Contig 006072:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF011B23Sequence399006072 (3)ref|XP_006361724.1|6e-59PREDICTED: cellulose synthase A catalytic subunit 1 [UDP-forming] [Solanum tube714006172 (4)gb|AAO25536.1|3e-68cellulose synthase [Populus tremuloides]
JMFF037H11Sequence587006072 (3)emb|CBI21020.3|5e-99unnamed protein product [Vitis vinifera]630006172 (4)ref|XP_002515536.1|4e-64Cellulose synthase A catalytic subunit 6 [UDP-forming], putative [Ricinus commu
JMFF044H15Sequence647006072 (3)emb|CBI21020.3|3e-107unnamed protein product [Vitis vinifera]628006172 (4)gb|AAO25536.1|1e-50cellulose synthase [Populus tremuloides]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFF037H11+ CTTTCCCTTCCGAGTATCTGTTGGTTATTTGAGTCATACTTTTCTCCTGT
JMFF044H15+ TTTTCTCCTGT
                      ____________________________________________________________
consensus CTTTCCCTTCCGAGTATCTGTTGGTTATTTGAGTCATACTTTTCTCCTGT
 
. : . : . : . : . : . :
JMFF037H11+ TTAAGTTTCCAACCTTCTACTCTCTCTTTCCAGTCAACACTACCAAGCCCGTAAGAATTC
JMFF044H15+ NTAAGTTTCCAACCTTCTACTCTCTCTTTCCAGTCAACACTACCAAGCCCGTAAGAATTC
                      ____________________________________________________________
consensus TTAAGTTTCCAACCTTCTACTCTCTCTTTCCAGTCAACACTACCAAGCCCGTAAGAATTC
 
. : . : . : . : . : . :
JMFF037H11+ AAGTCCTTTGAAGGGTCCACAATTCTCACAGGAACTGGTTGCCTCGGGTCAAGGTATGGT
JMFF044H15+ AAGTCCTTTGAAGGGTCCACAATTCTCACAGGAACTGGTTGCCTCGGGTCAAGGTATGGT
                      ____________________________________________________________
consensus AAGTCCTTTGAAGGGTCCACAATTCTCACAGGAACTGGTTGCCTCGGGTCAAGGTATGGT
 
. : . : . : . : . : . :
JMFF037H11+ AGGGAGTGGCCATGCTTGTCTCCGGGGCCCAGAGGTCCTGACATACTTCTTATAGATTGA
JMFF011B23+ CCCAGAGGTCCTGACATACTTCTTATAGATTGA
JMFF044H15+ AGGGAGTGGCCATGCTTGTCTCCGGGGCCCAGAGGTCCTGACATACTTCTTATAGATTGA
                      ____________________________________________________________
consensus AGGGAGTGGCCATGCTTGTCTCCGGGGCCCAGAGGTCCTGACATACTTCTTATAGATTGA
 
. : . : . : . : . : . :
JMFF037H11+ GTATCTGGTGTTGCACTTAGAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGA
JMFF011B23+ GTATCTGGTGTTGCACTTAGAGGGATTTCNCCAGAGATTGGCTGCCCATTNGTCAGAAGA
JMFF044H15+ GTATCTGGTGTTGCACTTAGAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGA
                      ____________________________________________________________
consensus GTATCTGGTGTTGCACTTAGAGGGATTTCACCAGAGATTGGCTGCCCATTTGTCAGAAGA
 
. : . : . : . : . : . :
JMFF037H11+ GGAATTGGTTGGTGAGATTCATGTCTAGAGGACGAAGAGAGATCAACATCTTCTCCCTGC
JMFF011B23+ GGAATTGGTTGGTGAGATTCATGTCTAGAGGACGAAGAGAGATCAACATCTTCTCCCTGC
JMFF044H15+ GGAATTGGTTGGTGAGATTCATGTCTAGAGGACGAAGAGAGATCAACATCTTCTCCCTGC
                      ____________________________________________________________
consensus GGAATTGGTTGGTGAGATTCATGTCTAGAGGACGAAGAGAGATCAACATCTTCTCCCTGC
 
. : . : . : . : . : . :
JMFF037H11+ CACTTCCGTCTAGCCTTGACATTTCCTTCGCCATAATTGAACTCATTGACAAGGTCGTCA
JMFF011B23+ CACTTCCGTCTAGCCTTGACATTTCCTTCGCCATAATTGAACTCATTGACAAGGTCGTCA
JMFF044H15+ CACTTCCGTCTAGCCTTGACATTTCCTTCGCCATAATTGAACTCATTGACAAGGTCGTCA
                      ____________________________________________________________
consensus CACTTCCGTCTAGCCTTGACATTTCCTTCGCCATAATTGAACTCATTGACAAGGTCGTCA
 
. : . : . : . : . : . :
JMFF037H11+ ACATCCTCCTCCTCATCATCACCGTCAACTCGTGGGCTCCCTTTAAGCCTCTTGTATCGG
JMFF011B23+ ACATCCTCCTCCTCATCATCACCGTCAACTCGTGGGCTCCCTTTAAGCCTCTTGTATCGG
JMFF044H15+ ACATCCTCCTCCTCATCATCACCGTCAACTCGTGGGCTCCCTTTAAGCCTCTTGTATCGG
                      ____________________________________________________________
consensus ACATCCTCCTCCTCATCATCACCGTCAACTCGTGGGCTCCCTTTAAGCCTCTTGTATCGG
 
. : . : . : . : . : . :
JMFF037H11+ GTCTTGCACTGGGGGCATGCTTGGTTCCCATCTTTGCGTTCATACTCATAACAAGTCCGA
JMFF011B23+ GTCTTGCACTGGGGGCATGCTTGGTTCCCATCTTTGCGTTCATACTCATAACAAGTCCGA
JMFF044H15+ GTCTTGCACTGGGGGCATGCTTGGTTCCCATCTTTGCGTTCATACTCATAACAAGTCCGA
                      ____________________________________________________________
consensus GTCTTGCACTGGGGGCATGCTTGGTTCCCATCTTTGCGTTCATACTCATAACAAGTCCGA
 
. : . : . : . : . : . :
JMFF037H11+ CAAACAGGAAAGGCACACTCATTACAAGCAACAAATATATCACCATTAGCAGTCACC
JMFF011B23+ CAAACAGGAAAGGCACACTCATTACAAGCAACAAATATATCACCATTAGCAGTCACC
JMFF044H15+ CAAACAGGAAAGGCACACTCATTACAAGCAACAAATATATCACCATTAGCAGTCACCCGG
                      ____________________________________________________________
consensus CAAACAGGAAAGGCACACTCATTACAAGCAACAAATATATCACCATTAGCAGTCACCCGG