Contig 006081:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009M18Sequence517006081 (9)emb|CDP02739.1|6e-35unnamed protein product [Coffea canephora]754001211 (9)gb|AAP69814.1|5e-99putative oxalyl-CoA decarboxylase, partial [Vitis vinifera]
JMFF024K11Sequence436006081 (9)ref|XP_010279424.1|6e-49PREDICTED: 2-hydroxyacyl-CoA lyase [Nelumbo nucifera]752001211 (9)gb|AAP69814.1|7e-72putative oxalyl-CoA decarboxylase, partial [Vitis vinifera]
JMFF025B12Sequence511006081 (9)ref|XP_009601559.1|6e-71PREDICTED: 2-hydroxyacyl-CoA lyase [Nicotiana tomentosiformis]767001211 (9)emb|CAN69570.1|1e-73hypothetical protein VITISV_044048 [Vitis vinifera]
JMFF034E03Sequence543006081 (9)ref|XP_004232017.1|5e-87PREDICTED: 2-hydroxyacyl-CoA lyase [Solanum lycopersicum]684001211 (9)gb|AAP69814.1|3e-89putative oxalyl-CoA decarboxylase, partial [Vitis vinifera]
JMFF039F21Sequence560006081 (9)ref|XP_010279424.1|4e-45PREDICTED: 2-hydroxyacyl-CoA lyase [Nelumbo nucifera]802001211 (9)gb|AAP69814.1|2e-102putative oxalyl-CoA decarboxylase, partial [Vitis vinifera]
JMFF046A08Sequence570006081 (9)emb|CDP02739.1|9e-32unnamed protein product [Coffea canephora]596001211 (9)emb|CBI33601.3|2e-38unnamed protein product [Vitis vinifera]
JMFN012D19Sequence611006081 (9)ref|XP_009601559.1|9e-96PREDICTED: 2-hydroxyacyl-CoA lyase [Nicotiana tomentosiformis]
JMSF014C07Sequence487006081 (9)ref|XP_009601559.1|2e-64PREDICTED: 2-hydroxyacyl-CoA lyase [Nicotiana tomentosiformis]787001211 (9)ref|XP_002266004.1|3e-111PREDICTED: 2-hydroxyacyl-CoA lyase [Vitis vinifera]
JMSF038N09Sequence607006081 (9)ref|XP_009601559.1|5e-91PREDICTED: 2-hydroxyacyl-CoA lyase [Nicotiana tomentosiformis]922001211 (9)ref|XP_004232017.1|2e-133PREDICTED: 2-hydroxyacyl-CoA lyase [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN012D19+                                                ATCCTGCGCTTCGGCGATCAATC
                      ____________________________________________________________
consensus                                                  ATCCTGCGCTTCGGCGATCAATC
 
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JMFN012D19+           TCTCCGCCTCCGATTCACTCACGGTCTGGTGGAGCACATCGGAGGGGAGATCCAAGTAAC
JMFF034E03+                                       GTGGAGCACATCGGAGGGGAGATCCAAGTAAC
JMSF038N09+                   TCCGATTCACTCACGGTCTGGTGGAGCACATCGGAGGGGAGATCCAAGTAAC
                      ____________________________________________________________
consensus             TCTCCGCCTCCGATTCACTCACGGTCTGGTGGAGCACATCGGAGGGGAGATCCAAGTAAC
 
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JMFN012D19+           ACCCGCCGGGGCGGCCGGCGGCAGCCCAATCCAGAACCTCGAAAACGCAAGCGGGGACTT
JMFF034E03+           ACCCGCCGGGGCGGCCGGCGGCGGCCCAATCCAGAACCTCGAAAACGCAAGCGGGGACTT
JMFF025B12+                                                     AAACGCAAGCGGGGACTT
JMSF038N09+           ACCCGCCGGGGCGGCCGGCGGCGGCCCAATCCAGAACCTCGAAAACGCAAGCGGGGACTT
                      ____________________________________________________________
consensus             ACCCGCCGGGGCGGCCGGCGGCGGCCCAATCCAGAACCTCGAAAACGCAAGCGGGGACTT
 
