Contig 006047:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007K23Sequence616006047 (7)ref|XP_009605315.1|9e-112PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis]523011086 (5)ref|XP_009783888.1|1e-26PREDICTED: protein transport protein SEC24 [Nicotiana sylvestris]
JMFF008P07Sequence618006047 (7)ref|XP_009605315.1|2e-112PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis]251011086 (5)
JMFF010M19Sequence521006047 (7)ref|XP_009605315.1|2e-93PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis]704011086 (5)ref|XP_008360906.1|239PREDICTED: uncharacterized protein LOC103424589 [Malus domestica]
JMFF028I23Sequence500006047 (7)ref|XP_009605315.1|1e-85PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis]705011086 (5)gb|KDO58106.1|3e-64hypothetical protein CISIN_1g0053622mg, partial [Citrus sinensis]
JMFF039C21Sequence307006047 (7)ref|XP_009605315.1|5e-55PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis]572011086 (5)gb|KDO58106.1|2e-41hypothetical protein CISIN_1g0053622mg, partial [Citrus sinensis]
JMFS169D09Sequence591006047 (7)ref|XP_009605315.1|1e-108PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis]
JMSF032I02Sequence664006047 (7)ref|XP_009605315.1|6e-122PREDICTED: protein transport protein Sec24B [Nicotiana tomentosiformis]

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF032I02+ CTCAAGTGCAGA
                      ____________________________________________________________
consensus CTCAAGTGCAGA
 
. : . : . : . : . : . :
JMFF008P07+ GAAATGAAGATAAGGGCATGACATC
JMFF007K23+ GAAATGAAGATAAGGGCATGACATC
JMFS169D09+ AGGGCATGACATC
JMSF032I02+ TGCAATGCGGTCTTTGAATGTATCCACAGGAGCTAGAAATGAAGATAAGGGCATGACATC
                      ____________________________________________________________
consensus TGCAATGCGGTCTTTGAATGTATCCACAGGAGCTAGAAATGAAGATAAGGGCATGACATC
 
. : . : . : . : . : . :
JMFF008P07+ CGCAAGTTCCATTGGCAAGGTACCATCAGATTCCGGGGGAATAAACACATTCTTCACTAC
JMFF007K23+ CGCAAGTTCCATTGGCAAGGTACCATCAGATTCCGGGGGAATAAACACATTCTTCACTAC
JMFS169D09+ CGCAAGTTCCATTGGCAAGGTACCATCAGATTCCGGGGGAATAAACACATTCTTCACTAC
JMSF032I02+ CGCAAGTTCCATTGGCAAGGTACCATCAGATTCCGGGGGAATAAACACATTCTTCACTAC
                      ____________________________________________________________
consensus CGCAAGTTCCATTGGCAAGGTACCATCAGATTCCGGGGGAATAAACACATTCTTCACTAC
 
. : . : . : . : . : . :
JMFF008P07+ TGGAATTGGTCCTTGAACATCATATAAACCAATTTTATGGCTGAAGGTAGCAAGGCCAAA
JMFF007K23+ TGGAATTGGTCCTTGAACATCATATAAACCAATTTTATGGCTGAAGGTAGCAAGGCCAAA
JMFS169D09+ TGGAATTGGTCCTTGAACATCATATAAACCAATTTTATGGCTGAAGGTAGCAAGGCCAAA
JMFF010M19+ CCTTGAACATCATATAAACCAATTTTATGGCTGAAGGTAGCAAGGCCAAA
JMSF032I02+ TGGAATTGGTCCTTGAACATCATATAAACCAATTTTATGGCTGAAGGTAGCAAGGCCAAA
JMFF028I23+ CTGAAGGTAGCAAGGCCAAA
                      ____________________________________________________________
consensus TGGAATTGGTCCTTGAACATCATATAAACCAATTTTATGGCTGAAGGTAGCAAGGCCAAA
 
. : . : . : . : . : . :
JMFF008P07+ TAGTGACCCAGGCCCAAGACCTTCCAAAGCTGCCAGAAGAGCACTTTTGACAAGTTCCAA
JMFF007K23+ TAGTGACCCAGGCCCAAGACCTTCCAAAGCTGCCAGAAGAGCACTTTTGACAAGTTCCAA
JMFS169D09+ TAGTGACCCAGGCCCAAGACCTTCCAAAGCTGCCAGAAGAGCACTTTTGACAAGTTCCAA
JMFF010M19+ TAGTGACCCAGGCCCAAGACCTTCCAAAGCTGCCAGAAGAGCACTTTTGACAAGTTCCAA
JMSF032I02+ TAGTGACCCAGGCCCAAGACCTTCCAAAGCTGCCAGAAGAGCACTTTTGACAAGTTCCAA
JMFF028I23+ TAGTGACCCAGGCCCAAGACCTTCCAAAGCTGCCAGAAGAGCACTTTTGACAAGTTCCAA
                      ____________________________________________________________
consensus TAGTGACCCAGGCCCAAGACCTTCCAAAGCTGCCAGAAGAGCACTTTTGACAAGTTCCAA
 
