Contig 006090:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF021D22Sequence361006090 (5)171004141 (2)
JMFF047L22Sequence539006090 (5)gb|EYU25226.1|2e-21hypothetical protein MIMGU_mgv1a0032972mg, partial [Erythranthe guttata]490004141 (2)
JMFS017H07Sequence461006090 (5)
JMFS162D01Sequence345006090 (5)
JMFS164F07Sequence454006090 (5)gb|EYU25226.1|5e-13hypothetical protein MIMGU_mgv1a0032972mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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JMFS164F07+                                                   TTGACGGAAATGTGGACGAG
JMFS017H07+                                                                 GACGAG
JMFF047L22+            GCCATGTACAACGCCCGCCCGAACCGCTGGAGAGTCACGTTGACGGAAATGTGGACGAG
                      ____________________________________________________________
consensus              GCCATGTACAACGCCCGCCCGAACCGCTGGAGAGTCACGTTGACGGAAATGTGGACGAG
 
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JMFS164F07+           GTCGGTGTCCGACGCCGCTACCGGGCCGGGGAAATCCACGAGCGAGTTGACACAGAGACT
JMFS017H07+           GTCGGTGTCCGACGCCGCTACCGCGCCGGGGAAATCCACGAGCGAGTTGACACAGAGACT
JMFF047L22+           GTCGGTGTCCGACGCCGCTACCGCGCCGGGGAAATCCACGAGCGAGTTGACACAGAGACT
                      ____________________________________________________________
consensus             GTCGGTGTCCGACGCCGCTACCGCGCCGGGGAAATCCACGAGCGAGTTGACACAGAGACT
 
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JMFS164F07+           CGGGTACCGAGTCTTGCTACACGTCCGGGCAATGGCCTGAGTTGGNTTCGCCGTGATCCT
JMFS017H07+           CGGGNACCGAGTCCTGCGACACGGCCGGGCAANGGCNTGAGNNGGNNNNNCNGGATCNNN
JMFF047L22+           CGGGTACCGAGTCTTGCTACACGTCCGGGCAATGGCCTGAGTTGGCTTCGCCGTGATCCT
                      ____________________________________________________________
consensus             CGGGTACCGAGTCTTGCTACACGTCCGGGCAATGGCCTGAGTTGGCTTCGCCGTGATCCT
 
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JMFS164F07+           ATCCCCTTCCCCCTTCCCCCTCACCCCCACCAAAACCGCCACCGAAGCCGCGGCGGCAAC
JMFS017H07+           ATCCCCTTCCCCCTTCCCCCTCACCCCCACCAAAACCGCCACCGAAGCCGCGGCGGCAAC
JMFS162D01+                  TCCCCCTTCCCCCTCACCCCCACCAAAACCGCCACCGAAGCCGCGGCGGCAAC
JMFF021D22+                   CCCCTTTCCCCCTCACCCCCACCAAAACCGCCACCGAAGCCGCGGCGGCAAC
JMFF047L22+           ATCCCCTTCCCCCTTCCCCCTCACCCCCACCAAAACCGCCACCGAAGCCGCGGCGGCAAC
                      ____________________________________________________________
consensus             ATCCCCTTCCCCCTTCCCCCTCACCCCCACCAAAACCGCCACCGAAGCCGCGGCGGCAAC
 
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JMFS164F07+           GATGAGAACCGCCGCGAATATTACCAAACCCTTCACCTTCTTCCCCTTCCCGCCCCAAGA
JMFS017H07+           GATGAGAACCGCCGCGAATATTACCAAACCCTTCACCTTCTTCCCCTTCCCGCCCCAAGA
JMFS162D01+           GATGAGAACCGCCGCGAATATTACCAAACCCTTCACCTTCTTCCCCTTCCCGCCCCAAGA
JMFF021D22+           GATGAGAACCGCCGCGAATATTACCAAACCCTTCACCTTCTTCCCCTTCCCGCCCCAAGA
JMFF047L22+           GATGAGAACCGCCGCGAATATTACCAAACCCTTCACCTTCTTCCCCTTCCCGCCCCAAGA
                      ____________________________________________________________
consensus             GATGAGAACCGCCGCGAATATTACCAAACCCTTCACCTTCTTCCCCTTCCCGCCCCAAGA
 
