Contig 006089:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF022D05Sequence516006089 (10)ref|XP_011087396.1|3e-59PREDICTED: 60S ribosomal protein L31 [Sesamum indicum]498006089 (10)ref|XP_011087396.1|1e-58PREDICTED: 60S ribosomal protein L31 [Sesamum indicum]
JMFF047I21Sequence473006089 (10)ref|XP_011087396.1|1e-54PREDICTED: 60S ribosomal protein L31 [Sesamum indicum]343006089 (10)gb|KJB54304.1|1e-13hypothetical protein B456_009G029900 [Gossypium raimondii] gb|KJB54305.1| hypoth
JMFN002D04Sequence500006089 (10)ref|XP_010049572.1|135PREDICTED: 60S ribosomal protein L31 isoform X2 [Eucalyptus grandis] ref|XP_0100
JMSF001A01Sequence156006089 (10)ref|XP_011087396.1|4e-12PREDICTED: 60S ribosomal protein L31 [Sesamum indicum]551006089 (10)ref|XP_011087396.1|4e-59PREDICTED: 60S ribosomal protein L31 [Sesamum indicum]
JMSF036D14Sequence652006089 (10)ref|XP_011087396.1|1e-58PREDICTED: 60S ribosomal protein L31 [Sesamum indicum]600006089 (10)ref|XP_011087396.1|7e-59PREDICTED: 60S ribosomal protein L31 [Sesamum indicum]
JMSF042P10Sequence651006089 (10)ref|XP_011087396.1|6e-57PREDICTED: 60S ribosomal protein L31 [Sesamum indicum]520007093 (13)ref|XP_004233607.1|7e-87PREDICTED: probable esterase KAI2 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF047I21-                                                               TAAAAGG
JMSF036D14+                          CAGAGCTCAACAGTAGCATCAAATTCAAACCACAGATATAAAAGG
JMFN002D04+                          CAGAGCTCAACAGTAGCATCAAATTCAAACCACAGATATAAAAGG
JMSF042P10+                TTTTTTTTTCCAGAGCTCAACAGTAGCATCAAATTCAAACCACAGATATAAAAGG
                      ____________________________________________________________
consensus                  TTTTTTTTTCCAGAGCTCAACAGTAGCATCAAATTCAAACCACAGATATAAAAGG
 
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rJMSF036D14-            GAATGTAATGGACATAATAAGCATCTAACAAAGTTGAATCCATAAATAAGAAAAACAC
rJMFF047I21-          CAGAATGTAATGGACATAATAAGCATCTAACAAAGTT-AATCCATAAATAAGAAAAACAC
JMSF036D14+           CAGAATGTAATGGACATAATAAGCATCTAACAAAGTTGAATCCATAAATAAGAAAAACAC
JMFN002D04+           CAGAATGTAATGGACATAATAAGCATCTAACAAAGTTGAATCCATAAATAAGAAAAACAC
JMSF042P10+           CAGAATGTAATGGACATAATAAGCATCTAACAAAGTTGAATCCATAAATAAGAAAAACAC
rJMSF001A01-                                                        AATAAGAAAAACAC
                      ____________________________________________________________
consensus             CAGAATGTAATGGACATAATAAGCATCTAACAAAGTTGAATCCATAAATAAGAAAAACAC
 
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rJMFF022D05-                                                     AAATTAGAGTATTCAAC
JMFF022D05+                            AGGATGTGACAGAGTGATTGACTGCAAAATTAGAGTATTCAAC
rJMSF036D14-          CCAAACAACAAAGATCTAGGATGTGACAGAGTGATTGACTGCAAAATTAGAGTATTCAAC
rJMFF047I21-          CCAAACAACAAAGATCTAGGATGTGACAGAGTGATTGACTGCAAAATTAGAGTATTCAAC
JMSF036D14+           CCAAACAACAAAGATCTAGGATGTGACAGAGTGATTGACTGCAAAATTAGAGTATTCAAC
JMFN002D04+           CCAAACAACAAAGATCTAGGATGTGACAGAGTGATTGACTGCAAAATTAGAGTATTCAAC
JMSF042P10+           CCAAACAACAAAGATCTAGGATGTGACAGAGTGATTGACTGCAAAATTAGAGTATTCAAC
rJMSF001A01-          CCAAACAACAAAGATCTAGGATGTGACAGAGTGATTGACTGCAAAATTAGAGTATTCAAC
                      ____________________________________________________________
consensus             CCAAACAACAAAGATCTAGGATGTGACAGAGTGATTGACTGCAAAATTAGAGTATTCAAC
 
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rJMFF022D05-          AAACAAAACTGTAGATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
JMFF022D05+           AAACAAAACTGTAGATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
rJMSF036D14-          AAACAAAACTGTAGATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
rJMFF047I21-          AAACAAAACTGTACATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
JMSF036D14+           AAACAAAACTGTAGATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
JMFN002D04+           AAACAAAACTGTAGATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
JMSF042P10+           AAACAAAACTGTAGATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
rJMSF001A01-          AAACAAAACTGTAGATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
JMFF047I21+                                AAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
                      ____________________________________________________________
consensus             AAACAAAACTGTAGATGTATTAAAATCTCCTAGAGGATGTTATTCACTCTTCATCGTCGT
 