. : . : . : . : . : . :
JMFF008P07+ AAATTCCTCCGAGGAAGCAAGATCAACAGCCGCCACATACACCGGCCGCGCCTGCATTTC
JMFF007K23+ AAATTCCTCCGAGGAAGCAAGATCAACAGCCGCCACATACACCGGCCGCGCCTGCATTTC
JMFS169D09+ AAATTCCTCCGAGGAAGCAAGATCAACAGCCGCCACATACACCGGCCGCGCCTGCATTTC
JMFF010M19+ AAATTCCTCCGAGGAAGCAAGATCAACAGCCGCCACATACACCGGCCGCGCCTGCATTTC
JMSF032I02+ AAATTCCTCCGAGGAAGCAAGATCAACAGCCGCCACATACACCGGCCGCGCCTGCATTTC
JMFF028I23+ AAATTCCTCCGAGGAAGCAAGATCAACAGCCGCCACATACACCGGCCGCGCCTGCATTTC
                      ____________________________________________________________
consensus AAATTCCTCCGAGGAAGCAAGATCAACAGCCGCCACATACACCGGCCGCGCCTGCATTTC
 
. : . : . : . : . : . :
JMFF008P07+ CTCAGATCCTTCCAAGGGCAATTCAAGGTCAATGAAGGAGGACATGTTCTCGGGGCAGGA
JMFF007K23+ CTCAGATCCTTCCAAGGGCAATTCAAGGTCAATGAAGGAGGACATGTTCTCGGGGCAGGA
JMFS169D09+ CTCAGATCCTTCCAAGGGCAATTCAAGGTCAATGAAGGAGGACATGTTCTCGGGGCAGGA
JMFF010M19+ CTCAGATCCTTCCAAGGGCAATTCAAGGTCAATGAAGGAGGACATGTTCTCGGGGCAGGA
JMSF032I02+ CTCAGATCCTTCCAAGGGCAATTCAAGGTCAATGAAGGAGGACATGTTCTCGGGGCAGGA
JMFF028I23+ CTCAGATCCTTCCAAGGGCAATTCAAGGTCAATGAAGGAGGACATGTTCTCGGGGCAGGA
JMFF039C21+ GGCAGGA
                      ____________________________________________________________
consensus CTCAGATCCTTCCAAGGGCAATTCAAGGTCAATGAAGGAGGACATGTTCTCGGGGCAGGA
 
. : . : . : . : . : . :
JMFF008P07+ ATCAGGGAGGGAGTAGCGAGCGATGGCCTGGGAAGGGAGGCCATTGAGGGTCCCACAGAG
JMFF007K23+ ATCAGGGAGGGAGTAGCGAGCGATGGCCTGGGAAGGGAGNCCATTGAGGGTCCCACAGAG
JMFS169D09+ ATCAGGGAGGGAGTAGCGAGCGATGGCCTGGGAAGGGAGGCCATTGAGGGTCCCACAGAG
JMFF010M19+ ATCAGGGAGGGAGTAGCGAGCGATGGCCTGGGAAGGGAGGCCATTGAGGGTCCCACAGAG
JMSF032I02+ ATCAGGGAGGGAGTAGCGAGCGATGGCCTGGGAAGGGAGGCCATTGAGGGTCCCACAGAG
JMFF028I23+ ATCAGGGAGGGAGTAGCGAGCGATGGCCTGGGAAGGGAGGCCATTGAGGGTCCCACAGAG
JMFF039C21+ ATCAGGGAGGGAGTAGCGAGCGATGGCCTGGGAAGGGAGGCCATTGAGGGTCCCACAGAG
                      ____________________________________________________________
consensus ATCAGGGAGGGAGTAGCGAGCGATGGCCTGGGAAGGGAGGCCATTGAGGGTCCCACAGAG
 
