Contig 006038:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037H07Sequence500006038 (4)ref|XP_010262413.1|2e-55PREDICTED: DAG protein, chloroplastic [Nelumbo nucifera]706006038 (4)ref|XP_006364567.1|9e-96PREDICTED: uncharacterized protein At3g15000, mitochondrial-like [Solanum tuber
JMFF043C05Sequence626006038 (4)ref|XP_009775265.1|5e-93PREDICTED: DAG protein, chloroplastic-like [Nicotiana sylvestris]598006038 (4)ref|XP_004240482.1|3e-70PREDICTED: DAG protein, chloroplastic-like [Solanum lycopersicum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF043C05- ACCCTGGAGGAGTTTTTTTTTTTTTTTTGTAA
rJMFF037H07- AA
                      ____________________________________________________________
consensus ACCCTGGAGGAGTTTTTTTTTTTTTTTTGTAA
 
. : . : . : . : . : . :
rJMFF043C05- CAGTTGTAACTTCACATTCTTAAAGATAAGCTCAGCCATACAACTATAAAGACATCAATA
rJMFF037H07- CAGTTGTAACTTCACATTCTTAAAGATAAGCTCAGCCATACAACTATAAAGACATCAATA
                      ____________________________________________________________
consensus CAGTTGTAACTTCACATTCTTAAAGATAAGCTCAGCCATACAACTATAAAGACATCAATA
 
. : . : . : . : . : . :
rJMFF043C05- CCACAGGCAGGCTGACATATGTCAAAGAATTCTCTTCTTTATCAGTAACAGACATTTCCC
rJMFF037H07- CCACAGGCAGGCTGACATATGTCAAAGAATTCTCTTCTTTATCAGTAACAGACATTTCCC
                      ____________________________________________________________
consensus CCACAGGCAGGCTGACATATGTCAAAGAATTCTCTTCTTTATCAGTAACAGACATTTCCC
 
. : . : . : . : . : . :
rJMFF043C05- CCCACTTAAATTATATCAAAGAATTCTCTTCTTTCATGCATTCTCTAACTTTCACCTTGT
rJMFF037H07- CCCACTTAAATTATATCAAAGAATTCTCTTCTTTCATGCATTCTCTAACTTTCACCTTGT
                      ____________________________________________________________
consensus CCCACTTAAATTATATCAAAGAATTCTCTTCTTTCATGCATTCTCTAACTTTCACCTTGT
 
. : . : . : . : . : . :
rJMFF043C05- ATTCTCGCGGCGCCTTACATAACGTGTCCGGTCATTATACCTAGGTCTATCTTGTGCTCT
rJMFF037H07- ATTCTCGCGGCGCCTTACATAACGTGTCCGGTCATTATACCTAGGTCTATCTTGTGCTCT
                      ____________________________________________________________
consensus ATTCTCGCGGCGCCTTACATAACGTGTCCGGTCATTATACCTAGGTCTATCTTGTGCTCT
 
. : . : . : . : . : . :
rJMFF043C05- CTGTGGTACTGGCTCCACCCTCTTCTGTTTTTCAGGTGACCTTTGCACGATTTCTCCGTT
rJMFF037H07- CTGTGGTACTGGCTCCACCCTCTTCTGTTTTTCAGGTGACCTTTGCACGATTTCTCCGTT
JMFF043C05+ AGGTGACCTTTGCACGATTTCTCCGTT
                      ____________________________________________________________
consensus CTGTGGTACTGGCTCCACCCTCTTCTGTTTTTCAGGTGACCTTTGCACGATTTCTCCGTT
 
. : . : . : . : . : . :
rJMFF043C05- AACAAACAGCTCAGCTCCATAGTCCTTGTTCTCAGGGTCAACATAAGAATCTGGAAGAAC
rJMFF037H07- AACAAACAGCTCAGCTCCATAGTCCTTGTTCTCAGGGTCAACATAAGAATCTGGAAGAAC
JMFF043C05+ AACAAACAGCTCAGCTCCATAGTCCTTGTTCTCAGGGTCAACATAAGAATCTGGAAGAAC
                      ____________________________________________________________
consensus AACAAACAGCTCAGCTCCATAGTCCTTGTTCTCAGGGTCAACATAAGAATCTGGAAGAAC
 
. : . : . : . : . : . :
rJMFF043C05- AAAGAGAACTCCAGGCAACCCTTCGAGTTTAGTGGATGTCTCTTCATCAATTTCACATCC
rJMFF037H07- AAAGAGAACTCCAGGCAACCATTCGAGTTTAGTGGATGTCTCTTCATCAATTTCACATCC
JMFF043C05+ AAAGAGAACTCCAGGCAACCCTTCGAGTTTAGTGGATGTCTCTTCATCAATTTCACATCC
JMFF037H07+ TCTTCATCAATTTCACATCC
                      ____________________________________________________________
consensus AAAGAGAACTCCAGGCAACCCTTCGAGTTTAGTGGATGTCTCTTCATCAATTTCACATCC
 