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rJMFF022D05-          CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
JMFF022D05+           CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
rJMSF036D14-          CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
rJMFF047I21-          CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
JMSF036D14+           CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
JMFN002D04+           CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
JMSF042P10+           CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
rJMSF001A01-          CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
JMFF047I21+           CAATGATTGCGGTACCCAAGCCCCTGAGTTCCCTCTGGGGGAATTTCGGCAACAGTGACC
                      ____________________________________________________________
consensus             CAATGATTGCGGTACCCAAGCCCTTGAG-TCCCTCTGGGGGAATTTCGGCAACAGTGACC
 
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rJMFF022D05-          AATGAGTAAAGCTCCTCCTTGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
JMFF022D05+           AATGAGTAAAGCTCCTCCTTGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
rJMSF036D14-          AATGAGTAAAGCTCCTCCTTGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
rJMFF047I21-          AATGAGTAAAGCTCCTCCATGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
JMSF036D14+           AATGAGTAAAGCTCCTCCTTGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
JMFN002D04+           AATGAGTAAAGCTCCTCCTTGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
JMSF042P10+           AATGAGTAAAGCTCCTCCTTGGCATNTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
rJMSF001A01-          AATGAGTAAAGCTCCTCCTTGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
JMFF047I21+           AATGAGTAAAGCTCCTCCTTGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
                      ____________________________________________________________
consensus             AATGAGTAAAGCTCCTCCTTGGCATCTTCGTCGTCATTTCTCTTTCGTGCAATGCGAACA
 
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rJMFF022D05-          CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
JMFF022D05+           CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
rJMSF036D14-          CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
rJMFF047I21-          CGAATTCTCCTTGGAACACTT                                       
JMSF036D14+           CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
JMFN002D04+           CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
JMSF042P10+           CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
rJMSF001A01-          CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
JMFF047I21+           CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
                      ____________________________________________________________
consensus             CGAATTCTCCTTGGAACACTTCGGATCCCTCGGCTCCAGATGTGTTTGTTGAGCTTCACA
 
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rJMFF022D05-          TCAACCCTANCATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
JMFF022D05+           TCAACCCTAACATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
rJMSF036D14-          TCAACCCTAACATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
JMSF036D14+           TCAACCCTAACATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
JMFN002D04+           TCAACCCTAACATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
JMSF042P10+           TCAACCCTAACATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
rJMSF001A01-          TCAACCCTAACATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
JMFF047I21+           TCAACCCTAACATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
                      ____________________________________________________________
consensus             TCAACCCTAACATCAGTTGTTCCCATTGCCTTTTGGGCAAACTTCCTGATTTCCTTTATA
 
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rJMFF022D05-          GCATTGGGAGCCTTCTTCTTGAAAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
JMFF022D05+           GCATTGGGAGCCTTCTTCTTGAAAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
rJMSF036D14-          GCATTGGGAGCCTTCTTCTTGAAAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
JMSF036D14+           GCATTGGGAGCCTTCTTCTTGAAAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
JMFN002D04+           GCATTGGGAGCCTTCTTCTTGAAA                                    
JMSF042P10+           GCATTGGGAGCCTTNTTCTTGAAAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
rJMSF001A01-          GCATTGGGAGCCTTCTTCTTGAAAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
JMSF001A01+                                 AAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
JMFF047I21+           GCATTGGGAGCCTTCTTCTTGAAAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
                      ____________________________________________________________
consensus             GCATTGGGAGCCTTCTTCTTGAAAGTGCATCCATGCAAGCGTTTATGGAGATTGATAGTG
 
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rJMFF022D05-          TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
JMFF022D05+           TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
rJMSF036D14-          TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
JMSF036D14+           TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
JMSF042P10+           TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
rJMSF001A01-          TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
JMSF001A01+           TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
JMFF047I21+           TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
                      ____________________________________________________________
consensus             TACTCTCTCGTGACGACCTCCTCCTTCCTGGCTTTGCTCCCCTTCTCCGCCATTGTAGCA
 
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rJMFF022D05-          GCTCCGCTTATCTCTCCCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTC      
JMFF022D05+           GCTCCGCTTATCTCTCCCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTC      
rJMSF036D14-          GCTCCGCTTATCTCTCTCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTC      
JMSF036D14+           GCTCCGCTTATCTCTCTCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTC      
JMSF042P10+           GCTCCGCTTATCTCTCTCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTCTCC   
rJMSF001A01-          GCTCCGCTTATCTCTCTCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTCTCC   
JMSF001A01+           GCTCCGCTTATCTCTCTCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTCTCC   
JMFF047I21+           GCTCCGCTTATCTCTCTCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTCTCCGGT
                      ____________________________________________________________
consensus             GCTCCGCTTATCTCTCTCTCTCCCGAACTCCTAGAGTTGCTCCGCTGCTATGTCTCCGGT