. : . : . : . : . : . :
JMFF008P07+ AGCGCAGGTCCACGCCCACTGCTCCTGCTCGCAGTAGGTGTTGTAGTATGCCCAGCAGTT
JMFF007K23+ AGCGCAGGTCCACGCCCACTGCTCCTGCTCGCAGTAGGTGTTGTAGTATGCCCAGCAGTT
JMFS169D09+ AGCGCAGGTCCACGCCCACTGCTCCTGCTCGCAGTAGGTGTTGTAGTATGCCCAGCAGTT
JMFF010M19+ AGCGCAGGTCCACGCCCACTGCTCCTGCTCGCAGTAGGTGTTGTAGTATGCCCAGCAGTT
JMSF032I02+ AGCGCAGGTCCACGCCCACTGCTCCTGCTCGCAGTAGGTGTTGTAGTATGCCCAGCAGTT
JMFF028I23+ AGCGCAGGTCCACGCCCACTGCTCCTGCTCGCAGTAGGTGTTGTAGTATGCCCAGCAGTT
JMFF039C21+ AGCGCAGGTCCACGCCCACTGCTCCTGCTCGCAGTAGGTGTTGTAGTATGCCCAGCAGTT
                      ____________________________________________________________
consensus AGCGCAGGTCCACGCCCACTGCTCCTGCTCGCAGTAGGTGTTGTAGTATGCCCAGCAGTT
 
. : . : . : . : . : . :
JMFF008P07+ CTCGCACCGCGGCAAGAGGTGGCCGTCCGATCCGTACACCGGCGGATTGCCGTTCTCGTC
JMFF007K23+ CTCGCACCGCGGCAAGAGGTGGCCGTCCGATCCGTACACCGGCGGATTGCCGTTCTCGTC
JMFS169D09+ CTCGCACCGCGGCAAGAGGTGGCCGTCCGATCCGTACACCGGCGGATTGCCGTTCTCGTC
JMFF010M19+ CTCGCACCGCGGCAAGAGGTGGCCGTCCGATCCGTACACCGGCGGATTGCCGTTCTCGTC
JMSF032I02+ CTCGCACCGCGGCAAGAGGTGGCCGTCCGATCCGTACACCGGCGGATTGCCGTTCTCGTC
JMFF028I23+ CTCGCACCGCGGCAAGAGGTGGCCGTCCGATCCGTACACCGGCGGATTGCCGTTCTCGTC
JMFF039C21+ CTCGCACCGCGGCAAGAGGTGGCCGTCCGATCCGTACACCGGCGGATTGCCGTTCTCGTC
                      ____________________________________________________________
consensus CTCGCACCGCGGCAAGAGGTGGCCGTCCGATCCGTACACCGGCGGATTGCCGTTCTCGTC
 
. : . : . : . : . : . :
JMFF008P07+ CTTGGCGGCGAACGGCGTCAACGTCACCCCCCACGGCAACCCCGCCACCTCCAGGGCGTC
JMFF007K23+ CTTGGCGGCGAACGGCGTCAACGTCACCCCCCACGGCAACCCCGCCACCTCCAGGGCGTC
JMFS169D09+ CTTGGCGGCGAACGGCGTCAACGTCACCCCCCACGGCAACCCCGCCACCTCCAGGGCGTC
JMFF010M19+ CTTGGCGGCGAACGGCGTCAACGTCACCCCCCACGGCAACCCCGCCACCTCCAGGGCGTC
JMSF032I02+ CTTGGCGGCGAACGGCGTCAACGTCACCCCCCACGGCAACCCCGCCACCTCCAGGGCGTC
JMFF028I23+ CTTGGCGGCGAACGGCGTCAACGTCACCCCCCACGGCAACCCCGCCACCTCCAGGGCGTC
JMFF039C21+ CTTGGCGGCGAACGGCGTCAACGTCACCCCCCACGGCAACCCCGCCACCTCCAGGGCGTC
                      ____________________________________________________________
consensus CTTGGCGGCGAACGGCGTCAACGTCACCCCCCACGGCAACCCCGCCACCTCCAGGGCGTC
 
. : . : . : . : . : . :
JMFF008P07+ GGGGTCGCCGGGGAATCGATTCACACTTGCACGCACCGCCATTGCGCA
JMFF007K23+ GGGGTCGCCGGGGAATCGATTCACACTTGCACGCACCGCCATTGCGCAGTT
JMFS169D09+ GGGGTCGCCGGGGAATCGATTCACACTTGCACGCACCG
JMFF010M19+ GGGGTCGCCGGGGAATCGATTCACACTTGCACGCACCGCCATTGCGCAGTT
JMSF032I02+ GGGGTCGCCGGGGAATCGATTCACACTTGCACGCACCGCCATTGCGCAGTT
JMFF028I23+ GGGGTCGCCGGGGAATCGATTCACACTTGCACGCACCGCCATTGCGCAGTTGATAGAAAT
JMFF039C21+ GGGGTCGCCGGGGAATCGATTCACACTTGCACGCACCGCCATTGCGCAGTTGATAGAAAT
                      ____________________________________________________________
consensus GGGGTCGCCGGGGAATCGATTCACACTTGCACGCACCGCCATTGCGCAGTTGATAGAAAT