCTTAAATTTATAGTAAGCCAAAAAGTATTAACAAGG
 
. : . : . : . : . : . :
JMFN012H16+ CAACGTTACCTAATACATATTTTTGAAAAGTGACTGAAATTTTTTTCAGTCATAAAAAAG
JMFN001F04+ CAACGTTACCTAATACATATTTTTGAAAAGTGACTGAAATTTTTTTCAGTCATAAAAAAG
                      ____________________________________________________________
consensus CAACGTTACCTAATACATATTTTTGAAAAGTGACTGAAATTTTTTTCAGTCATAAAAAAG
 
. : . : . : . : . : . :
JMFN012H16+ AGCAAGTATTAATACGTGACAATCCGGATATTCAAGTTCATCTGCGCAAACTCCACCAAC
JMFN001F04+ AGCAAGTATTAATACGTGACAATCCGGATATTCAAGTTCATCTGCGCAAACTCCACCAAC
                      ____________________________________________________________
consensus AGCAAGTATTAATACGTGACAATCCGGATATTCAAGTTCATCTGCGCAAACTCCACCAAC
 
. : . : . : . : . : . :
JMFN012H16+ TTGTCAATCTCACAGTCGTCAATGAAGCCGTTACCGTTACCGTCAACCGCCTTCATCCCC
JMFN001F04+ TTGTCAATCTCACAGTCGTCAATGAAGCCGTTACCGTTACCGTCAACCGCCTTCATCCCC
                      ____________________________________________________________
consensus TTGTCAATCTCACAGTCGTCAATGAAGCCGTTACCGTTACCGTCAACCGCCTTCATCCCC
 
. : . : . : . : . : . :
JMFN012H16+ TTCCGGCCTTTGAGCCAGGAGAAGCGCACGCCGGCGGCACGGATGGCTTCCCGGAGCTCT
JMFN001F04+ TTCCGGCCTTTGAGCCAGGAGAAGCGCACGCCGGCGGCACGGATGGCTTCCCGGAGCTCT
                      ____________________________________________________________
consensus TTCCGGCCTTTGAGCCAGGAGAAGCGCACGCCGGCGGCACGGATGGCTTCCCGGAGCTCT
 
. : . : . : . : . : . :
JMFN012H16+ TCTCTGCTTATTCTGCCGTCTCTGTCGGCGTCAAATCTCCTAAACCACTTCTTGAACTCT
JMFN001F04+ TCTCTGCTTATTCTGCCGTCTCTGTCGGCGTCAAATCTCCTAAACCACTTCTTGAACTCT
                      ____________________________________________________________
consensus TCTCTGCTTATTCTGCCGTCTCTGTCGGCGTCAAATCTCCTAAACCACTTCTTGAACTCT
 
. : . : . : . : . : . :
JMFN012H16+ TCCAAAGTCATGTCAAGCTTGCCGTCGCTGTGAACGCTGCGTGCATAGTTCTTAATAGCC
JMFN001F04+ TCCAAAGTCATGTCAAGCTTGCCGTCGCTGTGAACGCTGCGTGCATAGTTCTTAATAGCC
                      ____________________________________________________________
consensus TCCAAAGTCATGTCAAGCTTGCCGTCGCTGTGAACGCTGCGTGCATAGTTCTTAATAGCC
 
. : . : . : . : . : . :
JMFN012H16+ ATATATATTTTCTCTGTTTTTCTTTTTTCTGCAGTGAAATGTACAGTGTGATTTTGCTTC
JMFN001F04+ ATATATATTTTCTCTGTTTTTCTTTTTTCTGCAGTGAAATGTACAGTGTGATTTTGCTTC
                      ____________________________________________________________
consensus ATATATATTTTCTCTGTTTTTCTTTTTTCTGCAGTGAAATGTACAGTGTGATTTTGCTTC