. : . : . : . : . : . :
rJMFF043C05- AAAT-CCAAAGTACCTCTCACAGGAGACATTGTATATCTTCTTCTTAGCCTCTTCTTCAC
rJMFF037H07- AAAT-CCAAAGTACCTCTCACAGGAGACATTGTATATCTTCTTCTTAGCCTCTTCTTCAC
JMFF043C05+ AAAT-CCAAAGTACCTCTCACAGGAGACATTGTATATCTTCTTCTTAGCCTCTTCTTCAC
JMFF037H07+ AAATCCCAAAGTACCTCTCACAGGAGACATTGTATATCTTCTTCTTAGCCTCTTCTTCAC
                      ____________________________________________________________
consensus AAAT-CCAAAGTACCTCTCACAGGAGACATTGTATATCTTCTTCTTAGCCTCTTCTTCAC
 
. : . : . : . : . : . :
rJMFF043C05- TTCCAACAACTTTAGCTAGTGTTTGAATGTAACAATCAATCATTTTCTGTTTGGTAGCGT
rJMFF037H07- TTCCAACAACTTTAGCTAGTGTTTGAATGTAACAATCAATCATTTTCTGTTTGGTAGCGT
JMFF043C05+ TTCCAACAACTTTAGCTAGTGTTTGAATGTAACAATCAATCATTTTCTGTTTGGTAGCGT
JMFF037H07+ TTCCAACAACTTTAGCTAGTGTTTGAATGTAACAATCAATCATTTTCTGTTTGGTAGCGT
                      ____________________________________________________________
consensus TTCCAACAACTTTAGCTAGTGTTTGAATGTAACAATCAATCATTTTCTGTTTGGTAGCGT
 
. : . : . : . : . : . :
rJMFF043C05- TTTCTCCTCCAGGCTTATCCATCACTA
rJMFF037H07- TTTCTCCTCCAGGCTTATCCATCACTATAAGCCAGTGCTCGTAGTCGCAGCCGGGAAAAA
JMFF043C05+ TTTCTCCTCCAGGCTTATCCATCACTATAAGCCAGTGCTCGTAGTCGCAGCCGGGAAAAA
JMFF037H07+ TTTCTCCTCCAGGCTTATCCATCACTATAAGCCAGTGCTCGTAGTCGCAGCCGGGAAAAA
                      ____________________________________________________________
consensus TTTCTCCTCCAGGCTTATCCATCACTATAAGCCAGTGCTCGTAGTCGCAGCCGGGAAAAA
 
. : . : . : . : . : . :
rJMFF037H07- GAGGACCTATATCGGCGGGAGGGCGGTCCCCGGAGTTAGGCCTGGAATTGAGGGGCGAGT
JMFF043C05+ GAGGACCTATATCGGCGGGAGGGCGGTCCCCGGAGTTAGGCCTGGAATTGAGGGGCGAGT
JMFF037H07+ GAGGACCTATATCGGCGGGAGGGCGGTCCCCGGAGTTAGGCCTGGAATTGAGGGGCGAGT
                      ____________________________________________________________
consensus GAGGACCTATATCGGCGGGAGGGCGGTCCCCGGAGTTAGGCCTGGAATTGAGGGGCGAGT
 
. : . : . : . : . : . :
rJMFF037H07- ANGCGGAACGGCTAGCCCTGCAGCTAATCGGACCCA
JMFF043C05+ AGGCGGAACGGCTAGCCCTGCAGCTAATCGGACCCAACCGAGCACCGCCGGGAGCGACGG
JMFF037H07+ AGGCGGAACGGCTAGCCCTGCAGCTAATCGGACCCAACCGAGCACCGCCGGGAGCGACGG
                      ____________________________________________________________
consensus AGGCGGAACGGCTAGCCCTGCAGCTAATCGGACCCAACCGAGCACCGCCGGGAGCGACGG
 
. : . : . : . : . : . :
JMFF043C05+ CCCGGAGAGACTGAGCATGAATGGAACCAGAGACATTACTTGTGAGTATAGGTAGACCAG
JMFF037H07+ CCCGGAGAGACTGAGCATGAATGGAACCAGAGACATTACTTGTGAGTATAGGTAGACCAG
                      ____________________________________________________________
consensus CCCGGAGAGACTGAGCATGAATGGAACCAGAGACATTACTTGTGAGTATAGGTAGACCAG
 
. : . : . : . : . : . :
JMFF043C05+ TTGAGAAAATCCGTTTATGAAAAATTCCTGTAGAAGTGGTCGACCGACTAGTAATTAGTG
JMFF037H07+ TTGAGAAAATCCGTTTATGAAAAATTCCTGTAGAAGTGGTCGACCGACTAGTAATTAGTG
                      ____________________________________________________________
consensus TTGAGAAAATCCGTTTATGAAAAATTCCTGTAGAAGTGGTCGACCGACTAGTAATTAGTG
 
. : . : . : . : . : . :
JMFF043C05+ AACCGGTGACAGTTACAGCTCCCGTGCCGGCCATGGTTGTAGGTTCGCCGGAGAGTAAGT
JMFF037H07+ AACCGGTGACAGTTACAGCTCCCGTGCCGGCCATGGTTGTAGGTTCGCCGGAGAGTAAGT
                      ____________________________________________________________
consensus AACCGGTGACAGTTACAGCTCCCGTGCCGGCCATGGTTGTAGGTTCGCCGGAGAGTAAGT