clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF026P15 | Sequence | 592 | 006087 (5) | ref|XP_004242723.1| | 4e-59 | PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum] | 583 | 019111 | ref|XP_009787853.1| | 156 | PREDICTED: uncharacterized protein LOC104235740 [Nicotiana sylvestris] |
JMFF047H11 | Sequence | 599 | 006087 (5) | ref|XP_004242723.1| | 2e-77 | PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum] | 608 | 008367 (2) | ref|XP_009621397.1| | 1e-10 | PREDICTED: NEDD8 ultimate buster 1 [Nicotiana tomentosiformis] |
JMFN038K03 | Sequence | 593 | 006087 (5) | ref|XP_009787853.1| | 273 | PREDICTED: uncharacterized protein LOC104235740 [Nicotiana sylvestris] | |||||
JMFS153F10 | Sequence | 605 | 006087 (5) | ref|XP_004242723.1| | 2e-90 | PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum] | |||||
JMSF028B16 | Sequence | 693 | 006087 (5) | ref|XP_004242723.1| | 9e-110 | PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum] | 771 | 008367 (2) | ref|XP_009621397.1| | 2e-20 | PREDICTED: NEDD8 ultimate buster 1 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFN038K03+ GAGAGGAGTCATTCCATAACACTTTTGCTCCCTGAAATTCATGGCA
____________________________________________________________
consensus GAGAGGAGTCATTCCATAACACTTTTGCTCCCTGAAATTCATGGCA
. : . : . : . : . : . :
JMFN038K03+ TACAAAGCTTAGAATTCTGAGCTAAACACAATGGAGGAAAATTTGAGATAACAAAATTCA
____________________________________________________________
consensus TACAAAGCTTAGAATTCTGAGCTAAACACAATGGAGGAAAATTTGAGATAACAAAATTCA
. : . : . : . : . : . :
JMFN038K03+ ACTAACAGGATCTCTCTTTGCCTACGAAGATCCTCATCCCGTTTGCTTGCTGCTTTCTCT
____________________________________________________________
consensus ACTAACAGGATCTCTCTTTGCCTACGAAGATCCTCATCCCGTTTGCTTGCTGCTTTCTCT
. : . : . : . : . : . :
JMFN038K03+ TTCTCCTCAACAAGAAAATTAACAGCACTTTGAACATCTTGATTGTTCATACGCAGTGCT
____________________________________________________________
consensus TTCTCCTCAACAAGAAAATTAACAGCACTTTGAACATCTTGATTGTTCATACGCAGTGCT
. : . : . : . : . : . :
JMFN038K03+ TTCTTTGCATCACCTTCTTTATAGCCCATGCTCAAAAGTAGCGACAGTGCTTCATCTGGA
____________________________________________________________
consensus TTCTTTGCATCACCTTCTTTATAGCCCATGCTCAAAAGTAGCGACAGTGCTTCATCTGGA
. : . : . : . : . : . :
JMFN038K03+ ATTTGAAGCTGGAAATATTTCGCTTGTGCAGAACTCAAAGACTGTCTAGCTTTTTCAAAC
____________________________________________________________
consensus ATTTGAAGCTGGAAATATTTCGCTTGTGCAGAACTCAAAGACTGTCTAGCTTTTTCAAAC
. : . : . : . : . : . :
JMFN038K03+ TGACCACTGTGATATCCAACGACTCCTTCTAACAGCTCCAGTCTTACATGTAGGGAAATC
____________________________________________________________
consensus TGACCACTGTGATATCCAACGACTCCTTCTAACAGCTCCAGTCTTACATGTAGGGAAATC
. : . : . : . : . : . :
JMFN038K03+ TCAGGATAGCGCCCCCCTTGAAGAAGTCTAACACGACTAGCTTCCTTCCCATGAGCACGC
____________________________________________________________
consensus TCAGGATAGCGCCCCCCTTGAAGAAGTCTAACACGACTAGCTTCCTTCCCATGAGCACGC
. : . : . : . : . : . :
JMFN038K03+ TCAAGCCCTTCCCTGGCTTTTGCAAGGCGGATGCCTGCAACTGAGAGCCAGCTGATGTCT
JMSF028B16+ GCAAGGCGGATGCCTGCAACTGAGAGCCAGCTGATGTCT
____________________________________________________________
consensus TCAAGCCCTTCCCTGGCTTTTGCAAGGCGGATGCCTGCAACTGAGAGCCAGCTGATGTCT
. : . : . : . : . : . :
JMFN038K03+ TGGAGCATAAAGTAACACCACACCAAATCTATTTGCAGAATGGCTACATTATCAACCATC
JMFS153F10+ TGCAGAATGGCTACATTATCAACCATC
JMSF028B16+ TGGAGCATAAAGTAACACCACACCAAATCTATTTGCAGAATGGCTACATTATCAACCATC
____________________________________________________________
consensus TGGAGCATAAAGTAACACCACACCAAATCTATTTGCAGAATGGCTACATTATCAACCATC
. : . : . : . : . : . :
JMFN038K03+ T
JMFS153F10+ TCAATAACTTTAGGATTGCAAAGAGAGAAGGCCTCCTCCCCCATGGTGAGAACCTCAAGT
JMSF028B16+ TCAATAACTTTAGGATTGCAAAGAGAGAAGGCCTCCTCCCCCATGGTGAGAACCTCAAGT
____________________________________________________________
consensus TCAATAACTTTAGGATTGCAAAGAGAGAAGGCCTCCTCCCCCATGGTGAGAACCTCAAGT