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JMFS164F07+           CGCCGTCGCCCCGTCCGGCAAAATCTCCCGCCGCGACGCCGGCCCCACCGGTGACGATCC
JMFS017H07+           CGCCGTCGCCCCGTCCGGCAAAATCTCCCGCCGCGACGCCGGCCCCACCGGTGACGATCC
JMFS162D01+           CGCCGTCGCCCCGTCCGGCAAAATCTCCCGCCGCGACGCCGGCCCCACCGGTGACGATCC
JMFF021D22+           CGCCGTCGCCCCGTCCGGCAAAATCTCCCGCCGCGACGCCGGCCCCACCGGTGACGATCC
JMFF047L22+           CGCCGTCGCCCCGTCCGGCAAAATCTCCCGCCGCGACGCCGGCCCCACCGGTGACGATCC
                      ____________________________________________________________
consensus             CGCCGTCGCCCCGTCCGGCAAAATCTCCCGCCGCGACGCCGGCCCCACCGGTGACGATCC
 
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JMFS164F07+           GATCCTCCCATACTCCATTCCGTATCAAAATGCCGTTAGCCTCGGAGAAATTAAGGTTAT
JMFS017H07+           GATCCTCCCATACTCCATTCCGTATCAAAATGCCGTTAGCCTCGGAGAAATTAAGGTTAT
JMFS162D01+           GATCCTCCCATACTCCATTCCGTATCAAAATGCCGTTAGCCTCGGAGAAATTAAGGTTAT
JMFF021D22+           GATCCTCCCATACTCCATCCCGTATCAAAATGCCGTTAGCCTCGGAGAAATTAAGGTTAT
JMFF047L22+           GATCCTCCCATACTCCATTCCGTATCAAAATGCCGTTAGCCTCGGAGAAATTAAGGTTAT
                      ____________________________________________________________
consensus             GATCCTCCCATACTCCATTCCGTATCAAAATGCCGTTAGCCTCGGAGAAATTAAGGTTAT
 
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JMFS164F07+           TATTAAGAAAACAATTGCAAGAAGCCTCAGCTCGGAGAAAATAAGGTTATTACTGAAGTT
JMFS017H07+           TATTAAGAAAACAATTGCAAGAAGCCTCAGCTCGGAGAAAATAAGGTTATTACTGAAGTT
JMFS162D01+           TATTAAGAAAACAATTGCAAGAAGCCTCAGCTCGGAGAAAATAAGGTTATTACTGAAGTT
JMFF021D22+           TATTAAGAAAACAATTGCAAGAAGCCTCAGCTCGGAGAAAATAAGGTTATTACTGAAGTT
JMFF047L22+           TATTAAGAAAACAATTGCAAGAAGCCTCAGCTCGGAGAAAATAAGGTTATTACTGAAGTT
                      ____________________________________________________________
consensus             TATTAAGAAAACAATTGCAAGAAGCCTCAGCTCGGAGAAAATAAGGTTATTACTGAAGTT
 
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JMFS164F07+           ATTAAGGTAAGAAG                                              
JMFS017H07+           ATTAAGGTAAGAAGGGAGGAGTGAAATGAAATGAG                         
JMFS162D01+           ATTAAGGTAAGAAGGGAGGAGTGAAATGAAATGAGCATAGAGAGAAGGGGGT        
JMFF021D22+           ATTAAGGTAAGAAGGGAGGAGTGAAATGAAATGAGCATAGAGAGAAGGGGGTGGAAGTGC
JMFF047L22+           ATTAAGGTAAGAAGGGAGGAGTGAAATGAAATGAGCATAGAGAGAAGGGGGTGGAAGTGC
                      ____________________________________________________________
consensus             ATTAAGGTAAGAAGGGAGGAGTGAAATGAAATGAGCATAGAGAGAAGGGGGTGGAAGTGC