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JMFN012D19+           TGGAGATATCGGTGGCTTTAGCGGAGAACTTGGAGAAGGGTTTCACCGCTTCAATTTGGT
JMFF034E03+           TGGAGATATCGGTGGCTTTAGCGGAGAACTTGGAGAAGGGTTTCACCGCTCCAATTTGGT
JMFF025B12+           TGGAGATATCGGTGGCTTTAGCGGAGAACTTGGAGAAGGGTTTCACCGCTTCAATTTGGT
JMSF038N09+           TGGAGATATCGGTGGCTTTAGCGGAGAACTTGGAGAAGGGTTTCACCGCTTCAATTTGGT
JMFF024K11+                                                                     GT
JMSF014C07+                      GTGGCTTTAGCGGAGAACTTGGAGAAGGGTTTCACCGCTTCAATTTGGT
                      ____________________________________________________________
consensus             TGGAGATATCGGTGGCTTTAGCGGAGAACTTGGAGAAGGGTTTCACCGCTTCAATTTGGT
 
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JMFN012D19+           CCAGCTCTTGGAAGTCCCCGCG-CCCAAAATCTTTCTGATCGCAGGAGCCGGAAATCATG
JMFF034E03+           CCAGCTCTTGGAAGTCCCCGCG-CCCAAAATCTTTCTGATCGCAGGAGCCGGAAATCATG
JMFF025B12+           CCAGCTCTTGGAAGTCCCCGCG-CCCAAAATCTTTCTGATCGCAGGAGCCGGAAATCATG
JMSF038N09+           CCAGCTCTTGGAAGTCCCCGCG-CCCAAAATCTTTCTGATCGCAGGAGCCGGAAATCATG
JMFF024K11+           CCAGCTCTTGGAAGTCCCCGCGCCCCAAAATCTTTCTGATCGCAGGAGCCGGAAATCATG
JMSF014C07+           CCAGCTCTTGGAAGTCCCCGCG-CCCAAAATCTTTCTGATCGCAGGAGCCGGAAATCATG
JMFF039F21+                                             TCTGATCGCAGGAGCCGGAAATCATG
                      ____________________________________________________________
consensus             CCAGCTCTTGGAAGTCCCCGCG-CCCAAAATCTTTCTGATCGCAGGAGCCGGAAATCATG
 
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JMFN012D19+           ACCAACGGCCACGTATTCACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
JMFF034E03+           ACCAACGGCCACGTATTCACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
JMFF025B12+           ACCAACGGCCACGTATTCACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
JMSF038N09+           ACCAACGGCCACGTATTCACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
JMFF024K11+           ACCAACGGCCACGTATTCACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
JMSF014C07+           ACCAACGGCCACGTATTCACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
JMFF039F21+           ACCAACGGCCACGTATTCACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
JMFF009M18+                            CACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
JMFF046A08+                                         GAGAGGCCGGCGAGACCATGCACGCATCCG
                      ____________________________________________________________
consensus             ACCAACGGCCACGTATTCACGGCGGCGTTAGAGAGGCCGGCGAGACCATGCACGCATCCG
 
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JMFN012D19+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
JMFF034E03+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
JMFF025B12+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
JMSF038N09+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
JMFF024K11+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
JMSF014C07+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
JMFF039F21+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
JMFF009M18+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
JMFF046A08+           GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
                      ____________________________________________________________
consensus             GGTCCCGATACAGTGAGTAGAATCCCCGGTCGGCCGGTGAGGTAACCATAGGCGGAAGCA
 
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JMFN012D19+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
JMFF034E03+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
JMFF025B12+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
JMSF038N09+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
JMFF024K11+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
JMSF014C07+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
JMFF039F21+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
JMFF009M18+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
JMFF046A08+           GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
                      ____________________________________________________________
consensus             GCATAGCCGGCGGATTGCTCGTTGTGGAAGGCGATGAAGCGGATGCCAAGCGCCACCGCG
 