. : . : . : . : . : . :
JMFS153F10+ GCCTCTCTATATTGTTGCTTTCTGATCAATGCTTTGCCATTTGCATGAAGCATGAGACCC
JMSF028B16+ GCCTCTCTATATTGTTGCTTTCTGATCAATGCTTTGCCATTTGCATGAAGCATGAGACCC
____________________________________________________________
consensus GCCTCTCTATATTGTTGCTTTCTGATCAATGCTTTGCCATTTGCATGAAGCATGAGACCC
. : . : . : . : . : . :
JMFS153F10+ ATCATTATAGCCCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
JMSF028B16+ ATCATTATAGCCCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
JMFF026P15+ CCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
JMFF047H11+ CCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
____________________________________________________________
consensus ATCATTATAGCCCGCTGGTCAGTATCAGATCCAAACTGCAGTTTTTCTCCACTCTGATTT
. : . : . : . : . : . :
JMFS153F10+ TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
JMSF028B16+ TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
JMFF026P15+ TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
JMFF047H11+ TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
____________________________________________________________
consensus TCAAGTTCTAGGTTAAAGTCTTCTACAGGTAATGAACCTTCTGTATGTCTCTGGGCCAAT
. : . : . : . : . : . :
JMFS153F10+ GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
JMSF028B16+ GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
JMFF026P15+ GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
JMFF047H11+ GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
____________________________________________________________
consensus GACATAGCAGCAGTCTTGAGCCTTGAAAGTCTAGAAGAGCGTTCCTCTTCAGCCAGAGAT
. : . : . : . : . : . :
JMFS153F10+ TCCTCCTTGAAGGACTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
JMSF028B16+ TCCTCCTTGAAGGACTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
JMFF026P15+ TCCCCCTTGAAGGACTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
JMFF047H11+ TCCTCCTTGAAGGGCTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
____________________________________________________________
consensus TCCTCCTTGAAGGACTTGCCACGATCAGGAGAAACCTTGGAGGCCAAAACCTTCGCATTA
. : . : . : . : . : . :
JMFS153F10+ TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
JMSF028B16+ TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
JMFF026P15+ TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
JMFF047H11+ TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
____________________________________________________________
consensus TTTTTGACGCCCAATTGGGTGAGCTTCTCCGTACCGTCTCCGTCTTTCAGCAATTTTCCA
. : . : . : . : . : . :
JMFS153F10+ GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
JMSF028B16+ GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
JMFF026P15+ GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
JMFF047H11+ GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
____________________________________________________________
consensus GCACAGATGAGGTTTATGGTCTCCGGCGGCGCAACGCAGCCCGATCGCCGGATAACCTCT
. : . : . : . : . : . :
JMFS153F10+ TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
JMSF028B16+ TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
JMFF026P15+ TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
JMFF047H11+ TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
____________________________________________________________
consensus TCCCTAAGCATAGACACCGTCCACTCCTCCAGCTCTACCTCCAACACCCCACTCCATGCC
. : . : . : . : . : . :
JMFS153F10+ CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCT
JMSF028B16+ CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCTTCTCACAGAGTTTCTC
JMFF026P15+ CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCTTCTCACAGAGTTTCTC
JMFF047H11+ CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCTTCTCACAGAGTTTCTCCTCCGG
____________________________________________________________
consensus CCTGCTATCTTTAGCTTTGCCATACCCCCCATACTTCTTCTCACAGAGTTTCTCCTCCGG