Contig 006051:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF017H14Sequence601006051 (2)ref|XP_006827209.1|5e-46hypothetical protein AMTR_s00010p00259410 [Amborella trichopoda] gb|ERM94446.1| 745010329 (15)ref|XP_010258379.1|6e-68PREDICTED: ATP-dependent 6-phosphofructokinase 5, chloroplastic-like isoform X1
JMFF040D05Sequence604006051 (2)ref|XP_006827209.1|1e-46hypothetical protein AMTR_s00010p00259410 [Amborella trichopoda] gb|ERM94446.1| 798010329 (15)ref|XP_010258381.1|5e-109PREDICTED: ATP-dependent 6-phosphofructokinase 5, chloroplastic-like isoform X2

Alignment

This contig is upended


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JMFF017H14+                                                                      C
JMFF040D05+                                                                   AAAC
                      ____________________________________________________________
consensus                                                                     AAAC
 
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JMFF017H14+           AATTGCAGCTTTCACTTCATCAGGTTCAAAGTATATGTGCCTACGCGGCCCCGCACGAGG
JMFF040D05+           AATTGCAGCTTTCACTTCATCAGGTTCAAAGTATATGTGCCTACGCGGCCCCGCACGAGG
                      ____________________________________________________________
consensus             AATTGCAGCTTTCACTTCATCAGGTTCAAAGTATATGTGCCTACGCGGCCCCGCACGAGG
 
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JMFF017H14+           CACCCATAGCTCCAACCAACTACAGTTTGGATCAACCCCTTCAGCCCCAGCAGAAGTGGG
JMFF040D05+           CACCCATAGCTCCAACCAACTACAGTTTGGATCAACCCCTTCAGCCCCAGCAGAAGTGGG
                      ____________________________________________________________
consensus             CACCCATAGCTCCAACCAACTACAGTTTGGATCAACCCCTTCAGCCCCAGCAGAAGTGGG
 
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JMFF017H14+           GGAAGCATACTTAATCACCTTCAACAGCGCTCTATCTGCATCATCCACGTAACTATGCTT
JMFF040D05+           GGAAGCATACTTAATCACCTTCAACAGCGCTCTATCTGCATCATCCACGTAACTATGCTT
                      ____________________________________________________________
consensus             GGAAGCATACTTAATCACCTTCAACAGCGCTCTATCTGCATCATCCACGTAACTATGCTT
 
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JMFF017H14+           CTGTTCATCAAACACATCGATGCCATTTCGGGTGGGATGAACACCTCTGTTGCTTAAGGA
JMFF040D05+           CTGTTCATCAAACACATCGATGCCATTTCGGGTGGGATGAACACCTCTGTTGCTTAAGGA
                      ____________________________________________________________
consensus             CTGTTCATCAAACACATCGATGCCATTTCGGGTGGGATGAACACCTCTGTTGCTTAAGGA
 
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JMFF017H14+           GAATGTGGTAGGCCTTGGCTTTGCATCAAACGTGTCTTTCAAATGCGGCAAACTGAATCT
JMFF040D05+           GAATGTGGTAGGCCTTGGCTTTGCATCAAACGTGTCTTTCAAATGCGGCAAACTGAATCT
                      ____________________________________________________________
consensus             GAATGTGGTAGGCCTTGGCTTTGCATCAAACGTGTCTTTCAAATGCGGCAAACTGAATCT
 
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JMFF017H14+           GGCTTCAAACTCCTCCTGGTACTTCTTCTTCCATTCCGGGTCGTTGAAATCTACTCCTTT
JMFF040D05+           GGCTTCAAACTCCTCCTGGTACTTCTTCTTCCATTCCGGGTCGTTGAAATCTACTCCTTT
                      ____________________________________________________________
consensus             GGCTTCAAACTCCTCCTGGTACTTCTTCTTCCATTCCGGGTCGTTGAAATCTACTCCTTT
 
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JMFF017H14+           CTTTTCACATGAAACTCTGCAATAATTAAATTTGGGTTTCACGACGCACCTTCCTCCTCG
JMFF040D05+           CTTTTCACATGAAACTCTGCAATAATTAAATTTGGGTTTCACGACGCACCTTCCTCCTCG
                      ____________________________________________________________
consensus             CTTTTCACATGAAACTCTGCAATAATTAAATTTGGGTTTCACGACGCACCTTCCTCCTCG
 
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JMFF017H14+           TCCATACCCGTTCCTGGTCGGCGAGTGGGTGAGAAAACAAGAACTGAAGGAAGAAGAAAC
JMFF040D05+           TCCATACCCGTTCCTGGTCGGCGAGTGGGTGAGAAAACAAGAACTGAAGGAAGAAGAAAC
                      ____________________________________________________________
consensus             TCCATACCCGTTCCTGGTCGGCGAGTGGGTGAGAAAACAAGAACTGAAGGAAGAAGAAAC
 
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JMFF017H14+           AATAATGGCGGCCATTAATATTATATTATATTTCTCCGATCCACTGGTACGGTACGGTGA
JMFF040D05+           AATAATGGCGGCCATTAATATTATATTATATTTCTCCGATCCACTGGTACGGTACGGTGA
                      ____________________________________________________________
consensus             AATAATGGCGGCCATTAATATTATATTATATTTCTCCGATCCACTGGTACGGTACGGTGA
 
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JMFF017H14+           TGAGTGATCAATGGAATGAGAGATAGATTATTTAGATCCCATCATTTGTTTGTTGATATT
JMFF040D05+           TGAGTGATCAATGGAATGAGAGATAGATTATTTAGATCCCATCATTTGTTTGTTGATATT
                      ____________________________________________________________
consensus             TGAGTGATCAATGGAATGAGAGATAGATTATTTAGATCCCATCATTTGTTTGTTGATATT