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JMFN012D19+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACTCCGGCT
JMFF034E03+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACTCCGGCT
JMFF025B12+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACTCCGGCT
JMSF038N09+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACTCCGGCT
JMFF024K11+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACTCCGGCT
JMSF014C07+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACTCCGGCT
JMFF039F21+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACCCCGGCT
JMFF009M18+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACCCCGGCT
JMFF046A08+           CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACTCCGGCT
                      ____________________________________________________________
consensus             CGGTTGGCTAAGGAAGTAACCGGTATGCCGACCACCCCGAACATCCGGTCCACTCCGGCT
 
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JMFN012D19+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
JMFF034E03+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
JMFF025B12+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
JMSF038N09+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
JMFF024K11+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
JMSF014C07+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
JMFF039F21+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
JMFF009M18+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
JMFF046A08+           CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
                      ____________________________________________________________
consensus             CGTGCCAGAGACATGGCCACAAGCATGTTGGTGTCGACGTCCGCCATTAAATTATCTCGG
 
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JMFN012D19+           AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCT           
JMFF034E03+           AAATGCACCACTACACTAGATTCACTGCCACT                            
JMFF025B12+           AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCTTCGATATAATA
JMSF038N09+           AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCTTCGATATAATA
JMFF024K11+           AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCTTCGATATAATA
JMSF014C07+           AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCTTCGATATAATA
JMFF039F21+           AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCTTCGATATAATA
JMFF009M18+           AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCTTCGATATAATA
JMFF046A08+           AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCTTCGATATAATA
                      ____________________________________________________________
consensus             AAATGCACCACTACACTAGATTCACTGCCACTGGGATTGCTTCAATTCTTCGATATAATA
 
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JMFF025B12+           ATATACTATCGGAT                                              
JMSF038N09+           ATATACTATCGGATT                                             
JMFF024K11+           ATATACTATCGGAT                                              
JMSF014C07+           ATATACTATCGGATTGGT                                          
JMFF039F21+           ATATACTATCGGATTGGTGATGTATAGCTTTAGCTTTAGCCTTTTATATATGCAAATTAG
JMFF009M18+           ATATACTATCGGATTGGTGATGTATAGCTTTAGCTTTAGCCTTTTATATATGCAAATTAG
JMFF046A08+           ATATACTATCGGATTGGTGATGTATAGCTTTAGCTTTAGCCTTTTATATATGCAAATTAG
                      ____________________________________________________________
consensus             ATATACTATCGGATTGGTGATGTATAGCTTTAGCTTTAGCCTTTTATATATGCAAATTAG
 
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JMFF039F21+           GACTTAGGAGCAAAAGTGCCTTCACCAAATATTCATCGTCTGGGCAACGGCAGCGTTTGG
JMFF009M18+           GACTTAGGAGCAAAAGTGCCTTCACCAAATATTCATCGTCTGGGCAACGGCAGCGTTTGG
JMFF046A08+           GACTTAGGAGCAAAAGTGCCTTCACCAAATATTCATCGTCTGGGCAACGGCAGCGTTTGG
                      ____________________________________________________________
consensus             GACTTAGGAGCAAAAGTGCCTTCACCAAATATTCATCGTCTGGGCAACGGCAGCGTTTGG
 
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JMFF039F21+           ATGGGAAGAAAGAAGCAAAATTTGATTGGCTCCACCGCCACACGCCACTC          
JMFF009M18+           ATGGGAAGAAAGAAGCAAAATTTGATTGGCTCCACCGCCACACGCCACTC          
JMFF046A08+           ATGGGAAGAAAGAAGCAAAATTTGATTGGCTCCACCGCCACACGCCACTCTATCAATGCT
                      ____________________________________________________________
consensus             ATGGGAAGAAAGAAGCAAAATTTGATTGGCTCCACCGCCACACGCCACTCTATCAATGCT
 
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JMFF046A08+           AAGCAAACTTTGCTTTGAACTCTTTTTTGAGCTTTTCTCACCTTGCAGCCTTGCTCTAAC
                      ____________________________________________________________
consensus             AAGCAAACTTTGCTTTGAACTCTTTTTTGAGCTTTTCTCACCTTGCAGCCTTGCTCTAAC